Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc01g102420.1 Solanum lycopersicum HOM05D008878 ORTHO05D010972 2.6e-53 211.8 109 100.0
Sopen01g044870 Solanum pennellii HOM05D008878 ORTHO05D010972 5.0e-49 197.6 102 98.0
PGSC0003DMG400018274 Solanum tuberosum HOM05D008878 ORTHO05D010972 4.2e-48 194.5 102 95.1
Nitab4.5_0006193g0030 Nicotiana tabacum HOM05D008878 ORTHO05D010972 2.7e-34 148.7 105 79.0
Nitab4.5_0004090g0010 Nicotiana tabacum HOM05D008878 ORTHO05D010972 6.5e-33 144.1 106 79.2
Nitab4.5_0000081g0040 Nicotiana tabacum HOM05D008878 ORTHO05D010972 3.6e-23 111.7 107 62.6
Nitab4.5_0010076g0010 Nicotiana tabacum HOM05D008878 ORTHO05D010972 1.0e-22 110.2 107 61.7
Peaxi162Scf00035g00092 Petunia axillaris HOM05D008878 ORTHO05D010972 9.2e-19 97.1 100 60.0
Oeu033223.1 Olea europaea HOM05D008878 ORTHO05D010972 2.0e-18 95.9 103 52.4
Migut.B00909 Erythranthe guttata HOM05D008878 ORTHO05D010972 9.5e-16 87.0 109 48.6
QL03p011407 Quercus lobata HOM05D008878 ORTHO05D010972 4.7e-15 84.7 108 50.9
Cfa004402 Carpinus fangiana HOM05D008878 ORTHO05D010972 6.1e-15 84.3 104 51.0
Eucgr.H01348 Eucalyptus grandis HOM05D008878 ORTHO05D010972 2.3e-14 82.4 109 45.9
Phvul.007G206900 Phaseolus vulgaris HOM05D008878 ORTHO05D010972 5.2e-14 81.3 104 47.1
Hma1.2p1_0052F.1_g030230 Hydrangea macrophylla HOM05D008878 ORTHO05D010972 1.2e-13 80.1 109 44.0
Glyma.20G089900 Glycine max HOM05D008878 ORTHO05D010972 1.5e-13 79.7 104 47.1
Lsat_1_v5_gn_5_146741 Lactuca sativa HOM05D008878 ORTHO05D010972 3.4e-13 78.6 112 43.8
Glyma.10G141300 Glycine max HOM05D008878 ORTHO05D010972 1.3e-12 76.6 104 45.2
Lalb_Chr02g0147361 Lupinus albus HOM05D008878 ORTHO05D010972 4.1e-11 71.6 107 43.0
DCAR_022332 Daucus carota HOM05D008878 ORTHO05D010972 5.4e-11 71.2 99 48.5
Manes.08G105922 Manihot esculenta HOM05D008878 ORTHO05D010972 6.0e-10 67.8 120 46.7
Prupe.6G302300 Prunus persica HOM05D008878 ORTHO05D010972 6.0e-10 67.8 99 47.5
Rhsim11G0107100 Rhododendron simsii HOM05D008878 ORTHO05D010972 6.0e-10 67.8 114 43.0
Lj5g0023056 Lotus japonicus HOM05D008878 ORTHO05D010972 1.3e-09 66.6 107 45.8
SalBow4G0823 Salvia bowleyana HOM05D008878 ORTHO05D010972 3.0e-09 65.5 83 50.6
SalBow4G1628 Salvia bowleyana HOM05D008878 ORTHO05D010972 3.0e-09 65.5 83 50.6
Lsat_1_v5_gn_9_83921 Lactuca sativa HOM05D008878 ORTHO05D010972 1.9e-08 62.8 109 35.8
Actinidia11704 Actinidia chinensis HOM05D008878 ORTHO05D010972 2.5e-08 62.4 105 39.0
TPR.G3072 Trifolium pratense HOM05D008878 ORTHO05D010972 4.3e-08 61.6 104 42.3
FAN09G4214 Fragaria x ananassa HOM05D008878 ORTHO05D010972 4.7e-07 58.2 96 47.9
Psat6g156760 Pisum sativum HOM05D008878 ORTHO05D010972 4.7e-07 58.2 104 42.3
Medtr1g085190 Medicago truncatula HOM05D008878 ORTHO05D010972 6.2e-07 57.8 104 41.3
Potri.005G001001 Populus trichocarpa HOM05D008878 ORTHO05D010972 1.1e-06 57.0 96 41.7
FAN05G5213 Fragaria x ananassa HOM05D008878 ORTHO05D010972 1.4e-06 56.6 96 46.9
FAN05G4981 Fragaria x ananassa HOM05D008878 ORTHO05D010972 1.8e-06 56.2 93 48.4
FAN02G1425 Fragaria x ananassa HOM05D008878 ORTHO05D010972 5.2e-06 54.7 93 48.4


User provided reference genes

Program Settings