Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc02g011770.1 Solanum lycopersicum HOM05D007371 ORTHO05D009319 6.5e-91 337.4 177 100.0
CAN.G1526.6 Capsicum annuum HOM05D007371 ORTHO05D009319 3.2e-77 292.0 177 88.7
CAN.G278.2 Capsicum annuum HOM05D007371 ORTHO05D009319 3.2e-77 292.0 177 88.7
CAN.G939.5 Capsicum annuum HOM05D007371 ORTHO05D009319 3.2e-77 292.0 177 88.7
CAN.G965.5 Capsicum annuum HOM05D007371 ORTHO05D009319 9.5e-74 280.4 177 85.3
DCAR_032539 Daucus carota HOM05D007371 ORTHO05D009319 1.8e-72 276.2 177 81.9
Solyc03g013600.1 Solanum lycopersicum HOM05D007371 ORTHO05D009319 5.2e-72 274.6 177 84.7
Lj2P1238T112 Lonicera japonica HOM05D007371 ORTHO05D009319 2.2e-70 269.2 177 80.8
Lju5009P0T52 Lonicera japonica HOM05D007371 ORTHO05D009319 2.2e-70 269.2 177 80.8
Migut.D01251 Erythranthe guttata HOM05D007371 ORTHO05D009319 8.3e-70 267.3 177 80.8
SalBow1G7973 Salvia bowleyana HOM05D007371 ORTHO05D009319 8.3e-70 267.3 177 79.7
Lj9P89T22 Lonicera japonica HOM05D007371 ORTHO05D009319 1.4e-69 266.5 177 80.2
Nn064s42209 Nelumbo nucifera HOM05D007371 ORTHO05D009319 4.1e-69 265.0 177 79.7
RcHm_v2.0_Chr5g0017201 Rosa chinensis HOM05D007371 ORTHO05D009319 9.2e-69 263.8 177 79.7
RcHm_v2.0_CPg0502761 Rosa chinensis HOM05D007371 ORTHO05D009319 9.2e-69 263.8 177 79.7
Gohir.1Z049431 Gossypium hirsutum HOM05D007371 ORTHO05D009319 1.2e-68 263.5 177 79.1
Gohir.1Z049679 Gossypium hirsutum HOM05D007371 ORTHO05D009319 1.2e-68 263.5 177 79.1
Gohir.A02G134600 Gossypium hirsutum HOM05D007371 ORTHO05D009319 1.2e-68 263.5 177 79.1
Lalb_Chr07g0191781 Lupinus albus HOM05D007371 ORTHO05D009319 2.0e-68 262.7 177 78.5
Peaxi162Scf00338g00628 Petunia axillaris HOM05D007371 ORTHO05D009319 2.0e-68 262.7 177 81.4
PGR111G0032 Punica granatum HOM05D007371 ORTHO05D009319 7.8e-68 260.8 177 78.5
RcHm_v2.0_Chr5g0043021 Rosa chinensis HOM05D007371 ORTHO05D009319 1.0e-67 260.4 177 78.5
Nn3g20215 Nelumbo nucifera HOM05D007371 ORTHO05D009319 1.3e-67 260.0 177 78.5
Gohir.A09G046246 Gossypium hirsutum HOM05D007371 ORTHO05D009319 3.0e-67 258.8 177 78.0
HanXRQChr00c0289g0573141 Helianthus annuus HOM05D007371 ORTHO05D009319 5.0e-67 258.1 177 78.5
HanXRQChr02g0059721 Helianthus annuus HOM05D007371 ORTHO05D009319 5.0e-67 258.1 177 78.5
HanXRQChr09g0258501 Helianthus annuus HOM05D007371 ORTHO05D009319 5.0e-67 258.1 177 78.5
HanXRQChr15g0465431 Helianthus annuus HOM05D007371 ORTHO05D009319 5.0e-67 258.1 177 78.5
HanXRQChr15g0465461 Helianthus annuus HOM05D007371 ORTHO05D009319 5.0e-67 258.1 177 78.5
HanXRQChr17g0569751 Helianthus annuus HOM05D007371 ORTHO05D009319 5.0e-67 258.1 177 78.5
HanXRQCPg0580341 Helianthus annuus HOM05D007371 ORTHO05D009319 5.0e-67 258.1 177 78.5
Medtr4g006110 Medicago truncatula HOM05D007371 ORTHO05D009319 1.5e-66 256.5 176 77.3
Medtr7g021710 Medicago truncatula HOM05D007371 ORTHO05D009319 5.6e-66 254.6 176 76.7
Medtr6g042220 Medicago truncatula HOM05D007371 ORTHO05D009319 9.5e-66 253.8 177 76.8
TAR625G0296 Trochodendron aralioides HOM05D007371 ORTHO05D009319 2.3e-64 249.2 177 75.1
PSO548G0046 Papaver somniferum HOM05D007371 ORTHO05D009319 3.1e-64 248.8 177 74.0
C09p24650 Brassica napus HOM05D007371 ORTHO05D009319 4.4e-63 245.0 177 74.0
C09p40180 Brassica napus HOM05D007371 ORTHO05D009319 4.4e-63 245.0 177 74.0
BolC2t10597H Brassica oleracea HOM05D007371 ORTHO05D009319 4.4e-63 245.0 177 74.0
BolSC29t60507H Brassica oleracea HOM05D007371 ORTHO05D009319 4.4e-63 245.0 177 74.0
BolSC29t60622H Brassica oleracea HOM05D007371 ORTHO05D009319 4.4e-63 245.0 177 74.0
BolSC37t60794H Brassica oleracea HOM05D007371 ORTHO05D009319 4.4e-63 245.0 177 74.0
BolSC47t61064H Brassica oleracea HOM05D007371 ORTHO05D009319 4.4e-63 245.0 177 74.0
BraA10t43431Z Brassica rapa HOM05D007371 ORTHO05D009319 4.4e-63 245.0 177 74.0
BraSC103t45430Z Brassica rapa HOM05D007371 ORTHO05D009319 4.4e-63 245.0 177 74.0
BraSC179t45773Z Brassica rapa HOM05D007371 ORTHO05D009319 4.4e-63 245.0 177 74.0
BraSC59t46552Z Brassica rapa HOM05D007371 ORTHO05D009319 4.4e-63 245.0 177 74.0
Medtr5g063410 Medicago truncatula HOM05D007371 ORTHO05D009319 2.2e-62 242.7 176 75.6
ATCG01080 Arabidopsis thaliana HOM05D007371 ORTHO05D009319 2.9e-62 242.3 177 72.3
CARHR282450 Cardamine hirsuta HOM05D007371 ORTHO05D009319 1.9e-61 239.6 177 72.3
AL9U11956 Arabidopsis lyrata HOM05D007371 ORTHO05D009319 4.1e-61 238.4 177 71.8
Gohir.D04G175100 Gossypium hirsutum HOM05D007371 ORTHO05D009319 7.8e-60 234.2 153 79.1
BolC9t56922H Brassica oleracea HOM05D007371 ORTHO05D009319 1.3e-59 233.4 177 69.5
HanXRQChr17g0569721 Helianthus annuus HOM05D007371 ORTHO05D009319 2.3e-59 232.6 162 77.2
Nn1g08633 Nelumbo nucifera HOM05D007371 ORTHO05D009319 4.3e-58 228.4 153 77.1
CAN.G256.22 Capsicum annuum HOM05D007371 ORTHO05D009319 1.1e-56 223.8 141 85.1
Solyc07g026910.3 Solanum lycopersicum HOM05D007371 ORTHO05D009319 1.2e-55 220.3 137 87.6
Gohir.D12G089301 Gossypium hirsutum HOM05D007371 ORTHO05D009319 4.1e-53 211.8 150 76.0
Gohir.D06G133700 Gossypium hirsutum HOM05D007371 ORTHO05D009319 5.4e-45 184.9 161 66.5
CAN.G262.7 Capsicum annuum HOM05D007371 ORTHO05D009319 3.5e-44 182.2 119 83.2
Glyma.19G081000 Glycine max HOM05D007371 ORTHO05D009319 4.6e-44 181.8 129 76.0
BraSC143t45659Z Brassica rapa HOM05D007371 ORTHO05D009319 2.6e-39 166.0 123 72.4
Potri.013G075100 Populus trichocarpa HOM05D007371 ORTHO05D009319 3.8e-38 162.2 116 71.6
Medtr0002s0160 Medicago truncatula HOM05D000533 ORTHO05D006151 6.0e-36 154.8 117 68.4
Nn031s41614 Nelumbo nucifera HOM05D007371 ORTHO05D009319 1.3e-35 153.7 99 76.8
Nitab4.5_0007979g0070 Nicotiana tabacum HOM05D007371 ORTHO05D009319 3.9e-35 152.1 180 55.0
HanXRQChr00c0336g0573671 Helianthus annuus HOM05D007371 ORTHO05D009319 5.1e-35 151.8 99 76.8
BolSC45t60908H Brassica oleracea HOM05D007371 ORTHO05D009319 2.8e-33 146.0 108 72.2
Thecc.08G131100 Theobroma cacao HOM05D007371 ORTHO05D009319 4.8e-33 145.2 99 73.7
BolSC29t60547H Brassica oleracea HOM05D007371 ORTHO05D009319 1.4e-32 143.7 107 72.0
BolSC35t60691H Brassica oleracea HOM05D007371 ORTHO05D009319 1.4e-32 143.7 107 72.0
BolSC46t60957H Brassica oleracea HOM05D007371 ORTHO05D009319 1.4e-32 143.7 107 72.0
BolSC56t61236H Brassica oleracea HOM05D007371 ORTHO05D009319 1.4e-32 143.7 107 72.0
Gohir.A03G146201 Gossypium hirsutum HOM05D007371 ORTHO05D009319 1.8e-32 143.3 163 52.8
Gorai.013G109900 Gossypium raimondii HOM05D007371 ORTHO05D009319 1.7e-30 136.7 98 73.5
BolSC35t60705H Brassica oleracea HOM05D007371 ORTHO05D009319 2.2e-30 136.3 99 70.7
BolSC49t61144H Brassica oleracea HOM05D007371 ORTHO05D009319 1.1e-29 134.0 99 72.7
Solyc11g021217.1 Solanum lycopersicum HOM05D007371 ORTHO05D009319 7.1e-29 131.3 90 81.1
C02p24280 Brassica napus HOM05D007371 ORTHO05D009319 9.3e-29 131.0 128 56.2
HanXRQChr01g0000251 Helianthus annuus HOM05D007371 ORTHO05D009319 9.3e-29 131.0 160 54.4
Gorai.005G189900 Gossypium raimondii HOM05D007371 ORTHO05D009319 1.6e-28 130.2 94 69.1
BraSC25t45911Z Brassica rapa HOM05D007371 ORTHO05D009319 2.1e-28 129.8 93 69.9
Hma1.2p1_0656F.1_g196806 Hydrangea macrophylla HOM05D007371 ORTHO05D009319 2.3e-27 126.3 83 84.3
C09p40330 Brassica napus HOM05D007371 ORTHO05D009319 1.9e-26 123.2 100 68.0
BolC2t10612H Brassica oleracea HOM05D007371 ORTHO05D009319 1.9e-26 123.2 84 78.6
Gohir.D02G169550 Gossypium hirsutum HOM05D007371 ORTHO05D009319 2.5e-26 122.9 96 65.6
HanXRQChr05g0152451 Helianthus annuus HOM05D007371 ORTHO05D009319 7.4e-26 121.3 74 77.0
HanXRQChr08g0211951 Helianthus annuus HOM05D007371 ORTHO05D009319 7.4e-26 121.3 74 77.0
Gohir.D07G194033 Gossypium hirsutum HOM05D007371 ORTHO05D009319 1.1e-24 117.5 76 78.9
BraSC138t45534Z Brassica rapa HOM05D007371 ORTHO05D009319 1.8e-24 116.7 109 63.3
arahy.Tifrunner.gnm1.ann1.5E4H9C Arachis hypogaea HOM05D007371 ORTHO05D009319 2.9e-22 109.4 90 67.8
arahy.Tifrunner.gnm1.ann1.UDKX9E Arachis hypogaea HOM05D000890 ORTHO05D000697 2.9e-22 109.4 70 72.9
HanXRQChr00c0703g0576941 Helianthus annuus HOM05D007371 ORTHO05D009319 1.1e-21 107.5 75 81.3
arahy.Tifrunner.gnm1.ann1.4VL02K Arachis hypogaea HOM05D001200 ORTHO05D009778 1.0e-19 100.9 74 71.6
arahy.Tifrunner.gnm1.ann1.9I8ZI2 Arachis hypogaea HOM05D001200 ORTHO05D009778 1.0e-19 100.9 74 71.6
arahy.Tifrunner.gnm1.ann1.V71EA1 Arachis hypogaea HOM05D001200 ORTHO05D009778 1.0e-19 100.9 74 71.6
BraSC58t46462Z Brassica rapa HOM05D007371 ORTHO05D009319 1.3e-19 100.5 75 65.3
RcHm_v2.0_Chr4g0438011 Rosa chinensis HOM05D007371 ORTHO05D009319 1.8e-19 100.1 66 78.8
HanXRQChr02g0037971 Helianthus annuus HOM05D007371 ORTHO05D009319 3.1e-16 89.4 83 63.9
Lalb_Chr09g0335451 Lupinus albus HOM05D007371 ORTHO05D009319 6.9e-16 88.2 65 72.3
SMO086G0016 Selaginella moellendorffii HOM05D007371 ORTHO05D009319 3.8e-14 82.4 176 40.3
HanXRQChr11g0323761 Helianthus annuus HOM05D007371 ORTHO05D009319 6.5e-14 81.6 81 65.4
BolC7t43856H Brassica oleracea HOM05D007371 ORTHO05D009319 2.5e-13 79.7 56 69.6
Mapoly0048s0040 Marchantia polymorpha HOM05D007371 ORTHO05D009319 1.8e-11 73.6 99 43.4
Lsat_1_v5_gn_6_54121 Lactuca sativa HOM05D007371 ORTHO05D009319 1.9e-10 70.1 56 71.4
Aa31LG5G21710 Aethionema arabicum HOM05D007371 ORTHO05D009319 4.3e-10 68.9 84 58.3
Lalb_Chr11g0071331 Lupinus albus HOM05D007371 ORTHO05D009319 1.1e-08 64.3 70 55.7
HanXRQChr02g0038001 Helianthus annuus HOM05D007371 ORTHO05D009319 3.1e-08 62.8 61 60.7
CsaV3_UNG210150 Cucumis sativus L. HOM05D001200 ORTHO05D009713 9.0e-08 61.2 45 71.1
Haze_02268 Corylus avellana HOM05D007371 ORTHO05D009319 2.6e-07 59.7 43 74.4
Hund24330 Selenicereus undatus HOM05D007371 ORTHO05D009319 2.2e-06 56.6 47 57.4


User provided reference genes

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