Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc01g109895.1 Solanum lycopersicum HOM05D006691 ORTHO05D007620 8.5e-55 216.9 117 100.0
Sopen01g052090 Solanum pennellii HOM05D006691 ORTHO05D007620 4.0e-36 154.8 85 97.6
PGSC0003DMG400030948 Solanum tuberosum HOM05D006691 ORTHO05D007620 1.5e-35 152.9 85 94.1
CAN.G1544.5 Capsicum annuum HOM05D006691 ORTHO05D007620 4.0e-28 128.3 87 85.1
Nitab4.5_0007454g0010 Nicotiana tabacum HOM05D006691 ORTHO05D007620 2.2e-26 122.5 93 74.2
Nitab4.5_0003234g0120 Nicotiana tabacum HOM05D006691 ORTHO05D007620 1.2e-24 116.7 92 71.7
Peaxi162Scf00016g00429 Petunia axillaris HOM05D006691 ORTHO05D007620 1.0e-23 113.6 98 69.4
Nitab4.5_0013456g0010 Nicotiana tabacum HOM05D006691 ORTHO05D007620 1.9e-22 109.4 96 68.8
Nitab4.5_0001413g0050 Nicotiana tabacum HOM05D006691 ORTHO05D007620 6.2e-21 104.4 97 64.9
QL11p045203 Quercus lobata HOM05D006691 ORTHO05D007620 4.9e-18 94.7 93 61.3
Dinv23490 Davidia involucrata HOM05D006691 ORTHO05D007620 5.4e-17 91.3 93 59.1
FAN15G0999 Fragaria x ananassa HOM05D006691 ORTHO05D007620 5.4e-17 91.3 94 56.4
MD10G1069300 Malus domestica HOM05D006691 ORTHO05D007620 5.4e-17 91.3 90 57.8
Dinv42040 Davidia involucrata HOM05D006691 ORTHO05D007620 7.0e-17 90.9 94 59.6
Glyma.13G201100 Glycine max HOM05D006691 ORTHO05D007620 7.0e-17 90.9 95 56.8
Peaxi162Scf00684g00234 Petunia axillaris HOM05D006691 ORTHO05D007620 7.0e-17 90.9 86 65.1
FAN27G2049 Fragaria x ananassa HOM05D006691 ORTHO05D007620 1.2e-16 90.1 94 56.4
Lalb_Chr01g0007961 Lupinus albus HOM05D006691 ORTHO05D007620 1.2e-16 90.1 92 56.5
Phvul.011G210100 Phaseolus vulgaris HOM05D006691 ORTHO05D007620 2.7e-16 89.0 94 57.4
Prupe.8G091200 Prunus persica HOM05D006691 ORTHO05D007620 2.7e-16 89.0 93 54.8
Cc00_g15110 Coffea canephora HOM05D006691 ORTHO05D007620 3.5e-16 88.6 95 57.9
FAN20G2766 Fragaria x ananassa HOM05D006691 ORTHO05D007620 3.5e-16 88.6 94 55.3
Lj1g0004010 Lotus japonicus HOM05D006691 ORTHO05D007620 3.5e-16 88.6 89 60.7
Ciclev10030122m.g Citrus clementina HOM05D006691 ORTHO05D007620 6.0e-16 87.8 89 59.6
Actinidia00546 Actinidia chinensis HOM05D006691 ORTHO05D007620 1.0e-15 87.0 83 57.8
Medtr8g037800 Medicago truncatula HOM05D006691 ORTHO05D007620 1.0e-15 87.0 91 57.1
RcHm_v2.0_Chr6g0265861 Rosa chinensis HOM05D006691 ORTHO05D007620 1.0e-15 87.0 94 57.4
MD05G1061400 Malus domestica HOM05D006691 ORTHO05D007620 1.3e-15 86.7 90 54.4
FvH4_2g09570 Fragaria vesca HOM05D006691 ORTHO05D007620 1.7e-15 86.3 94 54.3
FAN24G2625 Fragaria x ananassa HOM05D006691 ORTHO05D007620 1.7e-15 86.3 94 54.3
TAR628G0615 Trochodendron aralioides HOM05D006691 ORTHO05D007620 2.3e-15 85.9 93 59.1
GSVIVG01023821001 Vitis vinifera HOM05D006691 ORTHO05D007620 3.0e-15 85.5 95 55.8
Potri.009G119900 Populus trichocarpa HOM05D006691 ORTHO05D007620 3.9e-15 85.1 94 57.4
COL.COLO4_25981 Corchorus olitorius HOM05D006691 ORTHO05D007620 5.1e-15 84.7 89 58.4
Migut.B00211 Erythranthe guttata HOM05D006691 ORTHO05D007620 6.6e-15 84.3 90 60.0
CSS0036321 Camellia sinensis var. sinensis HOM05D006691 ORTHO05D007620 8.6e-15 84.0 86 55.8
Gorai.005G245800 Gossypium raimondii HOM05D006691 ORTHO05D007620 8.6e-15 84.0 83 61.4
TPR.G1848 Trifolium pratense HOM05D006691 ORTHO05D007620 8.6e-15 84.0 91 56.0
Gohir.D02G217900 Gossypium hirsutum HOM05D006691 ORTHO05D007620 2.5e-14 82.4 83 60.2
Lj3g0013236 Lotus japonicus HOM05D006691 ORTHO05D007620 2.5e-14 82.4 89 57.3
SalBow6G5689 Salvia bowleyana HOM05D006691 ORTHO05D007620 2.5e-14 82.4 85 56.5
TWI31G1476 Tripterygium wilfordii HOM05D006691 ORTHO05D007620 2.5e-14 82.4 88 52.3
Gohir.A03G196700 Gossypium hirsutum HOM05D006691 ORTHO05D007620 4.3e-14 81.6 83 60.2
Manes.11G091700 Manihot esculenta HOM05D006691 ORTHO05D007620 5.6e-14 81.3 95 52.6
Psat4g192840 Pisum sativum HOM05D006691 ORTHO05D007620 7.3e-14 80.9 87 56.3
Eucgr.I01291 Eucalyptus grandis HOM05D006691 ORTHO05D007620 9.5e-14 80.5 92 55.4
Hma1.2p1_0066F.1_g036140 Hydrangea macrophylla HOM05D006691 ORTHO05D007620 1.2e-13 80.1 88 52.3
Thecc.02G080700 Theobroma cacao HOM05D006691 ORTHO05D007620 1.2e-13 80.1 86 59.3
TWI79G1416 Tripterygium wilfordii HOM05D006691 ORTHO05D007620 2.1e-13 79.3 89 53.9
CiPaw.06G132900 Carya illinoinensis HOM05D006691 ORTHO05D007620 2.8e-13 79.0 93 50.5
Duzib132G0715 Durio zibethinus HOM05D006691 ORTHO05D007620 1.1e-12 77.0 85 57.6
Gohir.D13G030800 Gossypium hirsutum HOM05D006691 ORTHO05D007620 1.1e-12 77.0 84 56.0
Gorai.013G035000 Gossypium raimondii HOM05D006691 ORTHO05D007620 1.1e-12 77.0 84 56.0
arahy.Tifrunner.gnm1.ann1.43WB82 Arachis hypogaea HOM05D006691 ORTHO05D007620 2.3e-12 75.9 85 54.1
CANSAT11G0932 Cannabis sativa HOM05D006691 ORTHO05D007620 6.8e-12 74.3 91 54.9
Duzib248G1522 Durio zibethinus HOM05D006691 ORTHO05D007620 6.8e-12 74.3 85 57.6
CSS0004191 Camellia sinensis var. sinensis HOM05D006691 ORTHO05D007620 1.2e-11 73.6 83 53.0
Gohir.A13G032600 Gossypium hirsutum HOM05D006691 ORTHO05D007620 1.2e-11 73.6 84 54.8
Manes.04G087299 Manihot esculenta HOM05D006691 ORTHO05D007620 2.0e-11 72.8 92 48.9
PSO591G0314 Papaver somniferum HOM05D006691 ORTHO05D007620 2.0e-11 72.8 99 51.5
Thhalv10026702m.g Eutrema salsugineum HOM05D006691 ORTHO05D007620 5.8e-11 71.2 85 48.2
Hund06253 Selenicereus undatus HOM05D006691 ORTHO05D007620 5.8e-11 71.2 94 47.9
THA.LOC104819621 Tarenaya hassleriana HOM05D006691 ORTHO05D007620 5.8e-11 71.2 85 50.6
CsaV3_2G015000 Cucumis sativus L. HOM05D006691 ORTHO05D007620 7.5e-11 70.9 82 50.0
PSO675G5127 Papaver somniferum HOM05D006691 ORTHO05D007620 7.5e-11 70.9 99 47.5
Carub.0007s0568 Capsella rubella HOM05D006691 ORTHO05D007620 9.9e-11 70.5 86 50.0
CARHR242800 Cardamine hirsuta HOM05D006691 ORTHO05D007620 1.3e-10 70.1 85 49.4
Aqoxy5G01556 Aquilegia oxysepala HOM05D006691 ORTHO05D007620 1.7e-10 69.7 94 53.2
AL7G16600 Arabidopsis lyrata HOM05D006691 ORTHO05D007620 1.7e-10 69.7 85 50.6
A03p63030 Brassica napus HOM05D006691 ORTHO05D007620 2.9e-10 68.9 85 49.4
BraA03t15377Z Brassica rapa HOM05D006691 ORTHO05D007620 2.9e-10 68.9 85 49.4
AT2G16385 Arabidopsis thaliana HOM05D006691 ORTHO05D007620 4.9e-10 68.2 84 47.6
ClCG11G004170 Citrullus lanatus HOM05D006691 ORTHO05D007620 4.9e-10 68.2 74 54.1
MELO3C023320.2 Cucumis melo HOM05D006691 ORTHO05D007620 4.9e-10 68.2 83 48.2
C07p60660 Brassica napus HOM05D006691 ORTHO05D007620 6.4e-10 67.8 85 48.2
BolC7t46496H Brassica oleracea HOM05D006691 ORTHO05D007620 6.4e-10 67.8 85 48.2
Rhsim05G0071400 Rhododendron simsii HOM05D006691 ORTHO05D007620 6.4e-10 67.8 91 50.5
A01p03880 Brassica napus HOM05D006691 ORTHO05D007620 1.1e-09 67.0 85 47.1
BcaNung00683 Brassica carinata HOM05D006691 ORTHO05D007620 1.4e-09 66.6 85 47.1
C01p04190 Brassica napus HOM05D006691 ORTHO05D007620 1.4e-09 66.6 85 47.1
MBI16_g36843_MAGBIO Magnolia biondii HOM05D006691 ORTHO05D007620 1.4e-09 66.6 88 46.6
BraA01t00375Z Brassica rapa HOM05D006691 ORTHO05D007620 1.9e-09 66.2 85 47.1
arahy.Tifrunner.gnm1.ann1.D742FH Arachis hypogaea HOM05D006691 ORTHO05D007620 3.2e-09 65.5 38 73.7
CSS0048821 Camellia sinensis var. sinensis HOM05D006691 ORTHO05D007620 3.2e-09 65.5 99 44.4
AL3G52540 Arabidopsis lyrata HOM05D006691 ORTHO05D007620 4.1e-09 65.1 81 45.7
BcaB03g11823 Brassica carinata HOM05D006691 ORTHO05D007620 4.1e-09 65.1 88 47.7
Glyma.12G235600 Glycine max HOM05D006691 ORTHO05D007620 4.1e-09 65.1 38 76.3
PGR042G3893 Punica granatum HOM05D006691 ORTHO05D007620 4.1e-09 65.1 84 51.2
HanXRQChr04g0127791 Helianthus annuus HOM05D006691 ORTHO05D007620 5.4e-09 64.7 89 51.7
BcaNung04921 Brassica carinata HOM05D006691 ORTHO05D007620 9.2e-09 63.9 86 45.3
Sed0023451 Sechium edule HOM05D006691 ORTHO05D007620 2.1e-08 62.8 87 46.0
HanXRQChr16g0505401 Helianthus annuus HOM05D006691 ORTHO05D007620 4.6e-08 61.6 92 44.6
CiPaw.05G069100 Carya illinoinensis HOM05D006691 ORTHO05D007620 6.0e-08 61.2 32 81.2
CiPaw.05G069300 Carya illinoinensis HOM05D006691 ORTHO05D007620 6.0e-08 61.2 32 81.2
CiPaw.05G069400 Carya illinoinensis HOM05D006691 ORTHO05D007620 6.0e-08 61.2 32 81.2
Lsat_1_v5_gn_7_91560 Lactuca sativa HOM05D006691 ORTHO05D007620 6.0e-08 61.2 86 50.0
BolC1t00407H Brassica oleracea HOM05D006691 ORTHO05D007620 1.0e-07 60.5 85 43.5
arahy.Tifrunner.gnm1.ann1.GKZX65 Arachis hypogaea HOM05D006691 ORTHO05D007620 1.3e-07 60.1 104 42.3
arahy.Tifrunner.gnm1.ann1.JP7MPK Arachis hypogaea HOM05D006691 ORTHO05D007620 1.7e-07 59.7 104 42.3
BcaC01g00889 Brassica carinata HOM05D006691 ORTHO05D007620 1.7e-07 59.7 88 46.6
MBI10_g00752_MAGBIO Magnolia biondii HOM05D006691 ORTHO05D007620 2.3e-07 59.3 31 83.9
Sc18g0005100 Simmondsia chinensis HOM05D006691 ORTHO05D007620 2.3e-07 59.3 91 41.8
Carub.0003s3015 Capsella rubella HOM05D006691 ORTHO05D007620 3.0e-07 58.9 85 44.7
BraA08t33636Z Brassica rapa HOM05D006691 ORTHO05D007620 5.1e-07 58.2 86 45.3
BolC3t20851H Brassica oleracea HOM05D006691 ORTHO05D007620 6.6e-07 57.8 85 41.2
ATR0585G050 Amborella trichopoda HOM05D006691 ORTHO05D007620 1.1e-06 57.0 94 42.6
HPP92_010634 Vanilla planifolia HOM05D006691 ORTHO05D007620 1.1e-06 57.0 85 45.9
DCAR_001560 Daucus carota HOM05D006691 ORTHO05D007620 2.5e-06 55.8 87 39.1
Sp7g32390 Schrenkiella parvula HOM05D006691 ORTHO05D007620 4.3e-06 55.1 66 47.0
Lalb_Chr03g0032901 Lupinus albus HOM05D006691 ORTHO05D007620 5.6e-06 54.7 37 62.2
HPP92_017191 Vanilla planifolia HOM05D006691 ORTHO05D007620 9.5e-06 53.9 88 45.5


User provided reference genes

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