Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc01g109820.1 Solanum lycopersicum HOM05D011230 ORTHO05D013017 2.0e-169 599.0 290 100.0
PGSC0003DMG400036841 Solanum tuberosum HOM05D011230 ORTHO05D013017 3.6e-155 551.6 291 91.8
Peaxi162Scf00016g00525 Petunia axillaris HOM05D011230 ORTHO05D013017 1.2e-57 227.6 295 44.7
Peaxi162Scf00021g00046 Petunia axillaris HOM05D011230 ORTHO05D013017 8.6e-56 221.5 297 43.4
Peaxi162Scf00016g00054 Petunia axillaris HOM05D009034 ORTHO05D009362 1.5e-55 220.7 259 47.1
Peaxi162Scf00550g00053 Petunia axillaris HOM05D011230 ORTHO05D013017 3.0e-53 213.0 283 47.0
Nitab4.5_0002169g0030 Nicotiana tabacum HOM05D011230 ORTHO05D013017 2.6e-44 183.3 248 42.7
Nitab4.5_0000308g0380 Nicotiana tabacum HOM05D011230 ORTHO05D013017 3.3e-31 139.8 202 41.6
Peaxi162Scf00835g00120 Petunia axillaris HOM05D011230 ORTHO05D013017 6.2e-30 135.6 194 43.3
Nitab4.5_0006490g0010 Nicotiana tabacum HOM05D011230 ORTHO05D013017 1.4e-26 124.4 189 41.3
Nitab4.5_0007632g0010 Nicotiana tabacum HOM05D011230 ORTHO05D013017 1.7e-16 90.9 152 36.8
Peaxi162Scf00026g00228 Petunia axillaris HOM05D011230 ORTHO05D013017 5.1e-16 89.4 97 48.5
Nitab4.5_0003056g0010 Nicotiana tabacum HOM05D011230 ORTHO05D013017 1.3e-14 84.7 129 38.8
Peaxi162Scf00835g00028 Petunia axillaris HOM05D011230 ORTHO05D013017 6.2e-14 82.4 125 40.0
Nitab4.5_0000137g0380 Nicotiana tabacum HOM05D011230 ORTHO05D013017 1.8e-13 80.9 147 39.5
Oeu003256.1 Olea europaea HOM05D000082 ORTHO05D000038 3.9e-08 63.2 147 29.9
Peaxi162Scf00021g00047 Petunia axillaris HOM05D011230 ORTHO05D013017 1.5e-07 61.2 69 46.4
ATR0705G151 Amborella trichopoda HOM05D000082 ORTHO05D000038 1.3e-06 58.2 84 34.5
CSS0032511 Camellia sinensis var. sinensis HOM05D014769 ORTHO05D015780 1.6e-06 57.8 47 48.9
unitig_748.g8171 Utricularia gibba HOM05D000187 ORTHO05D000230 1.6e-06 57.8 47 42.6
CSS0008729 Camellia sinensis var. sinensis HOM05D014769 ORTHO05D015780 2.8e-06 57.0 47 48.9
RcHm_v2.0_Chr1g0327571 Rosa chinensis HOM05D000187 ORTHO05D000230 2.8e-06 57.0 46 47.8
Potri.017G102800 Populus trichocarpa HOM05D000082 ORTHO05D000038 4.8e-06 56.2 135 29.6
AL6G47080 Arabidopsis lyrata HOM05D008302 ORTHO05D000038 6.2e-06 55.8 71 35.2
HanXRQChr05g0146871 Helianthus annuus HOM05D000341 ORTHO05D000557 6.2e-06 55.8 59 49.2
unitig_32.g10943 Utricularia gibba HOM05D000187 ORTHO05D000230 6.2e-06 55.8 47 42.6
ATR0705G114 Amborella trichopoda HOM05D000082 ORTHO05D000038 8.1e-06 55.5 70 37.1
CiPaw.16G005300 Carya illinoinensis HOM05D010992 ORTHO05D000038 8.1e-06 55.5 83 34.9
Ciclev10023541m.g Citrus clementina HOM05D000082 ORTHO05D000038 8.1e-06 55.5 70 37.1
Gohir.A13G235250 Gossypium hirsutum HOM05D000440 ORTHO05D000295 8.1e-06 55.5 93 36.6
HanXRQChr02g0043411 Helianthus annuus HOM05D023761 ORTHO05D025312 8.1e-06 55.5 50 48.0
HanXRQChr02g0045551 Helianthus annuus HOM05D023761 ORTHO05D025312 8.1e-06 55.5 50 48.0
HanXRQChr02g0045571 Helianthus annuus HOM05D023761 ORTHO05D025312 8.1e-06 55.5 50 48.0


User provided reference genes

Program Settings