Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc02g022880.1 Solanum lycopersicum HOM05D008892 ORTHO05D010661 1.3e-51 206.1 100 100.0
Sopen02g006500 Solanum pennellii HOM05D008892 ORTHO05D010661 3.4e-28 128.3 65 95.4
PGSC0003DMG400001138 Solanum tuberosum HOM05D008892 ORTHO05D010661 4.6e-17 91.3 85 56.5
PGSC0003DMG400041547 Solanum tuberosum HOM05D008892 ORTHO05D010661 5.6e-15 84.3 63 66.7
Solyc05g041177.1 Solanum lycopersicum HOM05D008892 ORTHO05D010661 3.7e-14 81.6 72 58.3
Solyc03g061610.1 Solanum lycopersicum HOM05D008892 ORTHO05D010661 3.2e-10 68.6 57 56.1
PGSC0003DMG400031911 Solanum tuberosum HOM05D008892 ORTHO05D010661 5.5e-10 67.8 55 61.8
COL.COLO4_34366 Corchorus olitorius HOM05D015286 ORTHO05D010661 1.8e-08 62.8 50 58.0
COL.COLO4_33233 Corchorus olitorius HOM05D015286 ORTHO05D010661 8.7e-08 60.5 50 56.0
COL.COLO4_29630 Corchorus olitorius HOM05D015286 ORTHO05D010661 4.3e-07 58.2 60 48.3
Dinv14679 Davidia involucrata HOM05D011313 ORTHO05D013316 4.3e-07 58.2 63 50.8
Dinv13764 Davidia involucrata HOM05D011313 ORTHO05D013316 9.6e-07 57.0 47 57.4
COL.COLO4_16289 Corchorus olitorius HOM05D059948 ORTHO05D010661 1.6e-06 56.2 57 49.1
Solyc01g057350.1 Solanum lycopersicum HOM05D008892 ORTHO05D010661 6.2e-06 54.3 56 48.2


User provided reference genes

Program Settings