Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc01g101110.3 Solanum lycopersicum HOM05D006221 ORTHO05D007759 0.0e+00 1242.6 622 100.0
Sopen01g044560 Solanum pennellii HOM05D006221 ORTHO05D007759 0.0e+00 1216.8 623 98.4
PGSC0003DMG400018290 Solanum tuberosum HOM05D006221 ORTHO05D007759 8.2e-306 1053.1 610 88.4
CAN.G1248.26 Capsicum annuum HOM05D006221 ORTHO05D007759 5.3e-297 1023.8 649 81.5
Nitab4.5_0014566g0010 Nicotiana tabacum HOM05D006221 ORTHO05D007759 1.3e-279 966.1 608 82.2
Peaxi162Scf00357g00116 Petunia axillaris HOM05D006221 ORTHO05D007759 8.6e-271 936.8 624 77.4
Nitab4.5_0001931g0080 Nicotiana tabacum HOM05D006221 ORTHO05D007759 1.2e-261 906.4 543 84.5
Dinv30939 Davidia involucrata HOM05D006221 ORTHO05D007759 3.4e-235 818.5 614 67.4
Actinidia11678 Actinidia chinensis HOM05D006221 ORTHO05D007759 4.5e-227 791.6 625 65.4
Migut.B00875 Erythranthe guttata HOM05D006221 ORTHO05D007759 1.3e-226 790.0 628 66.9
Oeu016545.1 Olea europaea HOM05D006221 ORTHO05D007759 2.2e-226 789.3 622 66.2
Hma1.2p1_0052F.1_g030430 Hydrangea macrophylla HOM05D006221 ORTHO05D007759 2.9e-226 788.9 622 65.3
MSTRG.16421 Avicennia marina HOM05D006221 ORTHO05D007759 1.2e-224 783.5 625 65.1
Lju99A6T47 Lonicera japonica HOM05D006221 ORTHO05D007759 2.1e-221 772.7 625 64.2
GSVIVG01031316001 Vitis vinifera HOM05D006221 ORTHO05D007759 3.6e-221 771.9 617 63.7
Cc02_g35760 Coffea canephora HOM05D006221 ORTHO05D007759 1.4e-217 760.0 647 62.3
SalBow5G5479 Salvia bowleyana HOM05D006221 ORTHO05D007759 2.5e-214 749.2 662 60.6
vmacro01605 Vaccinium macrocarpon HOM05D006221 ORTHO05D007759 3.7e-213 745.3 666 60.2
SGA_v2.0_scaffold671G53422 Striga asiatica HOM05D006221 ORTHO05D007759 4.8e-213 745.0 671 61.0
Manes.09G180400 Manihot esculenta HOM05D006221 ORTHO05D007759 3.8e-210 735.3 618 61.8
Rhsim11G0101500 Rhododendron simsii HOM05D006221 ORTHO05D007759 2.1e-208 729.6 740 54.9
QL03p010449 Quercus lobata HOM05D006221 ORTHO05D007759 7.9e-208 727.6 617 61.1
Atru.chr12.1555 Acer truncatum HOM05D006221 ORTHO05D007759 2.9e-202 709.1 621 59.3
Haze_03998 Corylus avellana HOM05D006221 ORTHO05D007759 1.2e-200 703.7 668 57.5
CiPaw.07G035200 Carya illinoinensis HOM05D006221 ORTHO05D007759 4.1e-196 688.7 553 62.7
TWI38G0202 Tripterygium wilfordii HOM05D006221 ORTHO05D007759 3.4e-195 685.6 619 59.5
Eucgr.B01816 Eucalyptus grandis HOM05D006221 ORTHO05D007759 4.5e-195 685.3 620 57.7
Ca_09279_v3 Cicer arietinum L. HOM05D006221 ORTHO05D007759 1.7e-194 683.3 631 57.4
CsaV3_1G038010 Cucumis sativus L. HOM05D006221 ORTHO05D007759 1.7e-194 683.3 620 59.2
PGR083G2161 Punica granatum HOM05D006221 ORTHO05D007759 2.2e-194 682.9 618 58.3
Ciclev10011303m.g Citrus clementina HOM05D006221 ORTHO05D007759 1.9e-193 679.9 634 58.0
Sabra05G0000700 Salix brachista HOM05D006221 ORTHO05D007759 5.5e-193 678.3 625 57.9
Sabra05G0014800 Salix brachista HOM05D006221 ORTHO05D007759 1.6e-192 676.8 625 57.8
Lalb_Chr18g0046191 Lupinus albus HOM05D006221 ORTHO05D007759 2.1e-192 676.4 628 58.1
Potri.005G003400 Populus trichocarpa HOM05D006221 ORTHO05D007759 2.7e-192 676.0 555 62.7
DCAR_005251 Daucus carota HOM05D006221 ORTHO05D007759 3.9e-191 672.2 621 57.8
Lj1g0008157 Lotus japonicus HOM05D006221 ORTHO05D007759 1.1e-190 670.6 622 57.9
Gohir.A13G113400 Gossypium hirsutum HOM05D006221 ORTHO05D007759 5.7e-190 668.3 618 58.3
Glyma.19G226000 Glycine max HOM05D006221 ORTHO05D007759 3.7e-189 665.6 617 57.9
Sc16g0009350 Simmondsia chinensis HOM05D006221 ORTHO05D007759 6.3e-189 664.8 625 56.6
Thecc.05G328800 Theobroma cacao HOM05D006221 ORTHO05D007759 6.3e-189 664.8 623 57.0
TPR.G1625 Trifolium pratense HOM05D006221 ORTHO05D007759 1.8e-188 663.3 621 56.7
Gorai.013G131100 Gossypium raimondii HOM05D006221 ORTHO05D007759 4.1e-188 662.1 628 57.8
Nn3g21902 Nelumbo nucifera HOM05D006221 ORTHO05D007759 4.1e-188 662.1 619 58.2
Gohir.D13G116600 Gossypium hirsutum HOM05D006221 ORTHO05D007759 6.9e-188 661.4 618 58.1
Duzib177G0418 Durio zibethinus HOM05D006221 ORTHO05D007759 3.4e-187 659.1 617 57.1
VMungo1383G1939 Vigna mungo HOM05D006221 ORTHO05D007759 1.0e-186 657.5 623 57.8
CANSAT54G2840 Cannabis sativa HOM05D006221 ORTHO05D007759 1.3e-186 657.1 621 56.8
Sed0012716 Sechium edule HOM05D006221 ORTHO05D007759 1.3e-186 657.1 621 57.3
Medtr7g111610 Medicago truncatula HOM05D006221 ORTHO05D007759 2.9e-186 656.0 629 54.5
ClCG03G017850 Citrullus lanatus HOM05D006221 ORTHO05D007759 8.5e-186 654.4 621 57.5
THA.LOC104816844 Tarenaya hassleriana HOM05D006221 ORTHO05D007759 1.9e-185 653.3 621 57.5
PSO210G0944 Papaver somniferum HOM05D006221 ORTHO05D007759 2.3e-183 646.4 623 56.3
Psat3g014840 Pisum sativum HOM05D006221 ORTHO05D007759 1.1e-182 644.0 564 59.0
arahy.Tifrunner.gnm1.ann1.CKL802 Arachis hypogaea HOM05D006221 ORTHO05D007759 1.5e-182 643.7 622 56.3
Aqoxy2G02530 Aquilegia oxysepala HOM05D006221 ORTHO05D007759 4.4e-182 642.1 568 59.9
Phvul.001G222600 Phaseolus vulgaris HOM05D006221 ORTHO05D007759 4.4e-182 642.1 623 56.5
PSO761G0564 Papaver somniferum HOM05D006221 ORTHO05D007759 7.4e-182 641.3 623 56.2
Prupe.6G305800 Prunus persica HOM05D006221 ORTHO05D007759 9.7e-182 641.0 598 58.2
CARHR009420 Cardamine hirsuta HOM05D006221 ORTHO05D007759 2.0e-179 633.3 616 56.0
HanXRQChr14g0449401 Helianthus annuus HOM05D006221 ORTHO05D007759 2.0e-179 633.3 616 57.3
AUR62006807 Chenopodium quinoa HOM05D006221 ORTHO05D007759 7.7e-179 631.3 628 55.7
AT1G09450 Arabidopsis thaliana HOM05D006221 ORTHO05D007759 1.0e-178 630.9 624 55.0
ECA236G2609 Erigeron canadensis HOM05D006221 ORTHO05D007759 1.0e-178 630.9 618 56.3
RcHm_v2.0_Chr3g0458361 Rosa chinensis HOM05D006221 ORTHO05D007759 4.2e-177 625.5 593 57.8
AUR62000466 Chenopodium quinoa HOM05D006221 ORTHO05D007759 7.2e-177 624.8 628 55.9
Carub.0001s0880 Capsella rubella HOM05D006221 ORTHO05D007759 4.7e-176 622.1 621 54.9
MD04G1187300 Malus domestica HOM05D006221 ORTHO05D007759 1.8e-175 620.2 603 56.6
MBI19_g32730_MAGBIO Magnolia biondii HOM05D006221 ORTHO05D007759 5.2e-175 618.6 645 54.3
Thhalv10007117m.g Eutrema salsugineum HOM05D006221 ORTHO05D007759 1.2e-174 617.5 619 55.6
FvH4_6g08390 Fragaria vesca HOM05D006221 ORTHO05D007759 2.0e-174 616.7 594 56.7
Lsat_1_v5_gn_9_77141 Lactuca sativa HOM05D006221 ORTHO05D007759 2.0e-174 616.7 617 54.6
AL1G19970 Arabidopsis lyrata HOM05D006221 ORTHO05D007759 3.3e-174 615.9 621 54.8
Sp1g08060 Schrenkiella parvula HOM05D006221 ORTHO05D007759 4.4e-174 615.5 622 54.8
arahy.Tifrunner.gnm1.ann1.7121P0 Arachis hypogaea HOM05D006221 ORTHO05D007759 9.7e-174 614.4 629 53.6
FAN05G2605 Fragaria x ananassa HOM05D006221 ORTHO05D007759 1.7e-173 613.6 590 56.8
Hma1.2p1_0052F.1_g030440 Hydrangea macrophylla HOM05D006221 ORTHO05D007759 3.7e-173 612.5 563 58.3
Aa31LG1G5650 Aethionema arabicum HOM05D006221 ORTHO05D007759 5.3e-172 608.6 647 52.4
Hund07275 Selenicereus undatus HOM05D006221 ORTHO05D007759 1.2e-171 607.4 623 55.5
A08p34550 Brassica napus HOM05D006221 ORTHO05D007759 1.0e-170 604.4 627 53.3
BraA08t35366Z Brassica rapa HOM05D006221 ORTHO05D007759 1.0e-170 604.4 624 53.8
BcaB03g13298 Brassica carinata HOM05D006221 ORTHO05D007759 3.2e-169 599.4 623 53.3
FAN02G1566 Fragaria x ananassa HOM05D006221 ORTHO05D007759 9.4e-169 597.8 574 56.6
C08p12920 Brassica napus HOM05D006221 ORTHO05D007759 3.0e-167 592.8 624 53.2
Hund07280 Selenicereus undatus HOM05D006221 ORTHO05D007759 3.0e-167 592.8 546 58.6
EL10Ac4g09547 Beta vulgaris HOM05D006221 ORTHO05D007759 3.4e-166 589.3 622 53.1
BolC8t48922H Brassica oleracea HOM05D006221 ORTHO05D007759 1.4e-164 583.9 636 52.2
BcaC07g38511 Brassica carinata HOM05D006221 ORTHO05D007759 3.2e-161 572.8 613 52.5
Dinv30938 Davidia involucrata HOM05D006221 ORTHO05D007759 5.7e-158 562.0 416 68.0
unitig_699.g19069 Utricularia gibba HOM05D006221 ORTHO05D007759 5.4e-156 555.4 588 54.3
PSO017G3773 Papaver somniferum HOM05D006221 ORTHO05D007759 1.9e-145 520.4 529 53.7
Zm00001eb109970 Zea mays HOM05D006221 ORTHO05D007759 2.7e-139 500.0 635 46.6
Potri.013G003600 Populus trichocarpa HOM05D006221 ORTHO05D007759 1.9e-137 493.8 386 63.7
HPP92_001185 Vanilla planifolia HOM05D006221 ORTHO05D007759 1.2e-136 491.1 668 45.5
SHI18018 Sapria himalayana HOM05D006221 ORTHO05D007759 6.8e-127 458.8 516 51.2
ATR0796G167 Amborella trichopoda HOM05D006221 ORTHO05D007759 3.9e-122 443.0 622 44.4
TAR633G1110 Trochodendron aralioides HOM05D003727 ORTHO05D004731 2.7e-115 420.2 462 50.9
MELO3C015244.2 Cucumis melo HOM05D006221 ORTHO05D007759 1.1e-113 414.8 366 60.1
Ah.10g026960 Amaranthus hybridus HOM05D006221 ORTHO05D007759 1.1e-108 398.3 436 51.4
SEGI_23402 Sequoiadendron giganteum HOM05D006221 ORTHO05D007759 1.1e-108 398.3 336 58.6
AagrBONN_evm.TU.Sc2ySwM_228.2896 Anthoceros agrestis HOM05D006221 ORTHO05D007759 8.7e-106 388.7 363 53.7
Pp3c5_21110 Physcomitrium patens HOM05D006221 ORTHO05D007759 4.2e-100 369.8 336 56.2
Mapoly0101s0065 Marchantia polymorpha HOM05D006221 ORTHO05D007759 1.3e-98 364.8 372 52.4
CDE08G0155 Ceratophyllum demersum HOM05D006221 ORTHO05D007759 2.1e-91 340.9 579 37.8
FAN09G0827 Fragaria x ananassa HOM05D006221 ORTHO05D007759 2.3e-90 337.4 497 44.9
CBR_g46893 Chara braunii HOM05D006221 ORTHO05D007759 2.2e-88 330.9 380 47.1
COL.COLO4_05510 Corchorus olitorius HOM05D006221 ORTHO05D007759 3.0e-66 257.3 628 33.1
SMO169G0298 Selaginella moellendorffii HOM05D006221 ORTHO05D007759 1.3e-64 251.9 225 55.1
Cpa.g.sc48.218 Carica papaya HOM05D006221 ORTHO05D007759 1.6e-62 245.0 544 33.3
Cre02.g108000 Chlamydomonas reinhardtii HOM05D006221 ORTHO05D007759 1.7e-53 214.9 349 37.2
Glyma.03G228700 Glycine max HOM05D006221 ORTHO05D007759 4.0e-50 203.8 144 67.4
Actinidia16908 Actinidia chinensis HOM05D006221 ORTHO05D007759 6.8e-42 176.4 166 57.8
MCO05G201 Micromonas commoda HOM05D006221 ORTHO05D007759 2.4e-39 167.9 168 53.6
Lj9A230T20 Lonicera japonica HOM05D006221 ORTHO05D007759 5.9e-38 163.3 175 50.9
PRCOL_00002024 Prasinoderma coloniale HOM05D006221 ORTHO05D007759 2.0e-30 138.3 190 40.5
Nn5g27477 Nelumbo nucifera HOM05D001388 ORTHO05D001234 5.2e-26 123.6 103 56.3
PRCOL_00002025 Prasinoderma coloniale HOM05D006221 ORTHO05D007759 2.2e-16 91.7 173 35.3
C09p35620 Brassica napus HOM05D006221 ORTHO05D007759 4.1e-15 87.4 66 57.6
BolC9t56398H Brassica oleracea HOM05D006221 ORTHO05D007759 4.1e-15 87.4 66 57.6
FvH4_1g12820 Fragaria vesca HOM05D006221 ORTHO05D007759 3.3e-12 77.8 97 51.5
Actinidia26529 Actinidia chinensis HOM05D006221 ORTHO05D007759 8.9e-10 69.7 37 70.3
Cfa023263 Carpinus fangiana HOM05D006221 ORTHO05D007759 2.0e-09 68.6 363 21.2
PSO170G3396 Papaver somniferum HOM05D000502 ORTHO05D000356 7.8e-06 56.6 105 37.1


User provided reference genes

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