Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc02g021020.4 Solanum lycopersicum HOM05D007101 ORTHO05D008632 4.1e-193 679.1 799 100.0
Sopen02g005320 Solanum pennellii HOM05D007101 ORTHO05D008632 5.5e-121 439.5 367 98.6
CAN.G157.9 Capsicum annuum HOM05D007101 ORTHO05D008632 7.5e-118 429.1 834 80.6
PGSC0003DMG400019836 Solanum tuberosum HOM05D007101 ORTHO05D008632 1.4e-116 424.9 367 96.2
Nitab4.5_0000526g0060 Nicotiana tabacum HOM05D007101 ORTHO05D008632 4.5e-115 419.9 819 81.3
Nitab4.5_0006710g0010 Nicotiana tabacum HOM05D007101 ORTHO05D008632 1.5e-113 414.8 819 80.8
Peaxi162Scf00818g00019 Petunia axillaris HOM05D007101 ORTHO05D008632 2.2e-106 391.0 844 76.9
CSS0049741 Camellia sinensis var. sinensis HOM05D007101 ORTHO05D008632 4.1e-76 290.4 847 69.2
Dinv41876 Davidia involucrata HOM05D007101 ORTHO05D008632 1.0e-74 285.8 366 51.1
Actinidia17999 Actinidia chinensis HOM05D007101 ORTHO05D008632 8.9e-71 272.7 366 75.7
TAR376G1071 Trochodendron aralioides HOM05D007101 ORTHO05D008632 3.4e-70 270.8 369 74.5
Rhsim01G0003500 Rhododendron simsii HOM05D007101 ORTHO05D008632 1.7e-69 268.5 838 71.6
GSVIVG01023885001 Vitis vinifera HOM05D007101 ORTHO05D008632 1.7e-69 268.5 365 74.8
CiPaw.06G116300 Carya illinoinensis HOM05D007101 ORTHO05D008632 2.9e-69 267.7 365 74.2
TWI15G0633 Tripterygium wilfordii HOM05D007101 ORTHO05D008632 1.9e-68 265.0 365 75.9
Prupe.8G178500 Prunus persica HOM05D007101 ORTHO05D008632 4.1e-68 263.8 367 73.8
QL11p055950 Quercus lobata HOM05D007101 ORTHO05D008632 5.4e-68 263.5 365 73.7
RcHm_v2.0_Chr6g0280761 Rosa chinensis HOM05D007101 ORTHO05D008632 6.0e-67 260.0 367 71.9
Duzib132G1059 Durio zibethinus HOM05D007101 ORTHO05D008632 5.1e-66 256.9 367 72.2
MD10G1139700 Malus domestica HOM05D007101 ORTHO05D008632 5.6e-65 253.4 367 73.0
Manes.11G110800 Manihot esculenta HOM05D007101 ORTHO05D008632 1.2e-64 252.3 367 71.7
FAN15G1235 Fragaria x ananassa HOM05D007101 ORTHO05D008632 2.1e-64 251.5 367 70.6
COL.COLO4_17930 Corchorus olitorius HOM05D007101 ORTHO05D008632 3.6e-64 250.8 365 72.6
SalBow1G7566 Salvia bowleyana HOM05D007101 ORTHO05D008632 3.6e-64 250.8 367 72.5
Haze_02013 Corylus avellana HOM05D007101 ORTHO05D008632 1.4e-63 248.8 365 72.1
Cfa005353 Carpinus fangiana HOM05D007101 ORTHO05D008632 1.8e-63 248.4 365 72.1
FvH4_2g16640 Fragaria vesca HOM05D007101 ORTHO05D008632 1.8e-63 248.4 367 70.3
Potri.004G205600 Populus trichocarpa HOM05D007101 ORTHO05D008632 2.4e-63 248.1 365 72.1
Sabra04G0138800 Salix brachista HOM05D007101 ORTHO05D008632 9.0e-63 246.1 367 71.1
Cpa.g.sc20.207 Carica papaya HOM05D007101 ORTHO05D008632 7.6e-62 243.0 365 71.8
SGA_v2.0_scaffold32G13346 Striga asiatica HOM05D007101 ORTHO05D008632 1.1e-60 239.2 841 68.1
MSTRG.17820 Avicennia marina HOM05D007101 ORTHO05D008632 1.4e-60 238.8 367 71.4
vmacro02332 Vaccinium macrocarpon HOM05D007101 ORTHO05D008632 4.2e-60 237.3 392 68.6
Migut.B00010 Erythranthe guttata HOM05D007101 ORTHO05D008632 1.6e-59 235.3 843 70.0
BcaB03g16462 Brassica carinata HOM05D007101 ORTHO05D008632 6.0e-59 233.4 362 70.2
Cc03_g11620 Coffea canephora HOM05D007101 ORTHO05D008632 7.8e-59 233.0 426 59.4
C07p06350 Brassica napus HOM05D007101 ORTHO05D008632 1.1e-57 229.2 362 68.2
THA.LOC104819686 Tarenaya hassleriana HOM05D007101 ORTHO05D008632 1.9e-57 228.4 362 70.2
Oeu059796.1 Olea europaea HOM05D007101 ORTHO05D008632 2.5e-57 228.0 178 62.9
Thhalv10022542m.g Eutrema salsugineum HOM05D007101 ORTHO05D008632 5.6e-57 226.9 362 67.7
PGR142G0716 Punica granatum HOM05D007101 ORTHO05D008632 3.6e-56 224.2 365 69.6
arahy.Tifrunner.gnm1.ann1.RGU3X9 Arachis hypogaea HOM05D007101 ORTHO05D008632 1.4e-55 222.2 366 68.0
Hund06163 Selenicereus undatus HOM05D007101 ORTHO05D008632 1.4e-55 222.2 365 69.0
Aqoxy6G01656 Aquilegia oxysepala HOM05D007101 ORTHO05D008632 1.8e-55 221.9 368 70.7
arahy.Tifrunner.gnm1.ann1.RR3D2P Arachis hypogaea HOM05D007101 ORTHO05D008632 6.9e-55 219.9 366 68.0
AL3G49990 Arabidopsis lyrata HOM05D007101 ORTHO05D008632 1.5e-54 218.8 362 66.9
CARHR293460 Cardamine hirsuta HOM05D007101 ORTHO05D008632 2.0e-54 218.4 362 68.2
Aa31LG8G14540 Aethionema arabicum HOM05D007101 ORTHO05D008632 2.6e-54 218.0 362 66.3
BcaC06g36224 Brassica carinata HOM05D007101 ORTHO05D008632 7.6e-54 216.5 362 66.9
A07p03990 Brassica napus HOM05D007101 ORTHO05D008632 7.6e-54 216.5 362 66.9
BolC7t41051H Brassica oleracea HOM05D007101 ORTHO05D008632 7.6e-54 216.5 362 66.9
BraA07t28190Z Brassica rapa HOM05D007101 ORTHO05D008632 7.6e-54 216.5 362 66.9
TAR629G2938 Trochodendron aralioides HOM05D007101 ORTHO05D008632 1.3e-53 215.7 180 60.0
arahy.Tifrunner.gnm1.ann1.X169V3 Arachis hypogaea HOM05D007101 ORTHO05D008632 2.9e-53 214.5 362 68.0
Glyma.08G060600 Glycine max HOM05D007101 ORTHO05D008632 3.8e-53 214.2 367 66.8
EL10Ac9g21242 Beta vulgaris HOM05D007101 ORTHO05D008632 3.2e-52 211.1 365 70.1
VMungo0251G0107 Vigna mungo HOM05D007101 ORTHO05D008632 3.2e-52 211.1 367 67.8
AUR62012916 Chenopodium quinoa HOM05D007101 ORTHO05D008632 5.4e-52 210.3 365 69.0
Sed0027220 Sechium edule HOM05D007101 ORTHO05D008632 2.1e-51 208.4 367 66.5
ClCG02G003480 Citrullus lanatus HOM05D007101 ORTHO05D008632 4.6e-51 207.2 368 66.6
AUR62027126 Chenopodium quinoa HOM05D007101 ORTHO05D008632 1.0e-50 206.1 366 68.9
Lj4g0005302 Lotus japonicus HOM05D007101 ORTHO05D008632 1.0e-50 206.1 367 65.9
CsaV3_7G001820 Cucumis sativus L. HOM05D007101 ORTHO05D008632 1.8e-50 205.3 368 66.3
MELO3C013256.2 Cucumis melo HOM05D007101 ORTHO05D008632 2.3e-50 204.9 368 65.8
Phvul.002G220400 Phaseolus vulgaris HOM05D007101 ORTHO05D008632 3.0e-50 204.5 367 66.2
Sc14g0002450 Simmondsia chinensis HOM05D007101 ORTHO05D008632 3.0e-50 204.5 365 67.7
Thecc.02G044400 Theobroma cacao HOM05D007101 ORTHO05D008632 1.1e-49 202.6 367 66.8
Ah.01g023750 Amaranthus hybridus HOM05D000564 ORTHO05D002780 1.9e-49 201.8 365 68.2
Gorai.012G159300 Gossypium raimondii HOM05D007101 ORTHO05D008632 2.5e-49 201.4 366 66.7
ECA233G4336 Erigeron canadensis HOM05D000046 ORTHO05D014757 9.6e-49 199.5 366 66.9
Eucgr.I01520 Eucalyptus grandis HOM05D007101 ORTHO05D008632 9.6e-49 199.5 367 67.3
Gohir.D04G170700 Gossypium hirsutum HOM05D007101 ORTHO05D008632 1.6e-48 198.7 365 66.6
Ca_18469_v3 Cicer arietinum L. HOM05D007101 ORTHO05D008632 1.1e-47 196.1 367 66.5
Ca_30070_v3 Cicer arietinum L. HOM05D007101 ORTHO05D008632 1.1e-47 196.1 367 66.5
Gohir.A04G125700 Gossypium hirsutum HOM05D007101 ORTHO05D008632 1.1e-47 196.1 366 66.1
AT2G17140 Arabidopsis thaliana HOM05D007101 ORTHO05D008632 6.9e-47 193.4 362 65.2
TPR.G15380 Trifolium pratense HOM05D007101 ORTHO05D008632 2.0e-46 191.8 367 67.0
Lj9A406T59 Lonicera japonica HOM05D007101 ORTHO05D008632 7.6e-46 189.9 361 67.6
Lalb_Chr05g0218081 Lupinus albus HOM05D007101 ORTHO05D008632 7.6e-46 189.9 366 65.8
Rhsim11G0197400 Rhododendron simsii HOM05D007101 ORTHO05D008632 1.1e-44 186.0 405 51.1
Ciclev10027787m.g Citrus clementina HOM05D007101 ORTHO05D008632 9.3e-44 183.0 366 60.9
Lsat_1_v5_gn_8_121281 Lactuca sativa HOM05D007101 ORTHO05D008632 1.1e-41 176.0 172 51.2
HanXRQChr12g0374451 Helianthus annuus HOM05D007101 ORTHO05D008632 1.3e-40 172.6 175 49.7
Atru.chr5.3546 Acer truncatum HOM05D007101 ORTHO05D008632 1.4e-39 169.1 291 76.6
DCAR_015659 Daucus carota HOM05D000046 ORTHO05D008632 9.0e-39 166.4 848 64.0
Carub.0003s3107 Capsella rubella HOM05D007101 ORTHO05D008632 1.7e-37 162.2 362 61.9
PSO675G0367 Papaver somniferum HOM05D007101 ORTHO05D008632 1.1e-36 159.5 365 63.6
Nn1g05331 Nelumbo nucifera HOM05D007101 ORTHO05D008632 6.0e-35 153.7 371 61.7
Os02g0132100 Oryza sativa ssp. japonica HOM05D007101 ORTHO05D008632 5.1e-34 150.6 364 60.2
unitig_32.g11014 Utricularia gibba HOM05D007101 ORTHO05D008632 2.2e-32 145.2 173 45.1
Zm00001eb209030 Zea mays HOM05D007101 ORTHO05D008632 1.2e-30 139.4 362 59.9
SHI10554 Sapria himalayana HOM05D007101 ORTHO05D008632 1.4e-28 132.5 356 60.4
Medtr4g091600 Medicago truncatula HOM05D007101 ORTHO05D008632 1.8e-26 125.6 368 54.1
FAN24G2347 Fragaria x ananassa HOM05D007101 ORTHO05D008632 5.1e-26 124.0 367 58.0
HPP92_025842 Vanilla planifolia HOM05D007101 ORTHO05D008632 2.2e-21 108.6 373 54.4
Gorai.008G096400 Gossypium raimondii HOM05D007101 ORTHO05D008632 8.5e-21 106.7 144 39.6
CDE04G2490 Ceratophyllum demersum HOM05D007101 ORTHO05D008632 4.2e-20 104.4 168 40.5
MBI06_g35039_MAGBIO Magnolia biondii HOM05D007101 ORTHO05D008632 9.4e-20 103.2 384 41.9
TAR629G1847 Trochodendron aralioides HOM05D007101 ORTHO05D008632 2.3e-18 98.6 172 43.0
ATR0618G240 Amborella trichopoda HOM05D007101 ORTHO05D008632 3.0e-18 98.2 378 52.9
Glyma.07G188700 Glycine max HOM05D007101 ORTHO05D008632 5.1e-18 97.4 178 37.1
MD05G1134600 Malus domestica HOM05D007101 ORTHO05D008632 1.1e-15 89.7 64 60.9
Sp3g30480 Schrenkiella parvula HOM05D007101 ORTHO05D008632 5.9e-14 84.0 246 71.5
MD05G1134700 Malus domestica HOM05D007101 ORTHO05D008632 1.0e-10 73.2 105 43.8
VMungo0251G1721 Vigna mungo HOM05D007101 ORTHO05D008632 1.4e-10 72.8 84 47.6
THA.LOC104807397 Tarenaya hassleriana HOM05D007101 ORTHO05D008632 6.7e-10 70.5 130 37.7
Lalb_Chr10g0104281 Lupinus albus HOM05D007545 ORTHO05D009579 5.3e-07 60.8 168 28.0


User provided reference genes

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