Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc01g102670.3 Solanum lycopersicum HOM05D005167 ORTHO05D006312 1.5e-283 978.8 484 100.0
Sopen01g045080 Solanum pennellii HOM05D005167 ORTHO05D006312 6.9e-276 953.4 484 97.7
PGSC0003DMG400018222 Solanum tuberosum HOM05D005167 ORTHO05D006312 7.2e-257 890.2 487 92.2
CAN.G1379.23 Capsicum annuum HOM05D005167 ORTHO05D006312 3.3e-230 801.6 485 84.1
Nitab4.5_0001085g0040 Nicotiana tabacum HOM05D005167 ORTHO05D006312 1.3e-226 789.6 492 81.3
Nitab4.5_0004176g0010 Nicotiana tabacum HOM05D005167 ORTHO05D006312 1.8e-223 779.2 483 82.2
Peaxi162Scf00194g00934 Petunia axillaris HOM05D005167 ORTHO05D006312 1.2e-211 740.0 492 76.4
Hma1.2p1_0052F.1_g030120 Hydrangea macrophylla HOM05D005167 ORTHO05D006312 2.1e-155 553.1 477 61.0
Dinv24548 Davidia involucrata HOM05D000457 ORTHO05D000560 5.8e-150 535.0 510 56.1
Lj9C241G5 Lonicera japonica HOM05D005167 ORTHO05D006312 1.4e-143 513.8 470 58.7
Oeu000168.1 Olea europaea HOM05D005167 ORTHO05D006312 3.3e-137 492.7 466 57.7
vmacro19812 Vaccinium macrocarpon HOM05D005167 ORTHO05D006312 7.7e-134 481.5 486 57.4
SalBow3G4053 Salvia bowleyana HOM05D005167 ORTHO05D006312 1.1e-132 477.6 468 56.4
Cc02_g36800 Coffea canephora HOM05D005167 ORTHO05D006312 9.4e-132 474.6 447 57.5
Rhsim05G0120900 Rhododendron simsii HOM05D005167 ORTHO05D006312 7.9e-131 471.5 484 57.6
DCAR_029460 Daucus carota HOM05D005167 ORTHO05D006312 2.2e-128 463.4 474 52.3
Atru.chr6.56 Acer truncatum HOM05D005167 ORTHO05D006312 1.4e-127 460.7 467 53.7
SGA_v2.0_scaffold401G50971 Striga asiatica HOM05D005167 ORTHO05D006312 1.8e-127 460.3 471 52.7
ECA248G1565 Erigeron canadensis HOM05D005167 ORTHO05D006312 2.4e-127 459.9 473 52.6
Migut.N00879 Erythranthe guttata HOM05D005167 ORTHO05D006312 1.0e-125 454.5 469 53.3
Nn5g27095 Nelumbo nucifera HOM05D005167 ORTHO05D006312 3.2e-124 449.5 487 51.7
Haze_09951 Corylus avellana HOM05D005167 ORTHO05D006312 5.5e-124 448.7 467 54.0
PGR042G3689 Punica granatum HOM05D005167 ORTHO05D006312 2.6e-121 439.9 480 50.6
Ciclev10001110m.g Citrus clementina HOM05D005167 ORTHO05D006312 6.3e-120 435.3 481 52.0
Thecc.06G025200 Theobroma cacao HOM05D005167 ORTHO05D006312 1.1e-119 434.5 475 51.6
HanXRQChr15g0488451 Helianthus annuus HOM05D005167 ORTHO05D006312 2.4e-119 433.3 465 52.5
QL02p104239 Quercus lobata HOM05D005167 ORTHO05D006312 9.1e-119 431.4 475 51.4
arahy.Tifrunner.gnm1.ann1.JG47X3 Arachis hypogaea HOM05D005167 ORTHO05D006312 6.5e-117 425.2 466 51.5
Ah.02g128610 Amaranthus hybridus HOM05D005167 ORTHO05D006312 4.2e-116 422.5 462 50.2
EL10Ac6g13938 Beta vulgaris HOM05D005167 ORTHO05D006312 7.2e-116 421.8 444 51.4
Gohir.D05G124100 Gossypium hirsutum HOM05D005167 ORTHO05D006312 2.1e-115 420.2 478 49.2
Gorai.009G128100 Gossypium raimondii HOM05D005167 ORTHO05D006312 4.7e-115 419.1 485 49.1
TWI23G0323 Tripterygium wilfordii HOM05D005167 ORTHO05D006312 4.7e-115 419.1 490 50.6
CiPaw.09G096800 Carya illinoinensis HOM05D005167 ORTHO05D006312 2.3e-114 416.8 429 54.5
arahy.Tifrunner.gnm1.ann1.T4BBUF Arachis hypogaea HOM05D005167 ORTHO05D006312 1.2e-113 414.5 466 50.4
Manes.06G015900 Manihot esculenta HOM05D005167 ORTHO05D006312 7.5e-113 411.8 439 53.1
Sc07g0003350 Simmondsia chinensis HOM05D005167 ORTHO05D006312 1.7e-112 410.6 453 50.3
Sc07g0003360 Simmondsia chinensis HOM05D005167 ORTHO05D006312 1.7e-112 410.6 453 50.3
Lj6g0014124 Lotus japonicus HOM05D005167 ORTHO05D006312 1.2e-110 404.4 473 49.7
Potri.003G046300 Populus trichocarpa HOM05D005167 ORTHO05D006312 5.9e-110 402.1 444 51.1
Glyma.09G018700 Glycine max HOM05D005167 ORTHO05D006312 6.5e-109 398.7 445 51.5
Hund15261 Selenicereus undatus HOM05D005167 ORTHO05D006312 8.5e-109 398.3 466 50.0
Phvul.006G133500 Phaseolus vulgaris HOM05D005167 ORTHO05D006312 3.0e-106 389.8 463 49.5
Sabra03G0019800 Salix brachista HOM05D005167 ORTHO05D006312 6.8e-106 388.7 486 48.1
CANSAT01G2096 Cannabis sativa HOM05D005167 ORTHO05D006312 1.2e-105 387.9 507 47.7
Duzib160G0520 Durio zibethinus HOM05D005167 ORTHO05D006312 2.0e-105 387.1 431 51.3
PSO170G3824 Papaver somniferum HOM05D005167 ORTHO05D006312 7.5e-105 385.2 469 48.0
Os07g0657600 Oryza sativa ssp. japonica HOM05D005167 ORTHO05D006312 4.8e-104 382.5 468 48.1
THA.LOC104809040 Tarenaya hassleriana HOM05D005167 ORTHO05D006312 5.4e-103 379.0 515 45.8
VMungo0540G0564 Vigna mungo HOM05D005167 ORTHO05D006312 7.0e-103 378.6 464 48.3
HPP92_025056 Vanilla planifolia HOM05D005167 ORTHO05D006312 1.3e-101 374.4 475 45.1
Gohir.A05G123200 Gossypium hirsutum HOM05D005167 ORTHO05D006312 6.1e-99 365.5 429 48.5
ATR0782G113 Amborella trichopoda HOM05D005167 ORTHO05D006312 8.0e-99 365.2 469 47.5
Eucgr.G00036 Eucalyptus grandis HOM05D005167 ORTHO05D006312 2.0e-97 360.5 401 50.1
Atru.chr6.45 Acer truncatum HOM05D005167 ORTHO05D006312 6.8e-90 335.5 444 46.2
AUR62024866 Chenopodium quinoa HOM05D005167 ORTHO05D006312 1.7e-88 330.9 393 49.1
Actinidia12290 Actinidia chinensis HOM05D005167 ORTHO05D006312 1.6e-78 297.7 455 40.7
Dinv01746 Davidia involucrata HOM05D005167 ORTHO05D006312 3.5e-78 296.6 450 39.1
Oeu000169.3 Olea europaea HOM05D005167 ORTHO05D006312 5.6e-76 289.3 319 51.1
Thecc.07G187300 Theobroma cacao HOM05D005167 ORTHO05D006312 1.2e-75 288.1 448 38.2
Nn3g20631 Nelumbo nucifera HOM05D005167 ORTHO05D006312 7.5e-73 278.9 451 38.8
Duzib116G0260 Durio zibethinus HOM05D005167 ORTHO05D006312 1.1e-66 258.5 454 36.8
Atru.chr9.69 Acer truncatum HOM05D005167 ORTHO05D006312 4.0e-66 256.5 463 35.4
Gohir.D09G002700 Gossypium hirsutum HOM05D005167 ORTHO05D006312 1.2e-65 255.0 449 35.0
Cpa.g.sc15.42 Carica papaya HOM05D005167 ORTHO05D006312 3.4e-65 253.4 439 36.0
FAN19G3173 Fragaria x ananassa HOM05D005167 ORTHO05D006312 3.4e-65 253.4 453 38.2
CiPaw.15G107300 Carya illinoinensis HOM05D005167 ORTHO05D006312 9.9e-65 251.9 458 36.2
CANSAT64G2797 Cannabis sativa HOM05D005167 ORTHO05D006312 1.3e-64 251.5 449 37.2
FAN26G1264 Fragaria x ananassa HOM05D005167 ORTHO05D006312 1.1e-63 248.4 453 38.2
Sed0010261 Sechium edule HOM05D005167 ORTHO05D006312 2.4e-63 247.3 435 37.0
Aqoxy4G01544 Aquilegia oxysepala HOM05D005167 ORTHO05D006312 3.2e-63 246.9 479 33.8
RcHm_v2.0_Chr3g0496761 Rosa chinensis HOM05D005167 ORTHO05D006312 5.4e-63 246.1 482 36.3
Thhalv10028036m.g Eutrema salsugineum HOM05D005167 ORTHO05D006312 7.8e-62 242.3 431 34.8
Carub.0003s3540 Capsella rubella HOM05D005167 ORTHO05D006312 3.9e-61 240.0 453 32.2
SpUn0422_0010 Schrenkiella parvula HOM05D005167 ORTHO05D006312 4.3e-60 236.5 435 34.7
MD00G1096100 Malus domestica HOM05D005167 ORTHO05D006312 1.2e-59 235.0 466 38.4
QL93p0255_0001 Quercus lobata HOM05D005167 ORTHO05D006312 1.6e-59 234.6 344 43.6
C07p02160 Brassica napus HOM05D005167 ORTHO05D006312 2.8e-59 233.8 434 32.9
BolC7t40625H Brassica oleracea HOM05D005167 ORTHO05D006312 2.8e-59 233.8 434 32.9
A03p66890 Brassica napus HOM05D005167 ORTHO05D006312 3.6e-59 233.4 434 32.9
BraA01t02792Z Brassica rapa HOM05D005167 ORTHO05D006312 3.6e-59 233.4 434 32.9
CARHR046110 Cardamine hirsuta HOM05D005167 ORTHO05D006312 3.6e-59 233.4 432 32.9
BcaB03g16877 Brassica carinata HOM05D005167 ORTHO05D006312 6.2e-59 232.6 432 33.1
Lju225A7G63 Lonicera japonica HOM05D005167 ORTHO05D006312 8.1e-59 232.3 451 35.9
ClCG04G000020 Citrullus lanatus HOM05D005167 ORTHO05D006312 3.4e-57 226.9 440 35.7
MBI17_g35115_MAGBIO Magnolia biondii HOM05D005167 ORTHO05D006312 4.4e-57 226.5 203 57.1
ClCG08G000010 Citrullus lanatus HOM05D005167 ORTHO05D006312 2.2e-56 224.2 440 35.5
CiPaw.15G107200 Carya illinoinensis HOM05D005167 ORTHO05D006312 3.8e-56 223.4 396 35.9
SGA_v2.0_scaffold150G36624 Striga asiatica HOM05D005167 ORTHO05D006312 8.4e-56 222.2 446 33.2
Lsat_1_v5_gn_8_167100 Lactuca sativa HOM05D005167 ORTHO05D006312 1.9e-55 221.1 429 35.4
TAR629G0123 Trochodendron aralioides HOM05D005167 ORTHO05D006312 6.0e-54 216.1 420 34.0
Prupe.4G287800 Prunus persica HOM05D005167 ORTHO05D006312 1.3e-53 214.9 369 37.9
Manes.18G143300 Manihot esculenta HOM05D005167 ORTHO05D006312 5.6e-52 209.5 372 38.4
Manes.18G143000 Manihot esculenta HOM05D005167 ORTHO05D006312 2.4e-50 204.1 447 34.2
Glyma.13G026000 Glycine max HOM05D005167 ORTHO05D006312 6.9e-50 202.6 382 35.3
MELO3C034515.2 Cucumis melo HOM05D005167 ORTHO05D006312 1.3e-48 198.4 444 33.3
GSVIVG01029417001 Vitis vinifera HOM05D005167 ORTHO05D006312 1.3e-48 198.4 361 36.6
TWI31G1352 Tripterygium wilfordii HOM05D005167 ORTHO05D006312 1.7e-48 198.0 347 36.3
Gorai.006G003300 Gossypium raimondii HOM05D005167 ORTHO05D006312 3.8e-48 196.8 351 33.3
Actinidia01647 Actinidia chinensis HOM05D005167 ORTHO05D006312 6.4e-48 196.1 171 59.6
TWI15G0790 Tripterygium wilfordii HOM05D005167 ORTHO05D006312 7.1e-47 192.6 363 36.6
COL.COLO4_11943 Corchorus olitorius HOM05D005167 ORTHO05D006312 1.2e-46 191.8 236 46.2
Ciclev10030405m.g Citrus clementina HOM05D005167 ORTHO05D006312 1.0e-45 188.7 398 32.9
CDE02G4394 Ceratophyllum demersum HOM05D003845 ORTHO05D004161 7.4e-44 182.6 166 51.8
Cc00_g01280 Coffea canephora HOM05D005167 ORTHO05D006312 8.1e-43 179.1 393 32.1
Lju225C0G3 Lonicera japonica HOM05D005167 ORTHO05D006312 8.1e-43 179.1 435 32.2
Gohir.A09G002900 Gossypium hirsutum HOM05D005167 ORTHO05D006312 5.3e-42 176.4 324 32.4
BcaC08g44461 Brassica carinata HOM05D005167 ORTHO05D006312 4.5e-41 173.3 371 31.8
PGSC0003DMG400014526 Solanum tuberosum HOM05D005167 ORTHO05D006312 7.6e-41 172.6 427 30.7
CAN.G989.3 Capsicum annuum HOM05D005167 ORTHO05D006312 9.9e-41 172.2 379 31.1
HanXRQChr12g0386151 Helianthus annuus HOM05D005167 ORTHO05D006312 2.2e-40 171.0 449 27.8
Phvul.L001673 Phaseolus vulgaris HOM05D005167 ORTHO05D006312 8.4e-40 169.1 387 33.1
FvH4_1g27954 Fragaria vesca HOM05D005167 ORTHO05D006312 5.5e-39 166.4 163 52.8
Sopen02g001190 Solanum pennellii HOM05D005167 ORTHO05D006312 7.9e-38 162.5 375 31.5
MBI17_g35871_MAGBIO Magnolia biondii HOM05D005167 ORTHO05D006312 1.3e-37 161.8 106 71.7
Nitab4.5_0005690g0020 Nicotiana tabacum HOM05D005167 ORTHO05D006312 8.7e-37 159.1 376 30.6
QL93p1868_0059 Quercus lobata HOM05D005167 ORTHO05D006312 1.5e-36 158.3 162 46.3
AUR62032503 Chenopodium quinoa HOM05D005167 ORTHO05D000001 2.1e-35 154.5 345 33.6
Eucgr.B01586 Eucalyptus grandis HOM05D005167 ORTHO05D006312 1.3e-32 145.2 389 31.9
CDE02G1408 Ceratophyllum demersum HOM05D005167 ORTHO05D006312 1.9e-31 141.4 134 55.2
QL07p001518 Quercus lobata HOM05D005167 ORTHO05D006312 1.9e-31 141.4 279 36.2
ECA234G3362 Erigeron canadensis HOM05D005167 ORTHO05D006312 3.5e-30 137.1 386 29.5
Nitab4.5_0001246g0010 Nicotiana tabacum HOM05D005167 ORTHO05D006312 3.5e-30 137.1 364 28.8
BcaC06g36613 Brassica carinata HOM05D005167 ORTHO05D006312 1.0e-29 135.6 289 30.1
Nitab4.5_0007926g0020 Nicotiana tabacum HOM05D005167 ORTHO05D006312 1.8e-29 134.8 364 28.6
C06p19120 Brassica napus HOM05D005167 ORTHO05D006312 3.0e-29 134.0 304 32.6
BolC6t37111H Brassica oleracea HOM05D005167 ORTHO05D006312 3.0e-29 134.0 304 32.6
QL01p053234 Quercus lobata HOM05D005167 ORTHO05D006312 5.1e-29 133.3 162 42.0
A07p01000 Brassica napus HOM05D005167 ORTHO05D006312 4.3e-28 130.2 150 47.3
Thhalv10028065m.g Eutrema salsugineum HOM05D005167 ORTHO05D006312 5.7e-28 129.8 147 46.9
QL93p1868_0064 Quercus lobata HOM05D005167 ORTHO05D006312 7.4e-28 129.4 150 47.3
QL01p052835 Quercus lobata HOM05D005167 ORTHO05D006312 9.7e-28 129.0 150 47.3
Gohir.D07G228750 Gossypium hirsutum HOM05D005167 ORTHO05D006312 8.2e-27 125.9 403 25.6
BcaC06g31947 Brassica carinata HOM05D005167 ORTHO05D006312 1.7e-24 118.2 293 28.3
Gorai.001G263800 Gossypium raimondii HOM05D005167 ORTHO05D006312 5.0e-24 116.7 403 26.3
Dinv42629 Davidia involucrata HOM05D005167 ORTHO05D006312 2.7e-22 110.9 70 72.9
HanXRQChr12g0378911 Helianthus annuus HOM05D005167 ORTHO05D006312 3.6e-22 110.5 154 35.7
SpUn0005_0090 Schrenkiella parvula HOM05D005167 ORTHO05D006312 6.3e-19 99.8 106 44.3
Aqoxy4G01501 Aquilegia oxysepala HOM05D005167 ORTHO05D006312 3.4e-17 94.0 161 37.3
Atru.chr9.63 Acer truncatum HOM05D005167 ORTHO05D006312 4.5e-17 93.6 108 43.5
Eucgr.B01611 Eucalyptus grandis HOM05D005167 ORTHO05D006312 3.8e-16 90.5 119 42.9
Gohir.A12G103850 Gossypium hirsutum HOM05D005167 ORTHO05D006312 6.7e-13 79.7 116 44.0
Rhsim04G0168400 Rhododendron simsii HOM05D000018 ORTHO05D008577 8.8e-13 79.3 79 57.0
PGSC0003DMG400040448 Solanum tuberosum HOM05D005167 ORTHO05D006312 8.8e-13 79.3 120 39.2
ECA232G3819 Erigeron canadensis HOM05D007651 ORTHO05D000898 8.2e-11 72.8 65 53.8
BcaC06g31946 Brassica carinata HOM05D005167 ORTHO05D006312 7.0e-10 69.7 100 34.0
COL.COLO4_16251 Corchorus olitorius HOM05D005167 ORTHO05D006312 7.2e-07 59.7 74 41.9


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