Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc02g014340.1 Solanum lycopersicum HOM05D002907 ORTHO05D005554 6.5e-117 424.1 217 100.0
Solyc12g038200.3 Solanum lycopersicum HOM05D002700 ORTHO05D003228 7.6e-57 224.6 127 91.3
Sopen06g010830 Solanum pennellii HOM05D002907 ORTHO05D005554 9.9e-57 224.2 127 91.3
Sopen02g003400 Solanum pennellii HOM05D002907 ORTHO05D005554 6.2e-51 204.9 116 89.7
Solyc02g044000.3 Solanum lycopersicum HOM05D002907 ORTHO05D005554 8.1e-51 204.5 171 66.1
Solyc09g150120.1 Solanum lycopersicum HOM05D002907 ORTHO05D005554 9.0e-50 201.1 115 89.6
CAN.G181.47 Capsicum annuum HOM05D002907 ORTHO05D005554 1.3e-43 180.6 157 61.1
Nitab4.5_0009770g0030 Nicotiana tabacum HOM05D002907 ORTHO05D005554 3.8e-40 169.1 124 67.7
Peaxi162Scf00635g00615 Petunia axillaris HOM05D002907 ORTHO05D005554 6.4e-40 168.3 183 51.4
Peaxi162Scf00816g00411 Petunia axillaris HOM05D002907 ORTHO05D005554 5.5e-39 165.2 129 63.6
Nitab4.5_0001916g0050 Nicotiana tabacum HOM05D002907 ORTHO05D005554 7.1e-39 164.9 154 56.5
Peaxi162Scf01370g00020 Petunia axillaris HOM05D002907 ORTHO05D005554 7.1e-39 164.9 127 64.6
Nitab4.5_0002548g0050 Nicotiana tabacum HOM05D002907 ORTHO05D005554 7.9e-38 161.4 127 63.8
Peaxi162Scf00005g02517 Petunia axillaris HOM05D002907 ORTHO05D005554 1.1e-36 157.5 126 62.7
Peaxi162Scf00386g00927 Petunia axillaris HOM05D002907 ORTHO05D005554 1.1e-36 157.5 126 62.7
CAN.G98.12 Capsicum annuum HOM05D002907 ORTHO05D005554 7.4e-36 154.8 125 61.6
Nitab4.5_0002986g0060 Nicotiana tabacum HOM05D002907 ORTHO05D005554 1.4e-34 150.6 121 62.8
Peaxi162Scf00505g00016 Petunia axillaris HOM05D002907 ORTHO05D005554 1.8e-34 150.2 146 54.1
Nitab4.5_0000162g0050 Nicotiana tabacum HOM05D002907 ORTHO05D005554 3.1e-34 149.4 146 53.4
CAN.G25.7 Capsicum annuum HOM05D002907 ORTHO05D005554 4.0e-34 149.1 114 64.0
CAN.G183.9 Capsicum annuum HOM05D002907 ORTHO05D005554 5.3e-34 148.7 115 63.5
Peaxi162Scf00203g01424 Petunia axillaris HOM05D002907 ORTHO05D005554 5.3e-34 148.7 141 59.6
Sopen08g012630 Solanum pennellii HOM05D000096 ORTHO05D000045 3.4e-33 146.0 88 88.6
CAN.G1342.3 Capsicum annuum HOM05D001433 ORTHO05D005554 6.5e-32 141.7 141 52.5
CANSAT35G0321 Cannabis sativa HOM05D002907 ORTHO05D005554 1.1e-31 141.0 120 59.2
Peaxi162Scf00297g00049 Petunia axillaris HOM05D002907 ORTHO05D005554 3.5e-30 136.0 110 60.9
CAN.G865.8 Capsicum annuum HOM05D002907 ORTHO05D005554 6.0e-30 135.2 129 55.8
Peaxi162Scf00073g02336 Petunia axillaris HOM05D002907 ORTHO05D005554 7.9e-30 134.8 123 59.3
Peaxi162Scf00661g00421 Petunia axillaris HOM05D002907 ORTHO05D005554 7.9e-30 134.8 123 59.3
CANSAT56G3687 Cannabis sativa HOM05D002907 ORTHO05D005554 1.9e-28 130.2 111 59.5
PGSC0003DMG400039849 Solanum tuberosum HOM05D002907 ORTHO05D005554 4.3e-28 129.0 128 50.0
Sopen09g023780 Solanum pennellii HOM05D002907 ORTHO05D005554 1.6e-27 127.1 163 42.9
Sopen11g022000 Solanum pennellii HOM05D002907 ORTHO05D005554 1.6e-27 127.1 163 42.9
CANSAT01G2740 Cannabis sativa HOM05D002907 ORTHO05D005554 2.8e-27 126.3 108 60.2
Solyc11g044605.1 Solanum lycopersicum HOM05D002907 ORTHO05D005554 3.7e-27 125.9 124 61.3
Nitab4.5_0000051g0020 Nicotiana tabacum HOM05D002907 ORTHO05D005554 4.8e-27 125.6 129 54.3
CANSAT78G0666 Cannabis sativa HOM05D002907 ORTHO05D005554 1.8e-26 123.6 126 49.2
Nitab4.5_0000359g0030 Nicotiana tabacum HOM05D002907 ORTHO05D005554 6.9e-26 121.7 116 56.0
PGSC0003DMG400042496 Solanum tuberosum HOM05D002907 ORTHO05D005554 1.2e-25 120.9 113 53.1
CAN.G665.22 Capsicum annuum HOM05D002907 ORTHO05D005554 1.5e-25 120.6 160 45.6
Nitab4.5_0026714g0010 Nicotiana tabacum HOM05D002907 ORTHO05D005554 2.0e-25 120.2 128 53.9
Solyc07g017280.3 Solanum lycopersicum HOM05D002907 ORTHO05D005554 2.0e-25 120.2 182 41.8
CANSAT25G3758 Cannabis sativa HOM05D002907 ORTHO05D005554 2.2e-24 116.7 114 53.5
Solyc08g028810.1 Solanum lycopersicum HOM05D002907 ORTHO05D005554 3.2e-23 112.8 173 35.8
Solyc10g050400.1 Solanum lycopersicum HOM05D002907 ORTHO05D005554 3.2e-23 112.8 133 43.6
Nitab4.5_0000011g0020 Nicotiana tabacum HOM05D002907 ORTHO05D005554 4.2e-23 112.5 124 50.8
CAN.G542.9 Capsicum annuum HOM05D002907 ORTHO05D005554 3.6e-22 109.4 101 54.5
DCAR_020135 Daucus carota HOM05D002907 ORTHO05D005554 7.9e-22 108.2 111 48.6
DCAR_009226 Daucus carota HOM05D000033 ORTHO05D000913 1.3e-21 107.5 116 46.6
Sopen01g012720 Solanum pennellii HOM05D002907 ORTHO05D005554 1.8e-21 107.1 137 40.9
Sopen10g024010 Solanum pennellii HOM05D002907 ORTHO05D005554 3.0e-21 106.3 109 49.5
Nitab4.5_0000164g0020 Nicotiana tabacum HOM05D002907 ORTHO05D005554 5.7e-20 102.1 220 35.0
Solyc10g074430.2 Solanum lycopersicum HOM05D002907 ORTHO05D005554 1.3e-19 100.9 104 49.0
Peaxi162Scf00431g00511 Petunia axillaris HOM05D002907 ORTHO05D005554 1.6e-19 100.5 87 59.8
Solyc10g050370.2 Solanum lycopersicum HOM05D002907 ORTHO05D005554 1.6e-19 100.5 110 47.3
DCAR_027158 Daucus carota HOM05D002907 ORTHO05D005554 2.2e-19 100.1 120 45.8
DCAR_024022 Daucus carota HOM05D002907 ORTHO05D005554 4.8e-19 99.0 134 41.0
Nitab4.5_0000037g0120 Nicotiana tabacum HOM05D002907 ORTHO05D005554 6.3e-19 98.6 78 66.7
Peaxi162Scf00871g00034 Petunia axillaris HOM05D002907 ORTHO05D005554 1.4e-18 97.4 234 33.8
DCAR_015940 Daucus carota HOM05D002907 ORTHO05D005554 2.4e-18 96.7 120 38.3
Nitab4.5_0002746g0010 Nicotiana tabacum HOM05D002907 ORTHO05D005554 3.1e-18 96.3 114 46.5
Solyc12g038810.3 Solanum lycopersicum HOM05D000088 ORTHO05D017758 5.9e-17 92.0 53 86.8
DCAR_029864 Daucus carota HOM05D002907 ORTHO05D005554 1.7e-16 90.5 127 37.0
Solyc06g034070.3 Solanum lycopersicum HOM05D002907 ORTHO05D005554 2.2e-16 90.1 51 92.2
DCAR_010335 Daucus carota HOM05D002907 ORTHO05D005554 3.8e-16 89.4 127 38.6
Nitab4.5_0000248g0100 Nicotiana tabacum HOM05D002907 ORTHO05D005554 5.0e-16 89.0 105 51.4
Solyc02g055537.1 Solanum lycopersicum HOM05D002907 ORTHO05D005554 4.2e-15 85.9 55 80.0
Solyc10g054270.3 Solanum lycopersicum HOM05D002907 ORTHO05D005554 3.0e-13 79.7 102 46.1
Solyc05g018860.1 Solanum lycopersicum HOM05D002907 ORTHO05D005554 8.8e-13 78.2 117 37.6
Peaxi162Scf00168g01413 Petunia axillaris HOM05D002907 ORTHO05D005554 1.5e-12 77.4 72 58.3
Nitab4.5_0002746g0020 Nicotiana tabacum HOM05D002907 ORTHO05D005554 2.6e-12 76.6 78 52.6
Sopen01g015020 Solanum pennellii HOM05D002907 ORTHO05D005554 4.4e-12 75.9 159 33.3
Nitab4.5_0001245g0050 Nicotiana tabacum HOM05D002907 ORTHO05D000065 1.7e-11 73.9 46 76.1
Sopen10g024140 Solanum pennellii HOM05D028602 ORTHO05D005554 2.2e-11 73.6 68 57.4
Sopen10g024080 Solanum pennellii HOM05D028602 ORTHO05D005554 3.7e-11 72.8 68 57.4
Nitab4.5_0001878g0070 Nicotiana tabacum HOM05D002907 ORTHO05D005554 1.1e-10 71.2 121 42.1
Nitab4.5_0005521g0020 Nicotiana tabacum HOM05D002907 ORTHO05D005554 1.4e-10 70.9 115 38.3
CAN.G419.24 Capsicum annuum HOM05D002907 ORTHO05D005554 1.8e-10 70.5 79 50.6
Solyc11g032020.1 Solanum lycopersicum HOM05D002907 ORTHO05D000065 2.4e-10 70.1 41 82.9
QL93p0160_0004 Quercus lobata HOM05D002907 ORTHO05D000065 1.5e-09 67.4 128 30.5
DCAR_030300 Daucus carota HOM05D002907 ORTHO05D005554 2.0e-09 67.0 104 33.7
DCAR_030301 Daucus carota HOM05D002907 ORTHO05D005554 2.0e-09 67.0 104 33.7
Nitab4.5_0000488g0190 Nicotiana tabacum HOM05D002907 ORTHO05D005554 2.0e-09 67.0 106 41.5
Solyc02g014410.1 Solanum lycopersicum HOM05D002907 ORTHO05D005554 3.4e-09 66.2 74 41.9
Hma1.2p1_0006F.1_g004680 Hydrangea macrophylla HOM05D000096 ORTHO05D000045 4.5e-09 65.9 142 30.3
CAN.G660.34 Capsicum annuum HOM05D002907 ORTHO05D005554 7.7e-09 65.1 96 43.8
Nitab4.5_0008853g0020 Nicotiana tabacum HOM05D002907 ORTHO05D005554 1.3e-08 64.3 95 40.0
Aqoxy3G01099 Aquilegia oxysepala HOM05D002907 ORTHO05D005554 3.8e-08 62.8 147 30.6
Aqoxy5G02850 Aquilegia oxysepala HOM05D002907 ORTHO05D005554 3.8e-08 62.8 147 32.0
QL06p039579 Quercus lobata HOM05D002907 ORTHO05D000065 3.8e-08 62.8 138 29.7
Aqoxy4G01036 Aquilegia oxysepala HOM05D000100 ORTHO05D000052 5.0e-08 62.4 147 31.3
Aqoxy4G01459 Aquilegia oxysepala HOM05D002907 ORTHO05D000174 6.5e-08 62.0 105 37.1
Aqoxy5G02969 Aquilegia oxysepala HOM05D002907 ORTHO05D005554 6.5e-08 62.0 105 37.1
QL07p005779 Quercus lobata HOM05D002907 ORTHO05D005554 6.5e-08 62.0 138 30.4
QL07p006362 Quercus lobata HOM05D002907 ORTHO05D005554 6.5e-08 62.0 138 30.4
Aqoxy3G02886 Aquilegia oxysepala HOM05D003414 ORTHO05D003913 1.1e-07 61.2 103 38.8
Aqoxy1G02051 Aquilegia oxysepala HOM05D002907 ORTHO05D005554 1.4e-07 60.8 103 36.9
QL05p044516 Quercus lobata HOM05D002907 ORTHO05D000065 1.4e-07 60.8 103 32.0
QL93p0100_0313 Quercus lobata HOM05D000038 ORTHO05D000612 1.4e-07 60.8 103 32.0
TWI14G1065 Tripterygium wilfordii HOM05D002907 ORTHO05D000065 1.4e-07 60.8 106 36.8
TWI77G0313 Tripterygium wilfordii HOM05D002907 ORTHO05D000065 1.4e-07 60.8 106 36.8
Sopen05g018840 Solanum pennellii HOM05D002907 ORTHO05D005554 2.5e-07 60.1 81 39.5
TWI79G1688 Tripterygium wilfordii HOM05D002907 ORTHO05D005554 3.2e-07 59.7 124 32.3
Aqoxy109s001 Aquilegia oxysepala HOM05D000494 ORTHO05D005554 1.2e-06 57.8 103 35.0
CAN.G181.45 Capsicum annuum HOM05D002907 ORTHO05D005554 1.2e-06 57.8 122 36.9
Aqoxy2G00023 Aquilegia oxysepala HOM05D002907 ORTHO05D013727 2.1e-06 57.0 103 35.0
QL01p044581 Quercus lobata HOM05D002907 ORTHO05D005554 3.6e-06 56.2 119 29.4


User provided reference genes

Program Settings