Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc01g109030.4 Solanum lycopersicum HOM05D008110 ORTHO05D000088 4.2e-105 384.8 209 100.0
PGSC0003DMG401025831 Solanum tuberosum HOM05D008110 ORTHO05D000088 9.1e-84 313.9 215 82.8
PGSC0003DMG402025831 Solanum tuberosum HOM05D004388 ORTHO05D005106 2.5e-57 226.1 123 87.0
CAN.G322.83 Capsicum annuum HOM05D008110 ORTHO05D000088 2.2e-53 213.0 134 73.9
PGSC0003DMG400025830 Solanum tuberosum HOM05D008110 ORTHO05D000088 5.6e-49 198.4 137 66.4
Solyc01g106250.4 Solanum lycopersicum HOM05D008110 ORTHO05D000088 2.0e-46 189.9 134 67.9
Sopen02g009350 Solanum pennellii HOM05D008110 ORTHO05D000088 2.6e-46 189.5 137 64.2
PGSC0003DMG400010668 Solanum tuberosum HOM05D008110 ORTHO05D000088 5.8e-46 188.3 115 74.8
Solyc02g026080.2 Solanum lycopersicum HOM05D008110 ORTHO05D000088 7.6e-46 188.0 137 63.5
Sopen01g048640 Solanum pennellii HOM05D008110 ORTHO05D000088 7.6e-46 188.0 115 74.8
Sopen01g051160 Solanum pennellii HOM05D008110 ORTHO05D000088 7.6e-46 188.0 130 66.2
CAN.G241.1 Capsicum annuum HOM05D008110 ORTHO05D000088 1.7e-45 186.8 137 62.0
Solyc01g108950.3 Solanum lycopersicum HOM05D008110 ORTHO05D000088 3.8e-45 185.7 130 64.6
Sopen02g006830 Solanum pennellii HOM05D008110 ORTHO05D000088 3.8e-45 185.7 122 68.9
Nitab4.5_0001401g0140 Nicotiana tabacum HOM05D008110 ORTHO05D000088 8.4e-45 184.5 131 64.9
Nitab4.5_0008194g0010 Nicotiana tabacum HOM05D008110 ORTHO05D000088 1.1e-44 184.1 120 68.3
Solyc01g108940.2 Solanum lycopersicum HOM05D008110 ORTHO05D000088 4.2e-44 182.2 119 71.4
CAN.G555.3 Capsicum annuum HOM05D008110 ORTHO05D000088 4.6e-43 178.7 122 65.6
Peaxi162Scf00016g01351 Petunia axillaris HOM05D008110 ORTHO05D000088 4.6e-43 178.7 121 67.8
CAN.G192.15 Capsicum annuum HOM05D008110 ORTHO05D000088 2.3e-42 176.4 131 64.1
CAN.G322.59 Capsicum annuum HOM05D008110 ORTHO05D000088 1.8e-39 166.8 137 59.1
Sopen01g051140 Solanum pennellii HOM05D008110 ORTHO05D000088 1.8e-31 140.2 102 67.6
Cc00_g00220 Coffea canephora HOM05D008110 ORTHO05D000088 9.9e-30 134.4 97 55.7
Cc00_g00230 Coffea canephora HOM05D008110 ORTHO05D000088 2.4e-28 129.8 123 49.6
Actinidia12967 Actinidia chinensis HOM05D008110 ORTHO05D000088 1.3e-26 124.0 104 49.0
PGSC0003DMG400035405 Solanum tuberosum HOM05D008110 ORTHO05D000088 3.9e-26 122.5 100 61.0
CSS0024769 Camellia sinensis var. sinensis HOM05D008110 ORTHO05D000088 5.1e-26 122.1 134 41.0
PGSC0003DMG400044725 Solanum tuberosum HOM05D008110 ORTHO05D000088 5.1e-26 122.1 105 60.0
PGSC0003DMG400044605 Solanum tuberosum HOM05D008110 ORTHO05D000088 8.7e-26 121.3 102 59.8
RhsimUnG0089900 Rhododendron simsii HOM05D008110 ORTHO05D000088 4.3e-25 119.0 122 42.6
Migut.N02603 Erythranthe guttata HOM05D008110 ORTHO05D000088 7.4e-25 118.2 108 48.1
Dinv42109 Davidia involucrata HOM05D008110 ORTHO05D000088 1.6e-24 117.1 94 46.8
Hma1.2p1_1527F.1_g289060 Hydrangea macrophylla HOM05D008110 ORTHO05D000088 8.1e-24 114.8 133 40.6
Rhsim11G0170700 Rhododendron simsii HOM05D008110 ORTHO05D000088 3.1e-23 112.8 111 45.9
MSTRG.17812 Avicennia marina HOM05D008110 ORTHO05D000088 4.0e-23 112.5 101 48.5
Sopen01g051230 Solanum pennellii HOM05D008110 ORTHO05D000088 4.0e-23 112.5 54 98.1
DCAR_022075 Daucus carota HOM05D008110 ORTHO05D000088 6.9e-23 111.7 107 45.8
PGSC0003DMG400036386 Solanum tuberosum HOM05D008110 ORTHO05D000088 9.0e-23 111.3 134 44.8
CAN.G504.44 Capsicum annuum HOM05D000185 ORTHO05D000105 2.6e-22 109.8 77 68.8
CAN.G192.14 Capsicum annuum HOM05D008110 ORTHO05D000088 1.3e-21 107.5 81 65.4
Oeu003285.1 Olea europaea HOM05D008110 ORTHO05D000088 1.3e-21 107.5 97 48.5
Migut.J01193 Erythranthe guttata HOM05D008110 ORTHO05D000088 2.9e-21 106.3 103 47.6
Sopen06g015150 Solanum pennellii HOM05D008110 ORTHO05D000088 2.9e-21 106.3 128 46.1
SalBow7G1050 Salvia bowleyana HOM05D008110 ORTHO05D000088 8.4e-21 104.8 97 47.4
PGSC0003DMG400037529 Solanum tuberosum HOM05D008110 ORTHO05D000088 1.1e-20 104.4 72 62.5
PGSC0003DMG400045703 Solanum tuberosum HOM05D008110 ORTHO05D000088 4.6e-19 99.0 60 73.3
SGA_v2.0_scaffold54G19507 Striga asiatica HOM05D008110 ORTHO05D000088 1.0e-18 97.8 97 49.5
GSVIVG01031853001 Vitis vinifera HOM05D008110 ORTHO05D005106 2.5e-17 93.2 90 43.3
SGA_v2.0_scaffold223G42874 Striga asiatica HOM05D008110 ORTHO05D000088 3.3e-17 92.8 103 40.8
Sopen01g051220 Solanum pennellii HOM05D008110 ORTHO05D000088 4.8e-16 89.0 58 65.5
SGA_v2.0_scaffold54G19506 Striga asiatica HOM05D008110 ORTHO05D000088 1.8e-15 87.0 117 34.2
Rhsim02G0167400 Rhododendron simsii HOM05D008110 ORTHO05D000088 6.9e-15 85.1 83 38.6
Sopen01g051190 Solanum pennellii HOM05D008110 ORTHO05D000088 1.4e-12 77.4 60 61.7
Duzib248G0315 Durio zibethinus HOM05D008110 ORTHO05D000088 2.5e-12 76.6 96 45.8
Eucgr.I01213 Eucalyptus grandis HOM05D008110 ORTHO05D000088 4.2e-12 75.9 81 42.0
Eucgr.A01956 Eucalyptus grandis HOM05D008110 ORTHO05D000088 1.2e-11 74.3 81 40.7
Sopen05g025010 Solanum pennellii HOM05D008110 ORTHO05D000088 2.7e-11 73.2 95 47.4
SalBow3G0306 Salvia bowleyana HOM05D008110 ORTHO05D000088 1.3e-10 70.9 70 40.0
Thecc.02G027900 Theobroma cacao HOM05D008110 ORTHO05D000088 5.1e-10 68.9 99 41.4
Oeu003288.1 Olea europaea HOM05D008110 ORTHO05D000088 1.1e-09 67.8 47 53.2
Glyma.11G124000 Glycine max HOM05D010195 ORTHO05D000088 5.7e-09 65.5 123 31.7
Oeu025427.1 Olea europaea HOM05D044301 ORTHO05D000088 3.7e-08 62.8 76 42.1
Hund06201 Selenicereus undatus HOM05D000823 ORTHO05D000088 4.8e-08 62.4 70 40.0
TWI38G2045 Tripterygium wilfordii HOM05D000823 ORTHO05D000088 1.2e-06 57.8 122 29.5
AUR62016657 Chenopodium quinoa HOM05D000823 ORTHO05D000088 3.4e-06 56.2 81 32.1
Phvul.008G220000 Phaseolus vulgaris HOM05D010195 ORTHO05D000088 3.4e-06 56.2 107 28.0
Dinv26765 Davidia involucrata HOM05D008110 ORTHO05D024989 4.5e-06 55.8 104 26.0
Ah.01g019890 Amaranthus hybridus HOM05D001349 ORTHO05D001980 5.9e-06 55.5 82 32.9
Glyma.12G048500 Glycine max HOM05D010195 ORTHO05D000088 5.9e-06 55.5 136 25.0


User provided reference genes

Program Settings