Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc02g011995.1 Solanum lycopersicum HOM05D008622 ORTHO05D010757 1.5e-53 212.6 106 100.0
Nitab4.5_0004864g0050 Nicotiana tabacum HOM05D000540 ORTHO05D000681 1.5e-21 106.3 75 76.0
Peaxi162Scf00110g00044 Petunia axillaris HOM05D008622 ORTHO05D010757 7.5e-18 94.0 52 88.5
CAN.G612.10 Capsicum annuum HOM05D008622 ORTHO05D010757 9.8e-18 93.6 52 88.5
CAN.G877.8 Capsicum annuum HOM05D008622 ORTHO05D010757 9.8e-18 93.6 52 88.5
Gorai.001G180700 Gossypium raimondii HOM05D008622 ORTHO05D010757 6.0e-15 84.3 94 54.3
Gohir.1Z050166 Gossypium hirsutum HOM05D008622 ORTHO05D010757 1.0e-14 83.6 52 80.8
Migut.H01168 Erythranthe guttata HOM05D008622 ORTHO05D010757 2.3e-14 82.4 52 76.9
Nn020s41492 Nelumbo nucifera HOM05D008622 ORTHO05D010757 2.3e-14 82.4 47 85.1
Gohir.A12G078500 Gossypium hirsutum HOM05D008622 ORTHO05D010757 5.1e-14 81.3 52 78.8
Gohir.D08G095680 Gossypium hirsutum HOM05D008622 ORTHO05D010757 5.1e-14 81.3 52 78.8
Gohir.D06G105260 Gossypium hirsutum HOM05D008622 ORTHO05D010757 1.5e-13 79.7 52 75.0
PSO548G0027 Papaver somniferum HOM05D008622 ORTHO05D010757 1.5e-13 79.7 52 76.9
PGR111G0016 Punica granatum HOM05D008622 ORTHO05D010757 4.3e-13 78.2 52 73.1
LjContig00489g0025793 Lotus japonicus HOM05D008622 ORTHO05D010757 1.2e-12 76.6 52 76.9
Sed0001678 Sechium edule HOM05D008622 ORTHO05D010757 1.2e-12 76.6 47 78.7
Sed0011032 Sechium edule HOM05D008622 ORTHO05D010757 1.2e-12 76.6 47 78.7
Sed0018360 Sechium edule HOM05D008622 ORTHO05D010757 1.2e-12 76.6 47 78.7
DCAR_032466 Daucus carota HOM05D008622 ORTHO05D010757 8.1e-12 73.9 41 85.4
C06p21400 Brassica napus HOM05D008622 ORTHO05D010757 5.2e-11 71.2 52 67.3
BolSC37t60776H Brassica oleracea HOM05D008622 ORTHO05D010757 5.2e-11 71.2 52 67.3
BolSC45t60930H Brassica oleracea HOM05D008622 ORTHO05D010757 5.2e-11 71.2 52 67.3
BraSC25t45888Z Brassica rapa HOM05D008622 ORTHO05D010757 5.2e-11 71.2 52 67.3
BraSC59t46518Z Brassica rapa HOM05D008622 ORTHO05D010757 5.2e-11 71.2 52 67.3
MELO3C028501.2 Cucumis melo HOM05D008622 ORTHO05D010757 8.9e-11 70.5 38 89.5
Glyma.16G088900 Glycine max HOM05D008622 ORTHO05D010757 8.9e-11 70.5 53 67.9
Nitab4.5_0016174g0030 Nicotiana tabacum HOM05D001325 ORTHO05D001540 2.6e-10 68.9 46 76.1
Sed0025419 Sechium edule HOM05D008622 ORTHO05D010757 2.6e-10 68.9 45 73.3
ClCG00G002380 Citrullus lanatus HOM05D008622 ORTHO05D010757 6.4e-09 64.3 35 88.6
HanXRQChr00c0496g0575161 Helianthus annuus HOM05D008622 ORTHO05D010757 6.4e-09 64.3 40 80.0
CiPaw.01G059700 Carya illinoinensis HOM05D008622 ORTHO05D010757 1.4e-08 63.2 47 66.0
LjContig00318g0003846 Lotus japonicus HOM05D008622 ORTHO05D010757 1.4e-08 63.2 43 69.8
CiPaw.06G085000 Carya illinoinensis HOM05D008622 ORTHO05D010757 1.9e-08 62.8 50 64.0
Thhalv10028241m.g Eutrema salsugineum HOM05D008622 ORTHO05D010757 1.9e-08 62.8 43 69.8
Nn4g25758 Nelumbo nucifera HOM05D008622 ORTHO05D010757 1.9e-08 62.8 39 76.9
CARHR281850 Cardamine hirsuta HOM05D008622 ORTHO05D010757 4.1e-08 61.6 42 69.0
Gorai.012G044100 Gossypium raimondii HOM05D008622 ORTHO05D010757 1.6e-07 59.7 36 77.8
Aa31csc39G210 Aethionema arabicum HOM05D008622 ORTHO05D010757 6.0e-07 57.8 45 71.1
ATCG00050 Arabidopsis thaliana HOM05D008622 ORTHO05D010757 1.0e-06 57.0 42 64.3


User provided reference genes

Program Settings