Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc02g011740.1 Solanum lycopersicum HOM05D001200 ORTHO05D010401 2.1e-36 155.2 81 100.0
CAN.G95.10 Capsicum annuum HOM05D001200 ORTHO05D002731 5.8e-18 94.0 80 65.0
PGSC0003DMG400020539 Solanum tuberosum HOM05D001200 ORTHO05D002731 1.4e-16 89.4 135 45.2
PGSC0003DMG401011339 Solanum tuberosum HOM05D001200 ORTHO05D002731 1.4e-16 89.4 135 45.2
Nn064s42212 Nelumbo nucifera HOM05D001200 ORTHO05D002731 5.0e-14 80.9 135 40.7
Peaxi162Scf00030g02118 Petunia axillaris HOM05D001200 ORTHO05D002731 6.6e-14 80.5 129 43.4
SalBow1G7634 Salvia bowleyana HOM05D001200 ORTHO05D002731 2.5e-13 78.6 135 40.7
CAN.G386.25 Capsicum annuum HOM05D001200 ORTHO05D010401 3.3e-13 78.2 51 80.4
Lj2P1238T97 Lonicera japonica HOM05D001200 ORTHO05D002731 4.3e-13 77.8 135 38.5
Peaxi162Scf01164g00035 Petunia axillaris HOM05D001200 ORTHO05D002731 4.3e-13 77.8 129 41.9
EL10As15g24100 Beta vulgaris HOM05D001200 ORTHO05D002731 5.6e-13 77.4 135 39.3
EL10As15g24137 Beta vulgaris HOM05D001200 ORTHO05D002731 5.6e-13 77.4 135 39.3
BcaC03g16699 Brassica carinata HOM05D001200 ORTHO05D002731 1.2e-12 76.3 135 40.0
C09p24620 Brassica napus HOM05D001200 ORTHO05D002731 1.2e-12 76.3 135 40.0
BolSC29t60504H Brassica oleracea HOM05D001200 ORTHO05D002731 1.2e-12 76.3 135 40.0
BolSC35t60702H Brassica oleracea HOM05D001200 ORTHO05D002731 1.2e-12 76.3 135 40.0
BolSC37t60791H Brassica oleracea HOM05D001200 ORTHO05D002731 1.2e-12 76.3 135 40.0
BraSC179t45776Z Brassica rapa HOM05D001200 ORTHO05D002731 1.2e-12 76.3 135 40.0
BraSC59t46549Z Brassica rapa HOM05D001200 ORTHO05D002731 1.2e-12 76.3 135 40.0
DCAR_032536 Daucus carota HOM05D001200 ORTHO05D002731 2.8e-12 75.1 134 38.1
CARHR282420 Cardamine hirsuta HOM05D001200 ORTHO05D002731 1.4e-11 72.8 135 39.3
HanXRQChr00c0196g0572481 Helianthus annuus HOM05D001200 ORTHO05D002731 1.4e-11 72.8 135 37.0
HanXRQChr00c0690g0576761 Helianthus annuus HOM05D001200 ORTHO05D002731 1.4e-11 72.8 135 37.0
HanXRQChr02g0059711 Helianthus annuus HOM05D001200 ORTHO05D002731 1.4e-11 72.8 135 37.0
HanXRQChr05g0152431 Helianthus annuus HOM05D001200 ORTHO05D002731 1.4e-11 72.8 135 37.0
HanXRQChr06g0183001 Helianthus annuus HOM05D001200 ORTHO05D002731 1.4e-11 72.8 135 37.0
HanXRQChr09g0258521 Helianthus annuus HOM05D001200 ORTHO05D002731 1.4e-11 72.8 135 37.0
HanXRQChr11g0323741 Helianthus annuus HOM05D001200 ORTHO05D002731 1.4e-11 72.8 135 37.0
HanXRQCPg0580351 Helianthus annuus HOM05D001200 ORTHO05D002731 1.4e-11 72.8 135 37.0
BolSC45t60911H Brassica oleracea HOM05D001200 ORTHO05D010401 4.0e-11 71.2 52 71.2
Nitab4.5_0001342g0130 Nicotiana tabacum HOM05D001200 ORTHO05D002731 8.9e-11 70.1 135 38.5
C06p42260 Brassica napus HOM05D001200 ORTHO05D010401 1.2e-10 69.7 52 69.2
BraSC25t45908Z Brassica rapa HOM05D001200 ORTHO05D010401 1.2e-10 69.7 52 69.2
Medtr0002s0170 Medicago truncatula HOM05D001200 ORTHO05D002731 1.2e-10 69.7 135 34.8
C09p40370 Brassica napus HOM05D001200 ORTHO05D002731 1.5e-10 69.3 137 38.0
Gohir.A01G143400 Gossypium hirsutum HOM05D001200 ORTHO05D002731 2.0e-10 68.9 135 36.3
RcHm_v2.0_Chr5g0017231 Rosa chinensis HOM05D001200 ORTHO05D002731 2.0e-10 68.9 135 36.3
Ciclev10027631m.g Citrus clementina HOM05D001200 ORTHO05D002731 2.6e-10 68.6 137 36.5
Ciclev10027650m.g Citrus clementina HOM05D001200 ORTHO05D002731 2.6e-10 68.6 137 36.5
Migut.D01255 Erythranthe guttata HOM05D001200 ORTHO05D010401 2.6e-10 68.6 93 45.2
Gohir.1Z049731 Gossypium hirsutum HOM05D001200 ORTHO05D002731 2.6e-10 68.6 135 36.3
Gohir.A02G134201 Gossypium hirsutum HOM05D001200 ORTHO05D010401 2.6e-10 68.6 135 36.3
Oeu053979.1 Olea europaea HOM05D001200 ORTHO05D002731 2.6e-10 68.6 49 69.4
HanXRQChr03g0073091 Helianthus annuus HOM05D001200 ORTHO05D002731 7.5e-10 67.0 135 35.6
RcHm_v2.0_Chr5g0043051 Rosa chinensis HOM05D001200 ORTHO05D002731 1.3e-09 66.2 135 35.6
Sed0012006 Sechium edule HOM05D001200 ORTHO05D002731 1.7e-09 65.9 135 34.1
RcHm_v2.0_CPg0502811 Rosa chinensis HOM05D001200 ORTHO05D010401 4.9e-09 64.3 51 62.7
Medtr4g006120 Medicago truncatula HOM05D001200 ORTHO05D002731 1.1e-08 63.2 134 32.8
Medtr4g050950 Medicago truncatula HOM05D001200 ORTHO05D002731 1.1e-08 63.2 134 32.8
MBI10_g47590_MAGBIO Magnolia biondii HOM05D001200 ORTHO05D002731 1.4e-08 62.8 45 68.9
Ciclev10030459m.g Citrus clementina HOM05D001200 ORTHO05D010401 1.9e-08 62.4 53 62.3
Gorai.006G071400 Gossypium raimondii HOM05D001200 ORTHO05D002731 2.4e-08 62.0 135 35.6
GSVIVG01004976001 Vitis vinifera HOM05D001200 ORTHO05D010401 1.2e-07 59.7 51 62.7
Medtr7g021720 Medicago truncatula HOM05D001200 ORTHO05D002731 1.6e-07 59.3 50 56.0
Gorai.012G007400 Gossypium raimondii HOM05D001200 ORTHO05D010401 3.5e-07 58.2 51 60.8
Oeu012765.1 Olea europaea HOM05D001200 ORTHO05D002731 3.5e-07 58.2 82 47.6
Oeu048498.1 Olea europaea HOM05D001200 ORTHO05D010401 3.5e-07 58.2 46 60.9
Solyc01g065640.3 Solanum lycopersicum HOM05D001200 ORTHO05D010401 4.6e-07 57.8 45 66.7
Phvul.002G050301 Phaseolus vulgaris HOM05D001200 ORTHO05D002731 6.6e-06 53.9 50 54.0


User provided reference genes

Program Settings