Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc01g106380.2 Solanum lycopersicum HOM05D007716 ORTHO05D009780 5.1e-96 354.4 176 100.0
PGSC0003DMG400003116 Solanum tuberosum HOM05D007716 ORTHO05D009780 2.7e-81 305.4 179 88.8
Sopen01g048750 Solanum pennellii HOM05D007716 ORTHO05D009780 1.6e-73 279.6 150 95.3
Nitab4.5_0010352g0060 Nicotiana tabacum HOM05D007716 ORTHO05D009780 1.3e-46 190.3 126 75.4
Nitab4.5_0009020g0070 Nicotiana tabacum HOM05D007716 ORTHO05D009780 4.9e-46 188.3 126 74.6
Peaxi162Scf00299g00026 Petunia axillaris HOM05D007716 ORTHO05D009780 1.0e-43 180.6 137 70.8
Manes.10G092200 Manihot esculenta HOM05D007716 ORTHO05D009780 8.9e-40 167.5 173 52.6
Prupe.8G076600 Prunus persica HOM05D007716 ORTHO05D009780 2.4e-37 159.5 173 51.4
QL11p026900 Quercus lobata HOM05D007716 ORTHO05D009780 3.9e-35 152.1 149 54.4
Hma1.2p1_0703F.1_g206280 Hydrangea macrophylla HOM05D007716 ORTHO05D009780 6.6e-35 151.4 171 48.5
Ciclev10029299m.g Citrus clementina HOM05D007716 ORTHO05D009780 1.9e-34 149.8 175 49.7
Potri.009G080400 Populus trichocarpa HOM05D007716 ORTHO05D009780 1.9e-34 149.8 172 49.4
Gohir.D12G040700 Gossypium hirsutum HOM05D007716 ORTHO05D009780 7.3e-34 147.9 156 50.0
Oeu059885.1 Olea europaea HOM05D007716 ORTHO05D009780 2.8e-33 146.0 168 51.2
Gorai.008G042500 Gossypium raimondii HOM05D007716 ORTHO05D009780 3.6e-33 145.6 156 49.4
Sabra09G0062200 Salix brachista HOM05D007716 ORTHO05D009780 3.6e-33 145.6 170 49.4
Cpa.g.sc20.53 Carica papaya HOM05D007716 ORTHO05D009780 1.8e-32 143.3 175 46.3
CiPaw.05G026000 Carya illinoinensis HOM05D007716 ORTHO05D009780 1.8e-32 143.3 140 52.9
Gohir.A12G031600 Gossypium hirsutum HOM05D007716 ORTHO05D009780 1.8e-32 143.3 156 49.4
PGR142G1403 Punica granatum HOM05D007716 ORTHO05D009780 2.4e-32 142.9 173 45.7
MSTRG.16641 Avicennia marina HOM05D007716 ORTHO05D009780 3.1e-32 142.5 176 44.3
Cc02_g20520 Coffea canephora HOM05D007716 ORTHO05D009780 3.1e-32 142.5 180 45.0
Haze_10368 Corylus avellana HOM05D007716 ORTHO05D009780 4.0e-32 142.1 170 47.6
COL.COLO4_17851 Corchorus olitorius HOM05D007716 ORTHO05D009780 1.2e-31 140.6 174 48.3
Duzib132G0367 Durio zibethinus HOM05D007716 ORTHO05D009780 1.2e-31 140.6 157 49.0
TAR628G0805 Trochodendron aralioides HOM05D007716 ORTHO05D009780 2.6e-31 139.4 170 49.4
TWI23G0541 Tripterygium wilfordii HOM05D007716 ORTHO05D009780 3.4e-31 139.0 170 47.1
Nn5g29758 Nelumbo nucifera HOM05D007716 ORTHO05D009780 4.4e-31 138.7 162 46.9
Potri.001G286200 Populus trichocarpa HOM05D007716 ORTHO05D009780 4.4e-31 138.7 170 47.6
Atru.chr6.1374 Acer truncatum HOM05D007716 ORTHO05D009780 2.9e-30 136.0 168 45.2
Sabra16G0178700 Salix brachista HOM05D007716 ORTHO05D009780 2.9e-30 136.0 170 45.9
Thecc.02G037300 Theobroma cacao HOM05D007716 ORTHO05D009780 2.9e-30 136.0 178 46.1
Aqoxy6G00623 Aquilegia oxysepala HOM05D000043 ORTHO05D002888 6.4e-30 134.8 172 47.7
CANSAT54G1223 Cannabis sativa HOM05D007716 ORTHO05D009780 3.2e-29 132.5 180 42.8
SalBow6G6774 Salvia bowleyana HOM05D007716 ORTHO05D009780 5.4e-29 131.7 159 42.1
ClCG10G009750 Citrullus lanatus HOM05D007716 ORTHO05D009780 1.2e-28 130.6 120 57.5
MD10G1057800 Malus domestica HOM05D007716 ORTHO05D009780 2.1e-28 129.8 128 55.5
PSO210G3893 Papaver somniferum HOM05D007716 ORTHO05D009780 4.6e-28 128.6 172 43.0
PSO761G0345 Papaver somniferum HOM05D007716 ORTHO05D009780 1.3e-27 127.1 172 42.4
A06p31220 Brassica napus HOM05D007716 ORTHO05D009780 1.9e-26 123.2 125 54.4
C03p61760 Brassica napus HOM05D007716 ORTHO05D009780 1.9e-26 123.2 123 52.8
BolC3t18437H Brassica oleracea HOM05D007716 ORTHO05D009780 1.9e-26 123.2 123 52.8
AT5G64480 Arabidopsis thaliana HOM05D007716 ORTHO05D009780 3.3e-26 122.5 177 40.7
BraA06t26061Z Brassica rapa HOM05D007716 ORTHO05D009780 4.3e-26 122.1 125 53.6
RcHm_v2.0_Chr6g0269271 Rosa chinensis HOM05D007716 ORTHO05D009780 4.3e-26 122.1 175 42.3
Sp2g27560 Schrenkiella parvula HOM05D007716 ORTHO05D009780 4.3e-26 122.1 178 41.0
Migut.B00514 Erythranthe guttata HOM05D007716 ORTHO05D009780 7.3e-26 121.3 173 39.9
BcaC01g02685 Brassica carinata HOM05D007716 ORTHO05D009780 9.6e-26 120.9 123 52.0
MBI16_g17833_MAGBIO Magnolia biondii HOM05D007716 ORTHO05D009780 2.1e-25 119.8 114 50.0
THA.LOC104799649 Tarenaya hassleriana HOM05D007716 ORTHO05D009780 2.1e-25 119.8 124 49.2
CARHR278450 Cardamine hirsuta HOM05D007716 ORTHO05D009780 2.8e-25 119.4 122 50.0
Lalb_Chr20g0122741 Lupinus albus HOM05D007716 ORTHO05D009780 2.8e-25 119.4 140 43.6
AL8G41850 Arabidopsis lyrata HOM05D007716 ORTHO05D009780 3.6e-25 119.0 174 40.2
Phvul.006G198900 Phaseolus vulgaris HOM05D007716 ORTHO05D009780 3.6e-25 119.0 144 43.8
FvH4_2g11070 Fragaria vesca HOM05D007716 ORTHO05D009780 4.7e-25 118.6 172 41.9
Lj6g0015505 Lotus japonicus HOM05D007716 ORTHO05D009780 4.7e-25 118.6 170 41.2
FAN20G1331 Fragaria x ananassa HOM05D007716 ORTHO05D009780 6.2e-25 118.2 172 41.3
Ah.01g024230 Amaranthus hybridus HOM05D007716 ORTHO05D009780 1.1e-24 117.5 130 45.4
VMungo0540G1513 Vigna mungo HOM05D007716 ORTHO05D009780 1.4e-24 117.1 144 43.1
AUR62043644 Chenopodium quinoa HOM05D007716 ORTHO05D009780 2.4e-24 116.3 139 46.8
FAN24G2612 Fragaria x ananassa HOM05D007716 ORTHO05D009780 2.4e-24 116.3 172 41.3
Glyma.13G254000 Glycine max HOM05D007716 ORTHO05D009780 3.1e-24 115.9 170 39.4
FAN15G0824 Fragaria x ananassa HOM05D007716 ORTHO05D009780 5.2e-24 115.2 172 41.3
Lsat_1_v5_gn_7_83180 Lactuca sativa HOM05D007716 ORTHO05D009780 5.2e-24 115.2 130 43.1
SGA_v2.0_scaffold342G49411 Striga asiatica HOM05D007716 ORTHO05D009780 6.9e-24 114.8 141 42.6
AUR62027073 Chenopodium quinoa HOM05D007716 ORTHO05D009780 1.2e-23 114.0 139 46.0
vmacro01903 Vaccinium macrocarpon HOM05D001206 ORTHO05D002068 1.5e-23 113.6 111 53.2
Thhalv10004965m.g Eutrema salsugineum HOM05D007716 ORTHO05D009780 2.0e-23 113.2 128 47.7
FAN27G0331 Fragaria x ananassa HOM05D007716 ORTHO05D009780 3.4e-23 112.5 172 40.7
Glyma.15G060900 Glycine max HOM05D007716 ORTHO05D009780 4.4e-23 112.1 170 39.4
CsaV3_4G014630 Cucumis sativus L. HOM05D007716 ORTHO05D009780 1.3e-22 110.5 108 54.6
Sed0024047 Sechium edule HOM05D007716 ORTHO05D009780 1.7e-22 110.2 120 48.3
TPR.G32644 Trifolium pratense HOM05D007716 ORTHO05D009780 3.8e-22 109.0 145 45.5
Ca_00186_v3 Cicer arietinum L. HOM05D007716 ORTHO05D009780 4.9e-22 108.6 145 39.3
Carub.0008s2527 Capsella rubella HOM05D007716 ORTHO05D009780 6.4e-22 108.2 124 45.2
Aa31LG1G17430 Aethionema arabicum HOM05D007716 ORTHO05D009780 8.4e-22 107.8 126 46.0
ECA236G5147 Erigeron canadensis HOM05D007716 ORTHO05D009780 1.4e-21 107.1 108 47.2
unitig_61.g26045 Utricularia gibba HOM05D007716 ORTHO05D009780 1.4e-21 107.1 117 46.2
DCAR_029284 Daucus carota HOM05D007716 ORTHO05D009780 1.9e-21 106.7 125 45.6
Medtr2g010200 Medicago truncatula HOM05D007716 ORTHO05D009780 3.2e-21 105.9 147 41.5
Sc14g0003580 Simmondsia chinensis HOM05D007716 ORTHO05D009780 3.2e-21 105.9 137 43.1
Peaxi162Scf00299g00025 Petunia axillaris HOM05D007716 ORTHO05D009780 5.4e-21 105.1 65 75.4
Psat1g212560 Pisum sativum HOM05D007716 ORTHO05D009780 2.1e-20 103.2 131 41.2
Eucgr.I02564 Eucalyptus grandis HOM05D007716 ORTHO05D009780 1.7e-19 100.1 118 43.2
arahy.Tifrunner.gnm1.ann1.1SXR49 Arachis hypogaea HOM05D007716 ORTHO05D009780 3.0e-19 99.4 167 35.3
arahy.Tifrunner.gnm1.ann1.84YYIV Arachis hypogaea HOM05D007716 ORTHO05D009780 5.1e-19 98.6 168 35.1
Dinv08960 Davidia involucrata HOM05D007716 ORTHO05D009780 1.5e-18 97.1 68 64.7
Actinidia02415 Actinidia chinensis HOM05D007716 ORTHO05D009780 3.3e-18 95.9 158 42.4
ATR0767G063 Amborella trichopoda HOM05D007716 ORTHO05D009780 2.4e-16 89.7 156 33.3
CDE04G3440 Ceratophyllum demersum HOM05D000620 ORTHO05D000537 1.2e-15 87.4 128 35.9
Eucgr.I02552 Eucalyptus grandis HOM05D007716 ORTHO05D009780 2.6e-15 86.3 137 38.0
Lj9P341T42 Lonicera japonica HOM05D007716 ORTHO05D009780 3.8e-14 82.4 68 54.4
Actinidia23910 Actinidia chinensis HOM05D001242 ORTHO05D001089 1.6e-09 67.0 49 65.3
TAR376G1104 Trochodendron aralioides HOM05D007716 ORTHO05D009780 2.8e-09 66.2 65 53.8
ATR0144G021 Amborella trichopoda HOM05D007716 ORTHO05D009780 4.9e-06 55.5 84 36.9


User provided reference genes

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