Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc01g103595.1 Solanum lycopersicum HOM05D001047 ORTHO05D000768 7.0e-69 263.8 134 100.0
Sopen01g045960 Solanum pennellii HOM05D001047 ORTHO05D000768 1.7e-67 259.2 133 97.7
CAN.G2125.1 Capsicum annuum HOM05D001047 ORTHO05D000768 6.2e-33 144.4 112 73.2
Nitab4.5_0000787g0240 Nicotiana tabacum HOM05D001047 ORTHO05D000768 4.9e-30 134.8 124 66.1
Nitab4.5_0007295g0020 Nicotiana tabacum HOM05D001047 ORTHO05D000768 9.2e-29 130.6 124 64.5
Peaxi162Scf00011g01124 Petunia axillaris HOM05D001047 ORTHO05D000768 4.6e-28 128.3 145 55.2
PGSC0003DMG400024918 Solanum tuberosum HOM05D016720 ORTHO05D000768 5.0e-27 124.8 93 76.3
Dinv19403 Davidia involucrata HOM05D000943 ORTHO05D010024 1.6e-12 76.6 113 41.6
Actinidia39007 Actinidia chinensis HOM05D001047 ORTHO05D000768 7.8e-12 74.3 116 42.2
MD15G1434400 Malus domestica HOM05D001047 ORTHO05D000768 1.0e-11 73.9 111 44.1
Dinv07479 Davidia involucrata HOM05D001047 ORTHO05D000768 3.9e-11 72.0 118 42.4
Cpa.g.sc113.51 Carica papaya HOM05D001047 ORTHO05D000768 6.6e-11 71.2 148 34.5
FvH4_5g11290 Fragaria vesca HOM05D001047 ORTHO05D000768 1.1e-10 70.5 118 38.1
FAN18G2883 Fragaria x ananassa HOM05D001047 ORTHO05D000768 1.1e-10 70.5 118 38.1
FAN04G1998 Fragaria x ananassa HOM05D001047 ORTHO05D000768 1.9e-10 69.7 118 37.3
Thecc.02G019400 Theobroma cacao HOM05D001047 ORTHO05D000768 2.5e-10 69.3 112 42.0
FAN13G0404 Fragaria x ananassa HOM05D001047 ORTHO05D000768 4.3e-10 68.6 118 37.3
FAN08G1269 Fragaria x ananassa HOM05D001047 ORTHO05D000768 1.2e-09 67.0 142 34.5
CSS0011019 Camellia sinensis var. sinensis HOM05D001047 ORTHO05D000768 1.6e-09 66.6 116 39.7
SEGI_14779 Sequoiadendron giganteum HOM05D001047 ORTHO05D000768 1.6e-09 66.6 113 38.9
QL02p100330 Quercus lobata HOM05D016720 ORTHO05D036967 3.6e-09 65.5 119 38.7
COL.COLO4_17732 Corchorus olitorius HOM05D001047 ORTHO05D000768 4.7e-09 65.1 126 38.1
Hma1.2p1_0884F.1_g232490 Hydrangea macrophylla HOM05D001047 ORTHO05D000768 8.1e-09 64.3 120 38.3
GSVIVG01023256001 Vitis vinifera HOM05D001047 ORTHO05D000768 1.1e-08 63.9 117 37.6
Manes.07G023500 Manihot esculenta HOM05D001047 ORTHO05D000768 3.1e-08 62.4 116 37.1
Dinv20411 Davidia involucrata HOM05D001047 ORTHO05D000768 8.9e-08 60.8 122 36.9
Prupe.1G578500 Prunus persica HOM05D016720 ORTHO05D000768 1.5e-07 60.1 68 50.0
SEGI_02697 Sequoiadendron giganteum HOM05D001047 ORTHO05D000768 1.5e-07 60.1 89 43.8
HanXRQChr04g0125901 Helianthus annuus HOM05D001047 ORTHO05D000768 2.0e-07 59.7 128 32.0
SalBow5G2121 Salvia bowleyana HOM05D001047 ORTHO05D000768 2.6e-07 59.3 97 41.2
Nn5g27879 Nelumbo nucifera HOM05D001047 ORTHO05D000768 3.4e-07 58.9 108 34.3
SEGI_09469 Sequoiadendron giganteum HOM05D012961 ORTHO05D000768 3.4e-07 58.9 109 36.7
SEGI_26161 Sequoiadendron giganteum HOM05D012961 ORTHO05D000768 4.4e-07 58.5 105 38.1
Cfa004494 Carpinus fangiana HOM05D016720 ORTHO05D000768 5.8e-07 58.2 115 40.0
Manes.09G186200 Manihot esculenta HOM05D006285 ORTHO05D007249 5.8e-07 58.2 79 48.1
SEGI_23736 Sequoiadendron giganteum HOM05D006285 ORTHO05D007249 5.8e-07 58.2 109 38.5
A02p19630 Brassica napus HOM05D001047 ORTHO05D000768 7.6e-07 57.8 104 38.5
BraA02t06999Z Brassica rapa HOM05D001047 ORTHO05D000768 7.6e-07 57.8 104 38.5
Solyc08g036505.2 Solanum lycopersicum HOM05D002924 ORTHO05D003122 1.3e-06 57.0 109 37.6
Lalb_Chr12g0200271 Lupinus albus HOM05D001047 ORTHO05D000768 1.7e-06 56.6 85 42.4
PSO724G1109 Papaver somniferum HOM05D001047 ORTHO05D000768 2.2e-06 56.2 124 33.1
BolC2t09254H Brassica oleracea HOM05D001047 ORTHO05D000768 2.9e-06 55.8 104 36.5
PSO386G0059 Papaver somniferum HOM05D001047 ORTHO05D000768 2.9e-06 55.8 124 33.1
Zm00001eb068050 Zea mays HOM05D001047 ORTHO05D000768 3.8e-06 55.5 98 37.8
Duzib248G1203 Durio zibethinus HOM05D006285 ORTHO05D007249 4.9e-06 55.1 92 43.5
GSVIVG01000967001 Vitis vinifera HOM05D006285 ORTHO05D007249 4.9e-06 55.1 91 40.7
C02p32160 Brassica napus HOM05D001047 ORTHO05D000768 8.4e-06 54.3 104 36.5
CDE06G1494 Ceratophyllum demersum HOM05D006285 ORTHO05D007249 8.4e-06 54.3 79 43.0


User provided reference genes

Program Settings