Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc01g102430.2 Solanum lycopersicum HOM05D008494 ORTHO05D010021 2.0e-55 218.8 104 100.0
Peaxi162Scf00194g00512 Petunia axillaris HOM05D008494 ORTHO05D010021 2.4e-37 158.7 98 76.5
Peaxi162Scf00071g00117 Petunia axillaris HOM05D008494 ORTHO05D010021 1.5e-26 122.9 89 65.2
Nitab4.5_0004090g0020 Nicotiana tabacum HOM05D008494 ORTHO05D010021 1.3e-25 119.8 84 71.4
Oeu033225.1 Olea europaea HOM05D008494 ORTHO05D010021 3.7e-25 118.2 99 55.6
Oeu000174.1 Olea europaea HOM05D008494 ORTHO05D010021 4.8e-25 117.9 94 59.6
DCAR_029308 Daucus carota HOM05D008494 ORTHO05D010021 1.6e-20 102.8 92 52.2
Migut.B00913 Erythranthe guttata HOM05D008494 ORTHO05D010021 4.6e-20 101.3 94 55.3
Rhsim11G0107000 Rhododendron simsii HOM05D000136 ORTHO05D000080 6.1e-20 100.9 94 51.1
QL03p011411 Quercus lobata HOM05D008494 ORTHO05D010021 3.9e-19 98.2 110 47.3
SGA_v2.0_scaffold311G48250 Striga asiatica HOM05D008494 ORTHO05D010021 6.7e-19 97.4 99 47.5
RcHm_v2.0_Chr3g0459041 Rosa chinensis HOM05D008494 ORTHO05D010021 3.7e-17 91.7 97 51.5
Haze_15004 Corylus avellana HOM05D008494 ORTHO05D010021 1.1e-16 90.1 107 45.8
Atru.chr12.1506 Acer truncatum HOM05D008494 ORTHO05D010021 1.4e-16 89.7 101 45.5
Hma1.2p1_0157F.1_g069490 Hydrangea macrophylla HOM05D008494 ORTHO05D010021 1.4e-16 89.7 67 59.7
Cfa004401 Carpinus fangiana HOM05D008494 ORTHO05D010021 1.8e-16 89.4 101 48.5
TPR.G1638 Trifolium pratense HOM05D008494 ORTHO05D010021 4.1e-16 88.2 92 47.8
Glyma.03G227000 Glycine max HOM05D008494 ORTHO05D010021 5.3e-16 87.8 89 50.6
FAN14G1748 Fragaria x ananassa HOM05D008494 ORTHO05D010021 9.0e-16 87.0 96 51.0
Prupe.6G302200 Prunus persica HOM05D008494 ORTHO05D010021 2.6e-15 85.5 105 48.6
Atru.chr12.1501 Acer truncatum HOM05D008494 ORTHO05D010021 4.5e-15 84.7 101 43.6
Manes.09G182700 Manihot esculenta HOM05D008494 ORTHO05D010021 4.5e-15 84.7 92 45.7
Lalb_Chr02g0147351 Lupinus albus HOM05D008494 ORTHO05D010021 1.3e-14 83.2 89 49.4
Manes.08G105911 Manihot esculenta HOM05D008494 ORTHO05D010021 1.3e-14 83.2 92 45.7
CiPaw.02G000600 Carya illinoinensis HOM05D008494 ORTHO05D010021 2.2e-14 82.4 107 44.9
Ciclev10030055m.g Citrus clementina HOM05D008494 ORTHO05D010021 3.8e-14 81.6 106 41.5
Glyma.19G223900 Glycine max HOM05D008494 ORTHO05D010021 3.8e-14 81.6 89 47.2
VMungo1383G1264 Vigna mungo HOM05D008494 ORTHO05D010021 5.0e-14 81.3 89 49.4
Medtr7g111200 Medicago truncatula HOM05D008494 ORTHO05D010021 1.9e-13 79.3 90 44.4
Potri.005G000800 Populus trichocarpa HOM05D008494 ORTHO05D010021 2.5e-13 79.0 117 39.3
Actinidia17727 Actinidia chinensis HOM05D008494 ORTHO05D010021 3.2e-13 78.6 61 57.4
MD04G1183700 Malus domestica HOM05D008494 ORTHO05D010021 5.5e-13 77.8 80 52.5
Potri.013G000100 Populus trichocarpa HOM05D008494 ORTHO05D010021 9.4e-13 77.0 100 44.0
Sc07g0001870 Simmondsia chinensis HOM05D008494 ORTHO05D010021 1.6e-12 76.3 96 43.8
Phvul.001G220800 Phaseolus vulgaris HOM05D008494 ORTHO05D010021 2.1e-12 75.9 74 54.1
Oeu025675.1 Olea europaea HOM05D008494 ORTHO05D010021 4.6e-12 74.7 78 47.4
Lalb_Chr04g0260271 Lupinus albus HOM05D008494 ORTHO05D010021 3.0e-11 72.0 100 43.0
Thecc.05G331500 Theobroma cacao HOM05D008494 ORTHO05D010021 5.1e-11 71.2 89 44.9
Lalb_Chr21g0309951 Lupinus albus HOM05D008494 ORTHO05D010021 1.1e-10 70.1 65 46.2
Dinv30960 Davidia involucrata HOM05D008494 ORTHO05D010021 2.5e-10 68.9 75 53.3
Lj1g0018830 Lotus japonicus HOM05D008494 ORTHO05D010021 2.5e-10 68.9 88 45.5
DCAR_003254 Daucus carota HOM05D008494 ORTHO05D010021 1.3e-09 66.6 101 33.7
ECA234G2754 Erigeron canadensis HOM05D008494 ORTHO05D010021 1.3e-09 66.6 96 37.5
arahy.Tifrunner.gnm1.ann1.J2KNI4 Arachis hypogaea HOM05D008494 ORTHO05D010021 4.8e-09 64.7 94 39.4
CsaV3_2G007440 Cucumis sativus L. HOM05D008494 ORTHO05D010021 8.2e-09 63.9 90 43.3
Ah.02g121360 Amaranthus hybridus HOM05D008494 ORTHO05D010021 1.4e-08 63.2 78 42.3
Sed0011896 Sechium edule HOM05D008494 ORTHO05D010021 1.8e-08 62.8 93 45.2
CARHR186970 Cardamine hirsuta HOM05D003663 ORTHO05D010021 6.9e-08 60.8 88 38.6
Nn4g25250 Nelumbo nucifera HOM05D008494 ORTHO05D010021 9.1e-08 60.5 93 39.8
EL10Ac6g15323 Beta vulgaris HOM05D008494 ORTHO05D010021 2.0e-07 59.3 64 45.3
Carub.0006s2421 Capsella rubella HOM05D003663 ORTHO05D010021 2.6e-07 58.9 94 34.0
THA.LOC104803108 Tarenaya hassleriana HOM05D003663 ORTHO05D010021 3.4e-07 58.5 84 38.1


User provided reference genes

Program Settings