Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc01g111820.2 Solanum lycopersicum HOM05D007970 ORTHO05D009943 2.3e-72 275.4 132 100.0
PGSC0003DMG400018628 Solanum tuberosum HOM05D007970 ORTHO05D009943 4.6e-57 224.6 123 86.2
Sopen01g053860 Solanum pennellii HOM05D007970 ORTHO05D009943 1.7e-51 206.1 112 90.2
Nitab4.5_0013642g0020 Nicotiana tabacum HOM05D007970 ORTHO05D009943 4.2e-34 148.3 105 66.7
CAN.G588.103 Capsicum annuum HOM05D007970 ORTHO05D009943 9.3e-34 147.1 101 69.3
Peaxi162Scf00362g00411 Petunia axillaris HOM05D007970 ORTHO05D009943 4.8e-30 134.8 102 63.7
Actinidia18037 Actinidia chinensis HOM05D007970 ORTHO05D009943 3.0e-24 115.5 113 51.3
Peaxi162Scf00078g00137 Petunia axillaris HOM05D007970 ORTHO05D009943 2.6e-23 112.5 98 58.2
Oeu015553.1 Olea europaea HOM05D007970 ORTHO05D009943 7.4e-23 110.9 101 53.5
Dinv41914 Davidia involucrata HOM05D007970 ORTHO05D009943 9.7e-23 110.5 105 59.0
Rhsim11G0193700 Rhododendron simsii HOM05D007970 ORTHO05D009943 1.5e-20 103.2 95 56.8
Actinidia14361 Actinidia chinensis HOM05D007970 ORTHO05D009943 4.5e-20 101.7 113 46.9
Rhsim05G0052900 Rhododendron simsii HOM05D007970 ORTHO05D009943 7.7e-20 100.9 106 50.9
Actinidia21480 Actinidia chinensis HOM05D007970 ORTHO05D009943 1.0e-19 100.5 106 48.1
Oeu028958.1 Olea europaea HOM05D007970 ORTHO05D009943 1.3e-19 100.1 109 45.9
Oeu045100.1 Olea europaea HOM05D007970 ORTHO05D009943 3.8e-19 98.6 85 57.6
CSS0030284 Camellia sinensis var. sinensis HOM05D007970 ORTHO05D009943 1.1e-18 97.1 89 59.6
TWI31G1200 Tripterygium wilfordii HOM05D007970 ORTHO05D009943 1.4e-18 96.7 103 50.5
vmacro17329 Vaccinium macrocarpon HOM05D007970 ORTHO05D009943 2.5e-18 95.9 83 62.7
Nitab4.5_0000079g0240 Nicotiana tabacum HOM05D007970 ORTHO05D009943 4.2e-18 95.1 62 67.7
SalBow1G1176 Salvia bowleyana HOM05D007970 ORTHO05D009943 5.5e-18 94.7 105 46.7
Nitab4.5_0004867g0050 Nicotiana tabacum HOM05D007970 ORTHO05D009943 1.0e-16 90.5 67 59.7
Hma1.2p1_0032F.1_g019140 Hydrangea macrophylla HOM05D007970 ORTHO05D009943 8.8e-16 87.4 109 47.7
TAR376G1232 Trochodendron aralioides HOM05D007970 ORTHO05D009943 1.1e-15 87.0 119 42.0
Lsat_1_v5_gn_4_72040 Lactuca sativa HOM05D007970 ORTHO05D009943 3.3e-15 85.5 95 56.8
COL.COLO4_36729 Corchorus olitorius HOM05D007970 ORTHO05D009943 4.4e-15 85.1 112 41.1
TWI75G1150 Tripterygium wilfordii HOM05D007970 ORTHO05D009943 4.4e-15 85.1 87 49.4
Actinidia20529 Actinidia chinensis HOM05D007970 ORTHO05D009943 9.7e-15 84.0 73 56.2
Thecc.02G055100 Theobroma cacao HOM05D007970 ORTHO05D009943 1.7e-14 83.2 94 46.8
Prupe.8G169400 Prunus persica HOM05D007970 ORTHO05D009943 3.7e-14 82.0 88 47.7
Dinv14128 Davidia involucrata HOM05D007970 ORTHO05D009943 6.3e-14 81.3 81 55.6
Migut.N01333 Erythranthe guttata HOM05D007970 ORTHO05D009943 8.2e-14 80.9 94 48.9
FAN20G1196 Fragaria x ananassa HOM05D007970 ORTHO05D009943 8.2e-14 80.9 114 40.4
Migut.B00057 Erythranthe guttata HOM05D007970 ORTHO05D009943 1.4e-13 80.1 102 43.1
FAN27G0083 Fragaria x ananassa HOM05D007970 ORTHO05D009943 1.8e-13 79.7 59 59.3
Lj9P400T40 Lonicera japonica HOM05D007970 ORTHO05D009943 2.4e-13 79.3 90 52.2
Manes.11G099100 Manihot esculenta HOM05D007970 ORTHO05D009943 2.4e-13 79.3 107 43.0
FvH4_2g15690 Fragaria vesca HOM05D007970 ORTHO05D009943 4.1e-13 78.6 59 59.3
FAN15G0059 Fragaria x ananassa HOM05D007970 ORTHO05D009943 4.1e-13 78.6 59 59.3
FAN24G2575 Fragaria x ananassa HOM05D007970 ORTHO05D009943 4.1e-13 78.6 59 59.3
SGA_v2.0_scaffold32G13308 Striga asiatica HOM05D007970 ORTHO05D009943 4.1e-13 78.6 108 39.8
Duzib248G1052 Durio zibethinus HOM05D007970 ORTHO05D009943 5.3e-13 78.2 94 44.7
Potri.004G178101 Populus trichocarpa HOM05D007970 ORTHO05D009943 7.0e-13 77.8 108 40.7
SGA_v2.0_scaffold195G40813 Striga asiatica HOM05D007970 ORTHO05D009943 9.1e-13 77.4 80 51.2
Cfa005290 Carpinus fangiana HOM05D007970 ORTHO05D009943 1.2e-12 77.0 100 43.0
Nn5g30844 Nelumbo nucifera HOM05D007970 ORTHO05D006261 1.6e-12 76.6 124 35.5
Sabra04G0119900 Salix brachista HOM05D007970 ORTHO05D009943 1.6e-12 76.6 107 40.2
Gorai.012G156800 Gossypium raimondii HOM05D007970 ORTHO05D009943 2.6e-12 75.9 117 41.0
Peaxi162Scf00373g00094 Petunia axillaris HOM05D007970 ORTHO05D009943 2.6e-12 75.9 52 65.4
Gohir.D04G168500 Gossypium hirsutum HOM05D007970 ORTHO05D009943 3.5e-12 75.5 117 41.0
Manes.04G070700 Manihot esculenta HOM05D007970 ORTHO05D009943 4.5e-12 75.1 80 52.5
RcHm_v2.0_Chr6g0278991 Rosa chinensis HOM05D007970 ORTHO05D009943 5.9e-12 74.7 62 56.5
Haze_02097 Corylus avellana HOM05D007970 ORTHO05D009943 7.7e-12 74.3 100 43.0
Ciclev10030163m.g Citrus clementina HOM05D007970 ORTHO05D009943 1.0e-11 73.9 65 56.9
Gohir.A04G131900 Gossypium hirsutum HOM05D007970 ORTHO05D009943 1.7e-11 73.2 114 42.1
Gohir.A03G206000 Gossypium hirsutum HOM05D007970 ORTHO05D009943 6.5e-11 71.2 126 34.9
MD10G1128300 Malus domestica HOM05D007970 ORTHO05D009943 8.5e-11 70.9 101 45.5
Cpa.g.sc20.116 Carica papaya HOM05D007970 ORTHO05D009943 1.9e-10 69.7 54 59.3
Gorai.005G255300 Gossypium raimondii HOM05D007970 ORTHO05D009943 1.9e-10 69.7 126 34.9
ClCG02G012110 Citrullus lanatus HOM05D007970 ORTHO05D009943 7.2e-10 67.8 95 41.1
SGA_v2.0_scaffold58G20343 Striga asiatica HOM05D007970 ORTHO05D009943 7.2e-10 67.8 105 35.2
Gohir.D02G227400 Gossypium hirsutum HOM05D007970 ORTHO05D009943 2.1e-09 66.2 102 38.2
TAR268G0003 Trochodendron aralioides HOM05D006872 ORTHO05D006261 1.8e-08 63.2 58 58.6
Nn2g14262 Nelumbo nucifera HOM05D006872 ORTHO05D006261 2.3e-08 62.8 58 56.9
Nn6g34756 Nelumbo nucifera HOM05D006872 ORTHO05D006261 3.0e-08 62.4 58 55.2
MELO3C034691.2 Cucumis melo HOM05D007970 ORTHO05D009943 4.0e-08 62.0 103 40.8
MBI01_g17601_MAGBIO Magnolia biondii HOM05D006872 ORTHO05D006261 4.0e-08 62.0 92 37.0
DCAR_022819 Daucus carota HOM05D046813 ORTHO05D009943 6.7e-08 61.2 122 35.2
DCAR_022820 Daucus carota HOM05D046813 ORTHO05D009943 6.7e-08 61.2 122 35.2
TAR633G1261 Trochodendron aralioides HOM05D006872 ORTHO05D006261 1.2e-07 60.5 61 54.1
CiPaw.05G085600 Carya illinoinensis HOM05D007970 ORTHO05D009943 7.5e-07 57.8 77 45.5
EL10Ac7g16814 Beta vulgaris HOM05D006872 ORTHO05D006261 9.7e-07 57.4 71 47.9
Gohir.D01G161700 Gossypium hirsutum HOM05D007970 ORTHO05D009943 9.7e-07 57.4 108 36.1
QL11p052437 Quercus lobata HOM05D007970 ORTHO05D009943 9.7e-07 57.4 115 34.8
Aqoxy4G02683 Aquilegia oxysepala HOM05D006872 ORTHO05D006261 1.3e-06 57.0 61 52.5
CANSAT25G3784 Cannabis sativa HOM05D007970 ORTHO05D009943 2.2e-06 56.2 88 42.0
Gorai.002G200600 Gossypium raimondii HOM05D007970 ORTHO05D009943 2.2e-06 56.2 108 36.1
TWI77G0288 Tripterygium wilfordii HOM05D006872 ORTHO05D006261 2.2e-06 56.2 59 54.2
Actinidia07935 Actinidia chinensis HOM05D006872 ORTHO05D006261 2.8e-06 55.8 61 50.8
CiPaw.13G131800 Carya illinoinensis HOM05D006872 ORTHO05D006261 4.8e-06 55.1 64 48.4
Atru.chr5.3444 Acer truncatum HOM05D007970 ORTHO05D009943 8.2e-06 54.3 63 50.8
Nn4g22751 Nelumbo nucifera HOM05D006872 ORTHO05D006261 8.2e-06 54.3 56 50.0


User provided reference genes

Program Settings