Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc01g106070.2 Solanum lycopersicum HOM05D000650 ORTHO05D051233 4.7e-93 344.7 203 100.0
PGSC0003DMG400010683 Solanum tuberosum HOM05D000650 ORTHO05D051233 1.5e-67 260.0 286 62.9
Nitab4.5_0002750g0080 Nicotiana tabacum HOM05D000650 ORTHO05D007302 6.1e-24 115.2 295 39.7
Nitab4.5_0005908g0030 Nicotiana tabacum HOM05D000650 ORTHO05D007302 7.9e-16 88.2 233 40.3
Peaxi162Scf00299g00342 Petunia axillaris HOM05D000650 ORTHO05D007302 2.3e-15 86.7 216 41.2
Duzib248G1171 Durio zibethinus HOM05D000650 ORTHO05D007302 5.1e-15 85.5 207 30.0
Nitab4.5_0012000g0010 Nicotiana tabacum HOM05D000650 ORTHO05D007302 3.3e-14 82.8 230 30.0
Gohir.A03G178000 Gossypium hirsutum HOM05D000650 ORTHO05D007302 7.4e-14 81.6 245 29.4
Gohir.D02G201700 Gossypium hirsutum HOM05D000650 ORTHO05D007302 1.4e-12 77.4 245 30.2
Gorai.005G226700 Gossypium raimondii HOM05D000650 ORTHO05D007302 6.9e-12 75.1 245 27.8
Nitab4.5_0001259g0050 Nicotiana tabacum HOM05D000650 ORTHO05D007302 6.9e-12 75.1 234 29.1
QL11p025817 Quercus lobata HOM05D000650 ORTHO05D007302 7.7e-11 71.6 234 25.6
DCAR_001849 Daucus carota HOM05D000650 ORTHO05D007302 8.5e-10 68.2 259 26.3
SalBow6G1286 Salvia bowleyana HOM05D000650 ORTHO05D007302 7.2e-09 65.1 214 24.8
Sabra17G0113500 Salix brachista HOM05D000650 ORTHO05D007302 1.2e-08 64.3 237 24.9
GSVIVG01012543001 Vitis vinifera HOM05D000650 ORTHO05D007302 2.1e-08 63.5 65 44.6
Duzib132G0086 Durio zibethinus HOM05D000650 ORTHO05D007302 4.7e-08 62.4 248 25.0
GSVIVG01000327001 Vitis vinifera HOM05D000650 ORTHO05D007302 6.1e-08 62.0 65 43.1
Haze_10689 Corylus avellana HOM05D000650 ORTHO05D007302 7.9e-08 61.6 275 24.4
GSVIVG01000320001 Vitis vinifera HOM05D000650 ORTHO05D007302 7.9e-08 61.6 65 43.1
GSVIVG01000325001 Vitis vinifera HOM05D000650 ORTHO05D000735 7.9e-08 61.6 65 43.1
Haze_10698 Corylus avellana HOM05D000650 ORTHO05D000735 1.0e-07 61.2 66 43.9
GSVIVG01000330001 Vitis vinifera HOM05D000650 ORTHO05D007302 1.0e-07 61.2 65 41.5
Lj5A228G43 Lonicera japonica HOM05D000650 ORTHO05D007302 1.4e-07 60.8 253 26.1
TWI59G0327 Tripterygium wilfordii HOM05D000650 ORTHO05D007302 1.4e-07 60.8 54 51.9
Oeu063550.2 Olea europaea HOM05D000650 ORTHO05D007302 1.8e-07 60.5 52 51.9
GSVIVG01012547001 Vitis vinifera HOM05D000650 ORTHO05D000735 1.8e-07 60.5 65 41.5
Aqoxy6G00817_Aqoxy6G00818 Aquilegia oxysepala HOM05D000650 ORTHO05D010020 2.3e-07 60.1 196 28.6
Prupe.8G072900 Prunus persica HOM05D000650 ORTHO05D007302 2.3e-07 60.1 65 47.7
Sopen10g018090 Solanum pennellii HOM05D000650 ORTHO05D007302 2.3e-07 60.1 310 23.9
GSVIVG01000324001 Vitis vinifera HOM05D000650 ORTHO05D000735 2.3e-07 60.1 65 40.0
SGA_v2.0_scaffold83G26387 Striga asiatica HOM05D000650 ORTHO05D000735 3.0e-07 59.7 281 24.2
Haze_10696 Corylus avellana HOM05D000650 ORTHO05D007302 3.9e-07 59.3 56 48.2
Lj5A228T42 Lonicera japonica HOM05D000650 ORTHO05D007302 3.9e-07 59.3 65 41.5
CAN.G531.4 Capsicum annuum HOM05D000650 ORTHO05D007302 5.1e-07 58.9 309 24.6
Cfa005605 Carpinus fangiana HOM05D004981 ORTHO05D005635 5.1e-07 58.9 262 24.8
COL.COLO4_32414 Corchorus olitorius HOM05D000650 ORTHO05D007302 5.1e-07 58.9 51 45.1
DCAR_029285 Daucus carota HOM05D000650 ORTHO05D007302 5.1e-07 58.9 186 26.3
CANSAT25G0331 Cannabis sativa HOM05D000650 ORTHO05D010020 6.7e-07 58.5 201 24.4
PGSC0003DMG400029015 Solanum tuberosum HOM05D000650 ORTHO05D007302 6.7e-07 58.5 65 41.5
TWI14G0488 Tripterygium wilfordii HOM05D000650 ORTHO05D007302 6.7e-07 58.5 283 23.0
Dinv08988 Davidia involucrata HOM05D000650 ORTHO05D000735 8.8e-07 58.2 52 51.9
RcHm_v2.0_Chr6g0270151 Rosa chinensis HOM05D000650 ORTHO05D007302 1.1e-06 57.8 65 40.0
FAN20G2101 Fragaria x ananassa HOM05D000650 ORTHO05D007302 1.5e-06 57.4 52 48.1
GSVIVG01038510001 Vitis vinifera HOM05D000650 ORTHO05D007302 1.5e-06 57.4 65 40.0
Migut.B00537 Erythranthe guttata HOM05D000650 ORTHO05D000735 3.3e-06 56.2 50 50.0
Prupe.8G228800 Prunus persica HOM05D000650 ORTHO05D000735 3.3e-06 56.2 65 41.5
TWI14G0262 Tripterygium wilfordii HOM05D000650 ORTHO05D000735 3.3e-06 56.2 56 46.4
Solyc10g047670.2 Solanum lycopersicum HOM05D000650 ORTHO05D007302 4.4e-06 55.8 309 23.0
FAN24G3507 Fragaria x ananassa HOM05D000650 ORTHO05D007302 5.7e-06 55.5 70 40.0
FvH4_2g11420 Fragaria vesca HOM05D000650 ORTHO05D007302 7.4e-06 55.1 70 38.6
FvH4_2g11450 Fragaria vesca HOM05D000650 ORTHO05D007302 7.4e-06 55.1 52 48.1
FAN24G2673 Fragaria x ananassa HOM05D000650 ORTHO05D000735 7.4e-06 55.1 52 48.1
Manes.10G096300 Manihot esculenta HOM05D000650 ORTHO05D007302 7.4e-06 55.1 220 26.4
Thecc.02G127100 Theobroma cacao HOM05D000650 ORTHO05D007302 7.4e-06 55.1 259 23.6
FAN15G2135 Fragaria x ananassa HOM05D000650 ORTHO05D007302 9.7e-06 54.7 52 46.2


User provided reference genes

Program Settings