Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc01g108200.3 Solanum lycopersicum HOM05D007022 ORTHO05D008868 4.1e-89 331.6 204 100.0
Sopen01g050430 Solanum pennellii HOM05D007022 ORTHO05D008868 4.7e-85 318.2 204 97.1
PGSC0003DMG401025892 Solanum tuberosum HOM05D007022 ORTHO05D008868 4.0e-68 261.9 185 94.1
vmacro02203 Vaccinium macrocarpon HOM05D007022 ORTHO05D008868 1.2e-56 223.8 145 74.5
TAR381G0954 Trochodendron aralioides HOM05D007022 ORTHO05D008868 7.9e-56 221.1 141 73.8
Cc02_g18740 Coffea canephora HOM05D007022 ORTHO05D008868 8.7e-55 217.6 143 71.3
Hma1.2p1_0370F.1_g137830 Hydrangea macrophylla HOM05D007022 ORTHO05D008868 8.7e-55 217.6 143 74.8
Nitab4.5_0002543g0040 Nicotiana tabacum HOM05D007022 ORTHO05D008868 8.7e-55 217.6 148 73.0
Rhsim11G0166300 Rhododendron simsii HOM05D007022 ORTHO05D008868 1.1e-54 217.2 206 57.3
QL11p035981 Quercus lobata HOM05D007022 ORTHO05D008868 4.3e-54 215.3 137 71.5
Actinidia12953 Actinidia chinensis HOM05D007022 ORTHO05D008868 5.6e-54 214.9 136 74.3
Dinv23619 Davidia involucrata HOM05D007022 ORTHO05D008868 5.6e-54 214.9 143 73.4
Nn1g04883 Nelumbo nucifera HOM05D007022 ORTHO05D008868 7.4e-54 214.5 142 71.1
GSVIVG01031751001 Vitis vinifera HOM05D007022 ORTHO05D008868 9.6e-54 214.2 143 69.9
Peaxi162Scf00016g01823 Petunia axillaris HOM05D007022 ORTHO05D008868 1.3e-53 213.8 146 75.3
Oeu007283.1 Olea europaea HOM05D007022 ORTHO05D008868 4.8e-53 211.8 145 72.4
Manes.07G082700 Manihot esculenta HOM05D007022 ORTHO05D008868 6.2e-53 211.5 130 73.8
CDE04G2473 Ceratophyllum demersum HOM05D007022 ORTHO05D008868 8.1e-53 211.1 126 78.6
Nitab4.5_0007480g0010 Nicotiana tabacum HOM05D007022 ORTHO05D008868 2.4e-52 209.5 146 71.9
Dinv42154 Davidia involucrata HOM05D007022 ORTHO05D008868 3.1e-52 209.1 132 75.0
MBI06_g36648_MAGBIO Magnolia biondii HOM05D007022 ORTHO05D008868 5.3e-52 208.4 146 68.5
Migut.B00344 Erythranthe guttata HOM05D007022 ORTHO05D008868 6.9e-52 208.0 141 69.5
Cpa.g.sc62.15 Carica papaya HOM05D007022 ORTHO05D008868 2.0e-51 206.5 133 69.9
SalBow6G3975 Salvia bowleyana HOM05D007022 ORTHO05D008868 3.4e-51 205.7 152 65.1
unitig_26.g10239 Utricularia gibba HOM05D007022 ORTHO05D008868 3.4e-51 205.7 114 81.6
Ciclev10029362m.g Citrus clementina HOM05D007022 ORTHO05D008868 1.3e-50 203.8 119 77.3
Nn5g30258 Nelumbo nucifera HOM05D007022 ORTHO05D008868 1.7e-50 203.4 143 67.8
SGA_v2.0_scaffold13G06591 Striga asiatica HOM05D007022 ORTHO05D008868 2.2e-50 203.0 147 70.1
Potri.009G102400 Populus trichocarpa HOM05D007022 ORTHO05D008868 3.8e-50 202.2 128 69.5
MSTRG.27723 Avicennia marina HOM05D007022 ORTHO05D008868 6.5e-50 201.4 136 70.6
PGR042G2146 Punica granatum HOM05D007022 ORTHO05D008868 6.5e-50 201.4 130 70.8
AL3G32600 Arabidopsis lyrata HOM05D007022 ORTHO05D008868 8.4e-50 201.1 131 70.2
AT3G19220 Arabidopsis thaliana HOM05D007022 ORTHO05D008868 8.4e-50 201.1 131 70.2
Thecc.02G100400 Theobroma cacao HOM05D007022 ORTHO05D008868 8.4e-50 201.1 146 66.4
Aqoxy6G01341 Aquilegia oxysepala HOM05D007022 ORTHO05D008868 7.1e-49 198.0 138 68.1
Sp3g17290 Schrenkiella parvula HOM05D007022 ORTHO05D008868 1.2e-48 197.2 135 69.6
Thhalv10021599m.g Eutrema salsugineum HOM05D007022 ORTHO05D008868 1.6e-48 196.8 137 68.6
COL.COLO4_32660 Corchorus olitorius HOM05D007022 ORTHO05D003154 3.5e-48 195.7 115 75.7
BcaB06g25978 Brassica carinata HOM05D007022 ORTHO05D008868 6.0e-48 194.9 107 79.4
Gohir.A13G040100 Gossypium hirsutum HOM05D007022 ORTHO05D008868 6.0e-48 194.9 147 66.0
Gohir.D13G038800 Gossypium hirsutum HOM05D007022 ORTHO05D008868 7.9e-48 194.5 147 66.0
Gorai.013G043500 Gossypium raimondii HOM05D007022 ORTHO05D008868 7.9e-48 194.5 147 66.0
Aa31LG8G6010 Aethionema arabicum HOM05D007022 ORTHO05D008868 1.3e-47 193.7 127 70.1
CiPaw.06G172800 Carya illinoinensis HOM05D007022 ORTHO05D008868 1.8e-47 193.4 120 74.2
BolC5t33329H Brassica oleracea HOM05D007022 ORTHO05D008868 8.7e-47 191.0 124 70.2
A05p30420 Brassica napus HOM05D007022 ORTHO05D008868 1.1e-46 190.7 129 69.0
BraA05t21880Z Brassica rapa HOM05D007022 ORTHO05D008868 1.1e-46 190.7 129 69.0
Carub.0003s1905 Capsella rubella HOM05D007022 ORTHO05D008868 1.9e-46 189.9 128 68.8
BcaC05g28522 Brassica carinata HOM05D007022 ORTHO05D008868 2.5e-46 189.5 142 64.1
CSS0015269 Camellia sinensis var. sinensis HOM05D007022 ORTHO05D008868 2.5e-46 189.5 141 67.4
Haze_10076 Corylus avellana HOM05D007022 ORTHO05D008868 3.3e-46 189.1 150 62.0
Nitab4.5_0012979g0010 Nicotiana tabacum HOM05D007022 ORTHO05D008868 4.3e-46 188.7 103 86.4
Nitab4.5_0005758g0030 Nicotiana tabacum HOM05D007022 ORTHO05D008868 5.7e-46 188.3 161 61.5
Prupe.8G124000 Prunus persica HOM05D007022 ORTHO05D008868 1.3e-45 187.2 119 73.1
Actinidia00443 Actinidia chinensis HOM05D007022 ORTHO05D008868 2.1e-45 186.4 112 75.0
Lj9A358T46 Lonicera japonica HOM05D007022 ORTHO05D008868 2.8e-45 186.0 124 71.8
MD10G1094200 Malus domestica HOM05D007022 ORTHO05D008868 2.8e-45 186.0 128 68.0
Lj4g0019449 Lotus japonicus HOM05D007022 ORTHO05D008868 6.3e-45 184.9 119 71.4
FvH4_2g06130 Fragaria vesca HOM05D007022 ORTHO05D008868 8.2e-45 184.5 120 70.0
ECA240G1411 Erigeron canadensis HOM05D007022 ORTHO05D008868 2.4e-44 183.0 136 64.7
PSO675G2542 Papaver somniferum HOM05D007022 ORTHO05D008868 3.1e-44 182.6 125 70.4
RcHm_v2.0_Chr6g0257061 Rosa chinensis HOM05D007022 ORTHO05D008868 3.1e-44 182.6 119 70.6
Hund00236 Selenicereus undatus HOM05D007022 ORTHO05D008868 4.1e-44 182.2 142 62.0
CANSAT25G3754 Cannabis sativa HOM05D007022 ORTHO05D008868 1.2e-43 180.6 113 71.7
Sed0002892 Sechium edule HOM05D007022 ORTHO05D008868 1.2e-43 180.6 117 69.2
HPP92_016383 Vanilla planifolia HOM05D002198 ORTHO05D008868 1.2e-43 180.6 107 70.1
Lsat_1_v5_gn_9_110080 Lactuca sativa HOM05D007022 ORTHO05D008868 1.5e-43 180.3 120 71.7
Sc08g0000700 Simmondsia chinensis HOM05D005091 ORTHO05D006047 2.0e-43 179.9 109 73.4
PSO541G2619 Papaver somniferum HOM05D007022 ORTHO05D008868 2.6e-43 179.5 118 72.9
THA.LOC104798819 Tarenaya hassleriana HOM05D007022 ORTHO05D008868 5.9e-43 178.3 96 83.3
HanXRQChr09g0251721 Helianthus annuus HOM05D007022 ORTHO05D008868 7.6e-43 177.9 140 62.1
TWI75G1380 Tripterygium wilfordii HOM05D007022 ORTHO05D008868 1.0e-42 177.6 114 69.3
Oeu013707.1 Olea europaea HOM05D007022 ORTHO05D008868 1.3e-42 177.2 103 77.7
Sopen10g021420 Solanum pennellii HOM05D007022 ORTHO05D008868 1.3e-42 177.2 99 78.8
VMungo0251G0366 Vigna mungo HOM05D007022 ORTHO05D008868 3.8e-42 175.6 126 65.9
CsaV3_3G018570 Cucumis sativus L. HOM05D007022 ORTHO05D008868 5.0e-42 175.3 114 68.4
FAN24G2553 Fragaria x ananassa HOM05D007022 ORTHO05D008868 5.0e-42 175.3 96 76.0
Atru.chr5.2709 Acer truncatum HOM05D007022 ORTHO05D008868 8.5e-42 174.5 142 59.9
arahy.Tifrunner.gnm1.ann1.WB2CJ6 Arachis hypogaea HOM05D007022 ORTHO05D008868 1.1e-41 174.1 98 75.5
MELO3C019509.2 Cucumis melo HOM05D007022 ORTHO05D008868 1.9e-41 173.3 138 60.9
FAN15G0654 Fragaria x ananassa HOM05D007022 ORTHO05D008868 2.5e-41 172.9 95 75.8
FAN20G2768 Fragaria x ananassa HOM05D007022 ORTHO05D008868 7.2e-41 171.4 95 74.7
Zm00001eb100830 Zea mays HOM05D007022 ORTHO05D008868 7.2e-41 171.4 120 65.0
arahy.Tifrunner.gnm1.ann1.059Z6S Arachis hypogaea HOM05D007022 ORTHO05D008868 9.3e-41 171.0 113 69.0
ClCG05G010000 Citrullus lanatus HOM05D007022 ORTHO05D008868 1.2e-40 170.6 139 60.4
Ca_18680_v3 Cicer arietinum L. HOM05D007022 ORTHO05D008868 2.7e-40 169.5 119 65.5
TPR.G28492 Trifolium pratense HOM05D007022 ORTHO05D008868 1.0e-39 167.5 117 64.1
Lalb_Chr16g0384701 Lupinus albus HOM05D007022 ORTHO05D008868 1.3e-39 167.2 140 59.3
Phvul.003G292600 Phaseolus vulgaris HOM05D007022 ORTHO05D008868 6.7e-39 164.9 113 67.3
EL10Ac9g21683 Beta vulgaris HOM05D007022 ORTHO05D008868 8.7e-39 164.5 106 71.7
Psat7g125000 Pisum sativum HOM05D007022 ORTHO05D008868 8.7e-39 164.5 117 63.2
ATR0100G054 Amborella trichopoda HOM05D007022 ORTHO05D008868 1.5e-38 163.7 126 61.1
Glyma.02G132900 Glycine max HOM05D007022 ORTHO05D008868 7.4e-38 161.4 113 66.4
Glyma.07G212100 Glycine max HOM05D007022 ORTHO05D008868 1.3e-37 160.6 113 66.4
Ah.01g019040 Amaranthus hybridus HOM05D007022 ORTHO05D008868 1.2e-35 154.1 131 58.0
Os09g0458400 Oryza sativa ssp. japonica HOM05D007022 ORTHO05D008868 4.5e-35 152.1 89 74.2
Medtr4g086255 Medicago truncatula HOM05D007022 ORTHO05D008868 3.8e-34 149.1 83 77.1
CDE03G0325 Ceratophyllum demersum HOM05D007022 ORTHO05D008868 1.4e-31 140.6 78 78.2
AUR62016784 Chenopodium quinoa HOM05D007022 ORTHO05D008868 2.3e-31 139.8 107 59.8
CBR_g29933 Chara braunii HOM05D007022 ORTHO05D008868 3.9e-31 139.0 118 55.9
Pp3c1_42880 Physcomitrium patens HOM05D007022 ORTHO05D008868 1.1e-28 131.0 107 57.9
Pp3c2_400 Physcomitrium patens HOM05D007022 ORTHO05D008868 5.9e-27 125.2 109 52.3
AagrBONN_evm.TU.Sc2ySwM_368.1030 Anthoceros agrestis HOM05D007022 ORTHO05D008868 1.7e-26 123.6 101 52.5
SMO232G0067 Selaginella moellendorffii HOM05D007022 ORTHO05D008868 1.1e-25 120.9 92 58.7
Sopen10g021450 Solanum pennellii HOM05D007022 ORTHO05D008868 2.1e-24 116.7 88 62.5
Mapoly0186s0009 Marchantia polymorpha HOM05D007022 ORTHO05D008868 3.6e-24 115.9 113 51.3
Sabra09G0078400 Salix brachista HOM05D007022 ORTHO05D008868 2.6e-22 109.8 129 48.8
Cfa004517 Carpinus fangiana HOM05D007022 ORTHO05D008868 2.5e-17 93.2 53 77.4
DCAR_022028 Daucus carota HOM05D007022 ORTHO05D008868 7.2e-17 91.7 76 61.8
SEGI_10031 Sequoiadendron giganteum HOM05D007022 ORTHO05D008868 2.1e-16 90.1 72 58.3
PGSC0003DMG400006210 Solanum tuberosum HOM05D007022 ORTHO05D008868 2.1e-16 90.1 55 74.5
Rhsim11G0166200 Rhododendron simsii HOM05D007022 ORTHO05D008868 6.7e-15 85.1 74 59.5
CARHR094630 Cardamine hirsuta HOM05D007022 ORTHO05D008868 5.7e-14 82.0 44 79.5
ECA240G0576 Erigeron canadensis HOM05D007022 ORTHO05D008868 8.2e-13 78.2 61 62.3
Cre07.g339200 Chlamydomonas reinhardtii HOM05D007022 ORTHO05D008868 1.2e-08 64.3 101 33.7


User provided reference genes

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