Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc01g109600.4 Solanum lycopersicum HOM05D007015 ORTHO05D007679 2.3e-84 315.5 156 100.0
Sopen01g051790 Solanum pennellii HOM05D007015 ORTHO05D007679 1.5e-83 312.8 156 98.7
PGSC0003DMG400000706 Solanum tuberosum HOM05D007015 ORTHO05D007679 1.4e-81 306.2 156 96.8
CAN.G1412.4 Capsicum annuum HOM05D007015 ORTHO05D007679 3.3e-78 295.0 156 92.9
Nitab4.5_0000308g0060 Nicotiana tabacum HOM05D007015 ORTHO05D007679 1.1e-73 280.0 154 88.3
Nitab4.5_0004172g0110 Nicotiana tabacum HOM05D007015 ORTHO05D007679 4.1e-73 278.1 152 88.2
Peaxi162Scf00016g00829 Petunia axillaris HOM05D007015 ORTHO05D007679 7.3e-70 267.3 154 83.8
Duzib132G0398 Durio zibethinus HOM05D007015 ORTHO05D007679 8.1e-69 263.8 151 82.8
Dinv23523 Davidia involucrata HOM05D007015 ORTHO05D007679 1.4e-68 263.1 154 80.5
Lsat_1_v5_gn_9_109600 Lactuca sativa HOM05D007015 ORTHO05D007679 6.9e-68 260.8 149 82.6
Cc02_g17590 Coffea canephora HOM05D007015 ORTHO05D007679 9.9e-67 256.9 149 81.9
Duzib052G0472 Durio zibethinus HOM05D007015 ORTHO05D007679 2.2e-66 255.8 151 80.8
CiPaw.05G064200 Carya illinoinensis HOM05D007015 ORTHO05D007679 2.9e-66 255.4 151 82.1
Ciclev10028323m.g Citrus clementina HOM05D007015 ORTHO05D007679 2.9e-66 255.4 149 79.2
Thecc.02G085800 Theobroma cacao HOM05D007015 ORTHO05D007679 2.9e-66 255.4 151 80.1
Migut.B00238 Erythranthe guttata HOM05D007015 ORTHO05D007679 8.4e-66 253.8 154 78.6
HanXRQChr03g0061181 Helianthus annuus HOM05D007015 ORTHO05D007679 8.4e-66 253.8 149 79.2
Gohir.A13G034500 Gossypium hirsutum HOM05D007015 ORTHO05D007679 1.1e-65 253.4 151 80.1
Gohir.D13G032901 Gossypium hirsutum HOM05D007015 ORTHO05D007679 1.4e-65 253.1 151 80.1
ECA240G3875 Erigeron canadensis HOM05D007015 ORTHO05D007679 2.4e-65 252.3 148 81.1
CSS0034426 Camellia sinensis var. sinensis HOM05D007015 ORTHO05D007679 3.2e-65 251.9 151 78.8
CSS0043793 Camellia sinensis var. sinensis HOM05D007015 ORTHO05D007679 3.2e-65 251.9 151 78.8
Haze_02382 Corylus avellana HOM05D007015 ORTHO05D007679 4.2e-65 251.5 151 80.1
arahy.Tifrunner.gnm1.ann1.VXY3NA Arachis hypogaea HOM05D007015 ORTHO05D007679 5.4e-65 251.1 154 76.6
Glyma.11G118100 Glycine max HOM05D007015 ORTHO05D007679 5.4e-65 251.1 154 76.0
Nn5g29599 Nelumbo nucifera HOM05D007015 ORTHO05D007679 5.4e-65 251.1 151 79.5
PGR142G1975 Punica granatum HOM05D007015 ORTHO05D007679 7.1e-65 250.8 154 77.3
TAR625G0084 Trochodendron aralioides HOM05D007015 ORTHO05D007679 7.1e-65 250.8 151 79.5
TAR625G0285 Trochodendron aralioides HOM05D007015 ORTHO05D007679 7.1e-65 250.8 151 79.5
arahy.Tifrunner.gnm1.ann1.9AGX7Y Arachis hypogaea HOM05D007015 ORTHO05D007679 1.2e-64 250.0 154 76.0
Manes.15G163500 Manihot esculenta HOM05D007015 ORTHO05D007679 1.6e-64 249.6 151 78.1
VMungo1127G1579 Vigna mungo HOM05D007015 ORTHO05D007679 7.8e-64 247.3 154 74.0
TAR381G1286 Trochodendron aralioides HOM05D007015 ORTHO05D007679 1.0e-63 246.9 147 78.9
Atru.chr5.3012 Acer truncatum HOM05D007015 ORTHO05D007679 1.7e-63 246.1 154 73.4
Cfa005006 Carpinus fangiana HOM05D007015 ORTHO05D007679 1.7e-63 246.1 152 78.9
Phvul.011G045500 Phaseolus vulgaris HOM05D007015 ORTHO05D007679 1.7e-63 246.1 154 75.3
Gorai.008G028700 Gossypium raimondii HOM05D007015 ORTHO05D007679 3.0e-63 245.4 151 76.8
Oeu020759.1 Olea europaea HOM05D007015 ORTHO05D007679 5.1e-63 244.6 154 75.3
SGA_v2.0_scaffold32G13158 Striga asiatica HOM05D007015 ORTHO05D007679 8.7e-63 243.8 149 75.8
Gorai.013G037300 Gossypium raimondii HOM05D007015 ORTHO05D007679 1.1e-62 243.4 165 73.3
Potri.004G154600 Populus trichocarpa HOM05D007015 ORTHO05D007679 1.1e-62 243.4 152 77.0
Lj3g0008828 Lotus japonicus HOM05D007015 ORTHO05D007679 1.5e-62 243.0 154 74.7
MSTRG.20084 Avicennia marina HOM05D007015 ORTHO05D007679 5.6e-62 241.1 154 74.0
Sabra04G0102600 Salix brachista HOM05D007015 ORTHO05D007679 7.3e-62 240.7 152 76.3
QL11p043649 Quercus lobata HOM05D007015 ORTHO05D007679 9.6e-62 240.4 147 76.9
MSTRG.5397 Avicennia marina HOM05D007015 ORTHO05D007679 1.3e-61 240.0 155 70.3
Gohir.D12G028100 Gossypium hirsutum HOM05D007015 ORTHO05D007679 2.1e-61 239.2 146 76.7
THA.LOC104807318 Tarenaya hassleriana HOM05D007015 ORTHO05D007679 2.1e-61 239.2 149 74.5
Prupe.8G097400 Prunus persica HOM05D007015 ORTHO05D007679 3.1e-60 235.3 152 75.0
PSO700G0017 Papaver somniferum HOM05D007015 ORTHO05D007679 4.0e-60 235.0 154 74.0
TWI79G1149 Tripterygium wilfordii HOM05D007015 ORTHO05D007679 5.3e-60 234.6 148 73.0
Lalb_Chr01g0002571 Lupinus albus HOM05D007015 ORTHO05D007679 6.9e-60 234.2 147 73.5
Glyma.12G043500 Glycine max HOM05D007015 ORTHO05D007679 1.2e-59 233.4 147 75.5
Aqoxy5G01645 Aquilegia oxysepala HOM05D007015 ORTHO05D007679 2.0e-59 232.6 152 73.0
Ca_20873_v3 Cicer arietinum L. HOM05D007015 ORTHO05D007679 2.0e-59 232.6 153 74.5
FAN20G1161 Fragaria x ananassa HOM05D007015 ORTHO05D007679 2.0e-59 232.6 151 72.2
MSTRG.27699 Avicennia marina HOM05D007015 ORTHO05D007679 4.5e-59 231.5 154 70.8
EL10Ac9g21726 Beta vulgaris HOM05D007015 ORTHO05D007679 4.5e-59 231.5 161 70.8
Nn1g04999 Nelumbo nucifera HOM05D007015 ORTHO05D007679 4.5e-59 231.5 149 72.5
vmacro02110 Vaccinium macrocarpon HOM05D007015 ORTHO05D007679 7.6e-59 230.7 151 72.8
Hund00268 Selenicereus undatus HOM05D007015 ORTHO05D007679 9.9e-59 230.3 158 70.9
Psat7g184640 Pisum sativum HOM05D007015 ORTHO05D007679 1.3e-58 229.9 147 74.8
MD05G1066700 Malus domestica HOM05D007015 ORTHO05D007679 1.7e-58 229.6 152 73.0
FAN15G1974 Fragaria x ananassa HOM05D007015 ORTHO05D007679 2.2e-58 229.2 147 72.8
GSVIVG01031963001 Vitis vinifera HOM05D007015 ORTHO05D007679 2.9e-58 228.8 154 71.4
MD10G1076600 Malus domestica HOM05D007015 ORTHO05D007679 3.8e-58 228.4 152 73.7
CDE04G3710 Ceratophyllum demersum HOM05D007015 ORTHO05D007679 6.4e-58 227.6 151 72.2
Rhsim11G0176800 Rhododendron simsii HOM05D007015 ORTHO05D007679 1.1e-57 226.9 149 71.1
RcHm_v2.0_Chr6g0264211 Rosa chinensis HOM05D007015 ORTHO05D007679 1.1e-57 226.9 151 69.5
AUR62011326 Chenopodium quinoa HOM05D007015 ORTHO05D007679 1.4e-57 226.5 156 71.2
SalBow3G2347 Salvia bowleyana HOM05D007015 ORTHO05D007679 1.4e-57 226.5 155 69.7
FvH4_2g08750 Fragaria vesca HOM05D007015 ORTHO05D007679 1.9e-57 226.1 151 70.2
Hund06231 Selenicereus undatus HOM05D007015 ORTHO05D007679 2.4e-57 225.7 156 69.9
FAN24G0062 Fragaria x ananassa HOM05D007015 ORTHO05D007679 3.2e-57 225.3 151 70.2
Sc14g0002090 Simmondsia chinensis HOM05D007015 ORTHO05D007679 7.1e-57 224.2 159 69.8
Ah.01g019410 Amaranthus hybridus HOM05D007015 ORTHO05D007679 9.3e-57 223.8 156 68.6
AUR62016734 Chenopodium quinoa HOM05D007015 ORTHO05D007679 1.2e-56 223.4 156 70.5
SEGI_27995 Sequoiadendron giganteum HOM05D007015 ORTHO05D007679 2.7e-56 222.2 151 69.5
ClCG02G005030 Citrullus lanatus HOM05D007015 ORTHO05D007679 3.5e-56 221.9 154 70.8
Medtr4g070010 Medicago truncatula HOM05D007015 ORTHO05D007679 7.9e-56 220.7 147 70.1
MELO3C012524.2 Cucumis melo HOM05D007015 ORTHO05D007679 1.9e-54 216.1 151 71.5
Lj9C372G4 Lonicera japonica HOM05D007015 ORTHO05D007679 3.3e-54 215.3 189 58.2
Sed0022084 Sechium edule HOM05D007015 ORTHO05D007679 3.3e-54 215.3 154 70.1
unitig_744.g24247 Utricularia gibba HOM05D002700 ORTHO05D003228 3.3e-54 215.3 152 69.1
CsaV3_7G023540 Cucumis sativus L. HOM05D007015 ORTHO05D007679 7.4e-54 214.2 151 70.9
MBI16_g42991_MAGBIO Magnolia biondii HOM05D007015 ORTHO05D007679 6.2e-53 211.1 155 66.5
DCAR_028986 Daucus carota HOM05D007015 ORTHO05D007679 8.1e-53 210.7 153 63.4
Lj9C370G1 Lonicera japonica HOM05D007015 ORTHO05D007679 3.1e-52 208.8 189 57.7
Sed0027719 Sechium edule HOM05D007015 ORTHO05D007679 1.2e-51 206.8 154 66.9
HPP92_013431 Vanilla planifolia HOM05D007015 ORTHO05D007679 2.0e-51 206.1 155 61.9
HPP92_027117 Vanilla planifolia HOM05D007015 ORTHO05D007679 2.0e-51 206.1 155 61.9
Eucgr.I01267 Eucalyptus grandis HOM05D007015 ORTHO05D007679 2.6e-51 205.7 154 63.0
Pp3c1_20790 Physcomitrium patens HOM05D007015 ORTHO05D007679 6.4e-50 201.1 154 62.3
unitig_0.g67 Utricularia gibba HOM05D005713 ORTHO05D007751 6.4e-50 201.1 139 73.4
Pp3c14_3730 Physcomitrium patens HOM05D007015 ORTHO05D007679 1.0e-47 193.7 152 59.9
Zm00001eb215850 Zea mays HOM05D007015 ORTHO05D007679 5.6e-46 188.0 153 60.1
Os03g0723600 Oryza sativa ssp. japonica HOM05D007015 ORTHO05D007679 2.8e-45 185.7 153 59.5
SMO367G0892 Selaginella moellendorffii HOM05D007015 ORTHO05D007679 1.0e-42 177.2 147 59.2
AagrBONN_evm.TU.Sc2ySwM_117.322 Anthoceros agrestis HOM05D007015 ORTHO05D007679 1.3e-42 176.8 154 57.8
TPR.G19407 Trifolium pratense HOM05D007015 ORTHO05D007679 3.8e-42 175.3 113 73.5
CBR_g34278 Chara braunii HOM05D007015 ORTHO05D007679 2.8e-37 159.1 152 52.6
ATR0733G065 Amborella trichopoda HOM05D007015 ORTHO05D007679 3.6e-32 142.1 106 65.1
COL.COLO4_25926 Corchorus olitorius HOM05D007015 ORTHO05D007679 1.6e-24 116.7 65 87.7
CiPaw.06G135500 Carya illinoinensis HOM05D007015 ORTHO05D007679 6.7e-23 111.3 66 83.3
Gohir.A12G028600 Gossypium hirsutum HOM05D007015 ORTHO05D007679 7.4e-22 107.8 65 76.9
CDE02G1906 Ceratophyllum demersum HOM05D007015 ORTHO05D007679 4.8e-21 105.1 69 73.9
TPR.G20759 Trifolium pratense HOM05D007015 ORTHO05D007679 1.8e-20 103.2 65 76.9
ATR0733G072 Amborella trichopoda HOM05D007015 ORTHO05D007679 1.1e-17 94.0 66 68.2
Pp3c3_4210 Physcomitrium patens HOM05D001089 ORTHO05D000920 1.5e-06 57.0 155 27.1
HanXRQChr04g0103251 Helianthus annuus HOM05D001089 ORTHO05D000920 2.6e-06 56.2 148 29.7
ECA248G3704 Erigeron canadensis HOM05D001089 ORTHO05D000920 3.3e-06 55.8 147 29.3
SEGI_20246 Sequoiadendron giganteum HOM05D001089 ORTHO05D000920 5.7e-06 55.1 146 28.1
unitig_37.g12243 Utricularia gibba HOM05D001089 ORTHO05D000920 5.7e-06 55.1 114 33.3
Gohir.A03G020100 Gossypium hirsutum HOM05D001089 ORTHO05D000920 9.7e-06 54.3 151 26.5
Gorai.003G156100 Gossypium raimondii HOM05D001089 ORTHO05D000920 9.7e-06 54.3 151 26.5


User provided reference genes

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