Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc02g021390.1 Solanum lycopersicum HOM05D007533 ORTHO05D016005 2.0e-26 121.7 63 100.0
HanXRQChr09g0253411 Helianthus annuus HOM05D007533 ORTHO05D009622 2.5e-08 61.6 38 89.5
HanXRQChr16g0504431 Helianthus annuus HOM05D007533 ORTHO05D009622 2.5e-08 61.6 38 89.5
HanXRQMTg0579131 Helianthus annuus HOM05D007533 ORTHO05D009622 2.5e-08 61.6 38 89.5
Lsat_1_v5_gn_0_35060 Lactuca sativa HOM05D007533 ORTHO05D009622 2.5e-08 61.6 38 89.5
Peaxi162Scf00673g00229 Petunia axillaris HOM05D011380 ORTHO05D016005 2.5e-08 61.6 38 89.5
Solyc00g500302.1 Solanum lycopersicum HOM05D007533 ORTHO05D009622 2.5e-08 61.6 38 89.5
Solyc11g063573.1 Solanum lycopersicum HOM05D007533 ORTHO05D009622 2.5e-08 61.6 38 89.5
Nitab4.5_0010333g0150 Nicotiana tabacum HOM05D007533 ORTHO05D009622 5.5e-08 60.5 38 86.8
MSTRG.26054 Avicennia marina HOM05D007533 ORTHO05D009622 7.2e-08 60.1 38 86.8
Solyc00g500173.1 Solanum lycopersicum HOM05D007533 ORTHO05D009622 7.2e-08 60.1 38 86.8
HanXRQChr07g0189001 Helianthus annuus HOM05D007533 ORTHO05D009622 1.2e-07 59.3 38 86.8
Dinv06666 Davidia involucrata HOM05D007533 ORTHO05D009622 1.6e-07 58.9 38 86.8
Hma1.2p1_0136F.1_g062009 Hydrangea macrophylla HOM05D007533 ORTHO05D009622 1.6e-07 58.9 38 86.8
Lj2P1223T74 Lonicera japonica HOM05D007533 ORTHO05D009622 2.1e-07 58.5 38 86.8
Lj2P1226T70 Lonicera japonica HOM05D007533 ORTHO05D009622 2.1e-07 58.5 38 86.8
Lj2P1228T84 Lonicera japonica HOM05D007533 ORTHO05D009622 2.1e-07 58.5 38 86.8
Lj2P1231T101 Lonicera japonica HOM05D007533 ORTHO05D009622 2.1e-07 58.5 38 86.8
CANSAT16G0029 Cannabis sativa HOM05D007533 ORTHO05D009622 2.7e-07 58.2 38 84.2
CsaV3_UNG210000 Cucumis sativus L. HOM05D007533 ORTHO05D009622 3.6e-07 57.8 59 59.3
Aa31csc1168G30 Aethionema arabicum HOM05D007533 ORTHO05D009622 4.6e-07 57.4 38 84.2
AL9U10720 Arabidopsis lyrata HOM05D007533 ORTHO05D009622 4.6e-07 57.4 38 84.2
BolC1t03447H Brassica oleracea HOM05D007533 ORTHO05D009622 4.6e-07 57.4 38 84.2
BraSC54t46363Z Brassica rapa HOM05D007533 ORTHO05D009622 4.6e-07 57.4 38 84.2
Aqoxy12s024 Aquilegia oxysepala HOM05D007533 ORTHO05D009622 6.1e-07 57.0 38 84.2
Aqoxy1G02967 Aquilegia oxysepala HOM05D007533 ORTHO05D009622 6.1e-07 57.0 38 84.2
Aqoxy23s008 Aquilegia oxysepala HOM05D007533 ORTHO05D009622 6.1e-07 57.0 38 84.2
ATMG00640 Arabidopsis thaliana HOM05D007533 ORTHO05D009622 7.9e-07 56.6 38 81.6
DCAR_032459 Daucus carota HOM05D007533 ORTHO05D009622 7.9e-07 56.6 38 84.2
CARHR283000 Cardamine hirsuta HOM05D007533 ORTHO05D009622 1.4e-06 55.8 38 81.6
Thhalv10023156m.g Eutrema salsugineum HOM05D007533 ORTHO05D009622 1.4e-06 55.8 38 81.6
Lsat_1_v5_gn_5_43041 Lactuca sativa HOM05D007533 ORTHO05D009622 1.8e-06 55.5 38 81.6
Sed0020832 Sechium edule HOM05D007533 ORTHO05D009622 1.8e-06 55.5 59 57.6
Ah.10g028150 Amaranthus hybridus HOM05D007533 ORTHO05D009622 3.0e-06 54.7 35 85.7
Nn1g09978 Nelumbo nucifera HOM05D007533 ORTHO05D009622 3.0e-06 54.7 38 81.6
Nn1g10040 Nelumbo nucifera HOM05D007533 ORTHO05D009622 3.0e-06 54.7 38 81.6
TPR.G39970 Trifolium pratense HOM05D007533 ORTHO05D009622 3.0e-06 54.7 38 81.6
LjContig00439g0010342 Lotus japonicus HOM05D007533 ORTHO05D009622 3.9e-06 54.3 38 81.6
LjContig00439g0021951 Lotus japonicus HOM05D007533 ORTHO05D009622 3.9e-06 54.3 38 81.6
CAN.G1001.31 Capsicum annuum HOM05D007533 ORTHO05D009622 6.7e-06 53.5 38 81.6
Glyma.17G185600 Glycine max HOM05D007533 ORTHO05D009622 6.7e-06 53.5 38 78.9


User provided reference genes

Program Settings