Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc01g100260.4 Solanum lycopersicum HOM05D007729 ORTHO05D009724 0.0e+00 1100.9 564 100.0
Sopen01g043770 Solanum pennellii HOM05D007729 ORTHO05D009724 0.0e+00 1076.6 564 97.5
PGSC0003DMG400024735 Solanum tuberosum HOM05D007729 ORTHO05D009724 1.1e-304 1049.3 564 95.0
Nitab4.5_0006072g0050 Nicotiana tabacum HOM05D007729 ORTHO05D009724 2.7e-263 911.8 587 81.4
Nitab4.5_0000368g0330 Nicotiana tabacum HOM05D007729 ORTHO05D009724 7.3e-261 903.7 563 83.3
CAN.G1273.5 Capsicum annuum HOM05D007729 ORTHO05D009724 6.8e-259 897.1 564 83.2
Peaxi162Scf00673g00025 Petunia axillaris HOM05D007729 ORTHO05D009724 1.4e-240 836.3 552 78.4
Dinv24421 Davidia involucrata HOM05D007729 ORTHO05D009724 7.5e-173 611.3 537 60.9
Migut.B00991 Erythranthe guttata HOM05D007729 ORTHO05D009724 2.9e-169 599.4 567 57.7
Hma1.2p1_1320F.1_g275420 Hydrangea macrophylla HOM05D007729 ORTHO05D009724 7.2e-168 594.7 502 62.4
HanXRQChr09g0268291 Helianthus annuus HOM05D007729 ORTHO05D009724 2.8e-167 592.8 564 57.1
Oeu053698.1 Olea europaea HOM05D007729 ORTHO05D009724 1.5e-165 587.0 504 60.7
Lsat_1_v5_gn_7_73440 Lactuca sativa HOM05D007729 ORTHO05D009724 3.4e-165 585.9 537 58.5
Actinidia16844 Actinidia chinensis HOM05D007729 ORTHO05D009724 3.7e-164 582.4 570 56.5
Lj9A208G24 Lonicera japonica HOM05D007729 ORTHO05D009724 4.9e-164 582.0 529 59.2
MSTRG.20396 Avicennia marina HOM05D007729 ORTHO05D009724 1.4e-163 580.5 567 55.7
SalBow7G3736 Salvia bowleyana HOM05D007729 ORTHO05D009724 1.2e-157 560.8 551 54.6
Cc02_g34750 Coffea canephora HOM05D007729 ORTHO05D009724 1.3e-156 557.4 546 57.0
TAR365G0479 Trochodendron aralioides HOM05D007729 ORTHO05D009724 3.2e-155 552.7 548 56.2
ECA236G3528 Erigeron canadensis HOM05D007729 ORTHO05D009724 1.0e-153 547.7 531 56.3
CSS0040240 Camellia sinensis var. sinensis HOM05D007729 ORTHO05D009724 3.0e-153 546.2 603 52.6
Ciclev10000704m.g Citrus clementina HOM05D007729 ORTHO05D009724 1.8e-150 537.0 551 51.2
SGA_v2.0_scaffold53G19323 Striga asiatica HOM05D007729 ORTHO05D009724 9.8e-149 531.2 491 58.0
GSVIVG01031211001 Vitis vinifera HOM05D007729 ORTHO05D009724 9.8e-149 531.2 560 52.7
Cpa.g.sc48.137 Carica papaya HOM05D007729 ORTHO05D009724 8.3e-148 528.1 544 52.6
Nn4g25665 Nelumbo nucifera HOM05D007729 ORTHO05D009724 1.9e-147 526.9 561 52.9
Potri.005G020100 Populus trichocarpa HOM05D007729 ORTHO05D009724 2.1e-146 523.5 549 52.8
DCAR_021068 Daucus carota HOM05D007729 ORTHO05D009724 7.8e-146 521.5 546 52.6
DCAR_021070 Daucus carota HOM05D007729 ORTHO05D009724 7.8e-146 521.5 546 52.6
QL03p018088 Quercus lobata HOM05D007729 ORTHO05D009724 2.3e-145 520.0 554 53.1
RcHm_v2.0_Chr3g0456781 Rosa chinensis HOM05D007729 ORTHO05D009724 1.9e-144 516.9 553 51.5
Atru.chr2.143 Acer truncatum HOM05D007729 ORTHO05D009724 3.3e-144 516.2 562 50.7
FAN05G4184 Fragaria x ananassa HOM05D007729 ORTHO05D009724 4.7e-143 512.3 560 51.2
FAN14G4369 Fragaria x ananassa HOM05D007729 ORTHO05D009724 6.2e-143 511.9 568 51.2
PSO761G0658 Papaver somniferum HOM05D007729 ORTHO05D009724 1.1e-142 511.1 559 53.0
Duzib177G0448 Durio zibethinus HOM05D007729 ORTHO05D009724 1.8e-142 510.4 580 50.5
Sabra05G0026100 Salix brachista HOM05D005361 ORTHO05D006518 1.8e-142 510.4 538 51.7
FvH4_6g07160 Fragaria vesca HOM05D007729 ORTHO05D009724 5.2e-142 508.8 511 54.2
PSO210G3025 Papaver somniferum HOM05D007729 ORTHO05D009724 4.1e-139 499.2 558 52.0
FAN09G4655 Fragaria x ananassa HOM05D007729 ORTHO05D009724 2.7e-138 496.5 555 51.0
Manes.09G175100 Manihot esculenta HOM05D007729 ORTHO05D009724 3.5e-138 496.1 542 51.1
Gohir.D13G114300 Gossypium hirsutum HOM05D007729 ORTHO05D009724 1.7e-137 493.8 547 50.6
Gohir.A13G111500 Gossypium hirsutum HOM05D007729 ORTHO05D009724 1.5e-136 490.7 547 50.6
Gorai.013G128200 Gossypium raimondii HOM05D007729 ORTHO05D009724 1.9e-136 490.3 547 50.6
MBI18_g24956_MAGBIO Magnolia biondii HOM05D007729 ORTHO05D009724 4.7e-135 485.7 566 49.5
vmacro01545 Vaccinium macrocarpon HOM05D007729 ORTHO05D009724 8.1e-135 485.0 507 53.8
Thecc.05G320400 Theobroma cacao HOM05D007729 ORTHO05D009724 4.0e-134 482.6 551 48.5
TWI56G1038 Tripterygium wilfordii HOM05D007729 ORTHO05D009724 2.0e-133 480.3 481 54.9
THA.LOC104805912 Tarenaya hassleriana HOM05D007729 ORTHO05D009724 3.4e-133 479.6 555 48.3
A08p34750 Brassica napus HOM05D007729 ORTHO05D009724 5.8e-133 478.8 536 50.0
C08p12530 Brassica napus HOM05D007729 ORTHO05D009724 1.3e-132 477.6 550 49.1
BraA08t35386Z Brassica rapa HOM05D007729 ORTHO05D009724 1.7e-132 477.2 542 49.4
CANSAT54G0579 Cannabis sativa HOM05D007729 ORTHO05D009724 6.4e-132 475.3 571 48.7
BolC8t48891H Brassica oleracea HOM05D007729 ORTHO05D009724 8.4e-132 474.9 544 49.4
Sp1g07780 Schrenkiella parvula HOM05D007729 ORTHO05D009724 7.1e-131 471.9 555 47.9
Carub.0001s0852 Capsella rubella HOM05D007729 ORTHO05D009724 4.6e-130 469.2 572 48.3
AL1G19670 Arabidopsis lyrata HOM05D007729 ORTHO05D009724 1.0e-129 468.0 556 48.4
COL.COLO4_04132 Corchorus olitorius HOM05D007729 ORTHO05D009724 1.7e-129 467.2 540 48.7
Thhalv10007209m.g Eutrema salsugineum HOM05D007729 ORTHO05D009724 6.6e-129 465.3 580 46.6
EL10Ac4g09861 Beta vulgaris HOM05D007729 ORTHO05D009724 3.3e-128 463.0 538 48.9
Lalb_Chr02g0147931 Lupinus albus HOM05D007729 ORTHO05D009724 3.1e-126 456.4 547 49.4
AT1G09195 Arabidopsis thaliana HOM05D007729 ORTHO05D009724 1.5e-125 454.1 514 50.2
PGR031G2787 Punica granatum HOM05D007729 ORTHO05D009724 2.9e-124 449.9 551 47.9
Haze_04087 Corylus avellana HOM05D007729 ORTHO05D009724 1.2e-122 444.5 515 50.9
Aa31LG1G6090 Aethionema arabicum HOM05D007729 ORTHO05D009724 3.5e-122 443.0 512 48.6
CDE12G0453 Ceratophyllum demersum HOM05D007729 ORTHO05D009724 2.0e-117 427.2 500 49.4
BcaC07g38483 Brassica carinata HOM05D007729 ORTHO05D009724 2.3e-113 413.7 541 46.0
AUR62000694 Chenopodium quinoa HOM05D007729 ORTHO05D009724 3.0e-113 413.3 547 45.0
Prupe.6G315600 Prunus persica HOM05D007729 ORTHO05D009724 7.9e-106 388.7 401 54.4
AUR62005264 Chenopodium quinoa HOM05D007729 ORTHO05D009724 1.8e-105 387.5 550 42.9
ATR0706G084 Amborella trichopoda HOM05D007729 ORTHO05D009724 3.0e-105 386.7 576 40.8
SEGI_22290 Sequoiadendron giganteum HOM05D007729 ORTHO05D009724 1.9e-99 367.5 558 40.1
Aqoxy2G02816 Aquilegia oxysepala HOM05D007729 ORTHO05D009724 7.4e-96 355.5 359 53.5
Pp3c6_24770 Physcomitrium patens HOM05D007729 ORTHO05D009724 6.9e-94 349.0 566 39.6
Pp3c5_5230 Physcomitrium patens HOM05D007729 ORTHO05D009724 1.0e-92 345.1 559 38.3
vmacro05864 Vaccinium macrocarpon HOM05D007729 ORTHO05D009724 7.9e-90 335.5 375 52.8
CARHR009150 Cardamine hirsuta HOM05D007729 ORTHO05D009724 8.8e-89 332.0 369 51.8
Atru.chr2.136 Acer truncatum HOM05D007729 ORTHO05D009724 2.2e-84 317.4 302 56.3
Pp3c27_4900 Physcomitrium patens HOM05D007729 ORTHO05D009724 2.5e-83 313.9 557 37.0
Hund21744 Selenicereus undatus HOM05D007729 ORTHO05D009724 4.7e-82 309.7 527 38.7
Sc16g0008910 Simmondsia chinensis HOM05D007729 ORTHO05D009724 1.1e-80 305.1 378 47.6
Duzib147G0321 Durio zibethinus HOM05D007729 ORTHO05D009724 3.8e-76 290.0 367 47.4
vmacro20072 Vaccinium macrocarpon HOM05D007729 ORTHO05D009724 9.4e-75 285.4 374 47.9
PRCOL_00006313 Prasinoderma coloniale HOM05D007729 ORTHO05D009724 4.0e-65 253.4 587 32.7
Haze_25193 Corylus avellana HOM05D007729 ORTHO05D009724 5.8e-40 169.9 189 50.3
Aqoxy2G02815 Aquilegia oxysepala HOM05D007729 ORTHO05D009724 7.0e-38 162.9 166 53.0
CARHR009140 Cardamine hirsuta HOM05D007729 ORTHO05D009724 4.0e-33 147.1 192 44.3
Haze_15474 Corylus avellana HOM05D000683 ORTHO05D000507 5.6e-27 126.7 122 52.5
PGSC0003DMG400033855 Solanum tuberosum HOM05D007729 ORTHO05D009724 9.5e-27 125.9 69 87.0
MD12G1208200 Malus domestica HOM05D007729 ORTHO05D009724 1.4e-22 112.1 119 49.6
Haze_25604 Corylus avellana HOM05D007729 ORTHO05D009724 9.6e-19 99.4 122 47.5
CBR_g1071 Chara braunii HOM05D036030 ORTHO05D009724 7.1e-06 56.6 173 28.3


User provided reference genes

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