Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc02g024040.1 Solanum lycopersicum HOM05D001338 ORTHO05D001239 1.3e-25 119.0 62 100.0
CAN.G464.34 Capsicum annuum HOM05D001338 ORTHO05D001239 8.3e-17 89.7 61 78.7
CAN.G80.8 Capsicum annuum HOM05D001338 ORTHO05D001239 4.1e-16 87.4 61 72.1
CAN.G1005.11 Capsicum annuum HOM05D001338 ORTHO05D001239 7.0e-16 86.7 61 73.8
Solyc02g030430.1 Solanum lycopersicum HOM05D001338 ORTHO05D001239 2.0e-15 85.1 61 75.4
CANSAT54G1041 Cannabis sativa HOM05D001338 ORTHO05D001239 6.6e-14 80.1 61 63.9
CANSAT80G1687 Cannabis sativa HOM05D001338 ORTHO05D001239 6.6e-14 80.1 61 65.6
BolC2t08893H Brassica oleracea HOM05D001338 ORTHO05D001239 1.5e-13 79.0 61 68.9
Oeu018627.1 Olea europaea HOM05D001338 ORTHO05D001239 1.5e-13 79.0 61 67.2
CANSAT01G1407 Cannabis sativa HOM05D001338 ORTHO05D001239 1.9e-13 78.6 61 63.9
CANSAT54G1040 Cannabis sativa HOM05D001338 ORTHO05D001239 1.9e-13 78.6 61 62.3
HanXRQChr11g0321041 Helianthus annuus HOM05D001338 ORTHO05D001239 2.5e-13 78.2 61 62.3
CANSAT11G2147 Cannabis sativa HOM05D001338 ORTHO05D001239 3.3e-13 77.8 61 65.6
CSS0007608 Camellia sinensis var. sinensis HOM05D001338 ORTHO05D001239 5.6e-13 77.0 61 68.9
CANSAT64G0482 Cannabis sativa HOM05D001338 ORTHO05D001239 5.6e-13 77.0 61 63.9
Glyma.18G183000 Glycine max HOM05D001338 ORTHO05D001239 5.6e-13 77.0 61 62.3
Gorai.010G095100 Gossypium raimondii HOM05D001338 ORTHO05D001239 5.6e-13 77.0 61 67.2
TWI81G1066 Tripterygium wilfordii HOM05D001338 ORTHO05D001239 5.6e-13 77.0 61 65.6
CANSAT56G4418 Cannabis sativa HOM05D001338 ORTHO05D001239 9.5e-13 76.3 61 63.9
CANSAT11G1935 Cannabis sativa HOM05D001338 ORTHO05D001239 1.2e-12 75.9 61 60.7
TWI18G1324 Tripterygium wilfordii HOM05D001338 ORTHO05D001239 1.2e-12 75.9 61 65.6
TWI31G0800 Tripterygium wilfordii HOM05D001338 ORTHO05D001239 1.2e-12 75.9 61 65.6
TWI31G1167 Tripterygium wilfordii HOM05D001338 ORTHO05D001239 1.2e-12 75.9 61 65.6
TWI74G0662 Tripterygium wilfordii HOM05D001338 ORTHO05D001239 1.2e-12 75.9 61 67.2
TWI74G0957 Tripterygium wilfordii HOM05D001338 ORTHO05D001239 1.2e-12 75.9 61 65.6
Oeu018676.2 Olea europaea HOM05D001338 ORTHO05D001239 1.6e-12 75.5 61 63.9
Oeu019879.2 Olea europaea HOM05D001338 ORTHO05D001239 2.1e-12 75.1 59 64.4
Oeu046624.1 Olea europaea HOM05D001338 ORTHO05D001239 2.1e-12 75.1 57 70.2
Oeu058818.1 Olea europaea HOM05D001338 ORTHO05D001239 2.1e-12 75.1 61 65.6
CANSAT80G1793 Cannabis sativa HOM05D001338 ORTHO05D001239 3.6e-12 74.3 61 62.3
Atru.chr10.1126 Acer truncatum HOM05D001338 ORTHO05D001239 8.1e-12 73.2 61 67.2
AUR62037832 Chenopodium quinoa HOM05D001338 ORTHO05D001239 8.1e-12 73.2 60 65.0
CANSAT21G0118 Cannabis sativa HOM05D001338 ORTHO05D001239 1.1e-11 72.8 56 69.6
Thhalv10001096m.g Eutrema salsugineum HOM05D001338 ORTHO05D001239 1.1e-11 72.8 61 60.7
Thhalv10016048m.g Eutrema salsugineum HOM05D001338 ORTHO05D001239 1.1e-11 72.8 61 60.7
FvH4_4g01531 Fragaria vesca HOM05D001338 ORTHO05D001239 1.4e-11 72.4 61 57.4
SpUn0007_0210 Schrenkiella parvula HOM05D001338 ORTHO05D001239 1.4e-11 72.4 61 62.3
TPR.G34669 Trifolium pratense HOM05D001338 ORTHO05D001239 1.4e-11 72.4 61 63.9
Zm00001eb419880 Zea mays HOM05D001338 ORTHO05D001239 1.4e-11 72.4 60 58.3
Aqoxy7G02176 Aquilegia oxysepala HOM05D001338 ORTHO05D001239 1.8e-11 72.0 61 60.7
CANSAT21G2437 Cannabis sativa HOM05D001338 ORTHO05D001239 2.3e-11 71.6 56 69.6
HanXRQChr10g0286761 Helianthus annuus HOM05D001338 ORTHO05D001239 2.3e-11 71.6 60 56.7
Oeu008700.1 Olea europaea HOM05D001338 ORTHO05D001239 2.3e-11 71.6 59 61.0
PSO135G0743 Papaver somniferum HOM05D001338 ORTHO05D001239 2.3e-11 71.6 61 59.0
PSO170G3017 Papaver somniferum HOM05D001338 ORTHO05D001239 2.3e-11 71.6 61 59.0
PSO210G0436 Papaver somniferum HOM05D001338 ORTHO05D001239 2.3e-11 71.6 61 59.0
PSO339G3296 Papaver somniferum HOM05D001338 ORTHO05D001239 2.3e-11 71.6 61 59.0
PSO339G3643 Papaver somniferum HOM05D001338 ORTHO05D001239 2.3e-11 71.6 61 59.0
PSO832G2505 Papaver somniferum HOM05D001338 ORTHO05D001239 2.3e-11 71.6 61 59.0
CAN.G105.19 Capsicum annuum HOM05D001338 ORTHO05D001239 3.1e-11 71.2 48 72.9
PSO541G0488 Papaver somniferum HOM05D001338 ORTHO05D001239 3.1e-11 71.2 61 59.0
PSO384G1406 Papaver somniferum HOM05D001338 ORTHO05D001239 4.0e-11 70.9 61 62.3
PSO384G4132 Papaver somniferum HOM05D001338 ORTHO05D001239 5.2e-11 70.5 61 62.3
SpUn1024_0010 Schrenkiella parvula HOM05D001338 ORTHO05D001239 5.2e-11 70.5 62 61.3
RcHm_v2.0_Chr1g0320361 Rosa chinensis HOM05D001338 ORTHO05D001239 8.9e-11 69.7 61 57.4
Atru.chr1.2150 Acer truncatum HOM05D002861 ORTHO05D003104 1.5e-10 68.9 55 65.5
Atru.chr1.2432 Acer truncatum HOM05D001338 ORTHO05D001239 1.5e-10 68.9 66 60.6
PSO386G0185 Papaver somniferum HOM05D001338 ORTHO05D001239 2.6e-10 68.2 61 50.8
AUR62026124 Chenopodium quinoa HOM05D001338 ORTHO05D001239 3.4e-10 67.8 55 61.8
PSO063G4296 Papaver somniferum HOM05D001338 ORTHO05D001239 4.4e-10 67.4 63 60.3
Oeu056375.1 Olea europaea HOM05D001338 ORTHO05D001239 5.8e-10 67.0 48 66.7
ECA232G4407 Erigeron canadensis HOM05D001338 ORTHO05D001239 7.5e-10 66.6 60 58.3
PSO384G2524 Papaver somniferum HOM05D001338 ORTHO05D001239 7.5e-10 66.6 61 59.0
CSS0012104 Camellia sinensis var. sinensis HOM05D001338 ORTHO05D001239 1.3e-09 65.9 62 58.1
PSO675G8898 Papaver somniferum HOM05D001338 ORTHO05D001239 1.3e-09 65.9 59 61.0
PSO801G0833 Papaver somniferum HOM05D001338 ORTHO05D001239 1.3e-09 65.9 60 50.0
Oeu064199.1 Olea europaea HOM05D001338 ORTHO05D001239 1.7e-09 65.5 59 57.6
FvH4_1g08761 Fragaria vesca HOM05D001338 ORTHO05D001239 2.2e-09 65.1 61 60.7
CARHR149350 Cardamine hirsuta HOM05D001338 ORTHO05D001239 2.9e-09 64.7 61 54.1
FvH4_2g32571 Fragaria vesca HOM05D001338 ORTHO05D001239 3.7e-09 64.3 59 57.6
RcHm_v2.0_Chr7g0198811 Rosa chinensis HOM05D001338 ORTHO05D001239 4.9e-09 63.9 60 56.7
AT3G29794 Arabidopsis thaliana HOM05D001338 ORTHO05D001239 8.3e-09 63.2 61 54.1
FvH4_4g14421 Fragaria vesca HOM05D001338 ORTHO05D001239 8.3e-09 63.2 59 59.3
Glyma.14G107400 Glycine max HOM05D001338 ORTHO05D001239 8.3e-09 63.2 61 55.7
PSO541G5408 Papaver somniferum HOM05D001338 ORTHO05D001239 8.3e-09 63.2 63 57.1
TWI73G0975 Tripterygium wilfordii HOM05D001338 ORTHO05D001239 8.3e-09 63.2 66 56.1
BcaB06g28244 Brassica carinata HOM05D001338 ORTHO05D001239 1.1e-08 62.8 61 54.1
PSO063G7197 Papaver somniferum HOM05D001338 ORTHO05D001239 1.1e-08 62.8 63 54.0
PSO339G5336 Papaver somniferum HOM05D001338 ORTHO05D001239 1.1e-08 62.8 63 54.0
PSO764G0071 Papaver somniferum HOM05D001338 ORTHO05D001239 1.1e-08 62.8 63 54.0
PSO781G0024 Papaver somniferum HOM05D001338 ORTHO05D001239 1.4e-08 62.4 63 50.8
PSO170G1703 Papaver somniferum HOM05D001338 ORTHO05D001239 1.9e-08 62.0 63 50.8
PSO761G0174 Papaver somniferum HOM05D001338 ORTHO05D001239 2.4e-08 61.6 63 50.8
CSS0004687 Camellia sinensis var. sinensis HOM05D001338 ORTHO05D001239 3.2e-08 61.2 56 60.7
PSO063G6488 Papaver somniferum HOM05D001338 ORTHO05D001239 3.2e-08 61.2 63 52.4
ECA233G3047 Erigeron canadensis HOM05D001338 ORTHO05D001239 4.1e-08 60.8 60 50.0
PSO017G0847 Papaver somniferum HOM05D001338 ORTHO05D001239 4.1e-08 60.8 61 52.5
PSO144G0154 Papaver somniferum HOM05D001338 ORTHO05D001239 4.1e-08 60.8 63 52.4
PSO478G1760 Papaver somniferum HOM05D001338 ORTHO05D001239 4.1e-08 60.8 63 52.4
PSO724G1235 Papaver somniferum HOM05D001338 ORTHO05D001239 4.1e-08 60.8 61 52.5
PSO832G0537 Papaver somniferum HOM05D001338 ORTHO05D001239 5.4e-08 60.5 63 52.4
PSO104G0173 Papaver somniferum HOM05D001338 ORTHO05D001239 7.1e-08 60.1 63 49.2
Gohir.A06G101504 Gossypium hirsutum HOM05D001338 ORTHO05D001239 9.2e-08 59.7 61 57.4
PSO675G6439 Papaver somniferum HOM05D001338 ORTHO05D001239 9.2e-08 59.7 61 52.5
PSO339G3227 Papaver somniferum HOM05D001338 ORTHO05D001239 1.2e-07 59.3 63 55.6
PSO339G5254 Papaver somniferum HOM05D001338 ORTHO05D001239 1.6e-07 58.9 61 52.5
Oeu052067.1 Olea europaea HOM05D001338 ORTHO05D001239 2.1e-07 58.5 47 61.7
PSO063G6584 Papaver somniferum HOM05D001338 ORTHO05D001239 2.7e-07 58.2 63 50.8
CSS0029771 Camellia sinensis var. sinensis HOM05D001338 ORTHO05D001239 4.6e-07 57.4 56 58.9
PSO017G5137 Papaver somniferum HOM05D001338 ORTHO05D001239 7.8e-07 56.6 63 49.2
Solyc11g061950.1 Solanum lycopersicum HOM05D001338 ORTHO05D001239 7.8e-07 56.6 61 59.0
PSO210G1253 Papaver somniferum HOM05D001338 ORTHO05D001239 1.3e-06 55.8 63 49.2
CARHR289900 Cardamine hirsuta HOM05D001338 ORTHO05D001239 1.7e-06 55.5 61 47.5
FvH4_6g47641 Fragaria vesca HOM05D001338 ORTHO05D001239 5.1e-06 53.9 61 50.8
PSO063G5722 Papaver somniferum HOM05D001338 ORTHO05D001239 5.1e-06 53.9 63 47.6


User provided reference genes

Program Settings