Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc01g100070.3 Solanum lycopersicum HOM05D010455 ORTHO05D010927 1.0e-145 520.0 259 100.0
Sopen01g043600 Solanum pennellii HOM05D010455 ORTHO05D010927 1.2e-136 490.0 262 95.0
PGSC0003DMG400024774 Solanum tuberosum HOM05D010455 ORTHO05D010927 9.2e-126 453.8 270 89.3
Nitab4.5_0001971g0050 Nicotiana tabacum HOM05D010455 ORTHO05D010927 2.1e-82 309.7 276 67.4
Nitab4.5_0002612g0010 Nicotiana tabacum HOM05D010455 ORTHO05D010927 4.0e-81 305.4 276 66.3
Peaxi162Scf00037g00185 Petunia axillaris HOM05D010455 ORTHO05D010927 1.5e-67 260.4 280 59.6
Dinv24410 Davidia involucrata HOM05D010455 ORTHO05D010927 1.1e-17 94.7 263 33.8
Manes.09G174200 Manihot esculenta HOM05D010455 ORTHO05D010927 6.1e-13 79.0 266 33.5
Nitab4.5_0000322g0150 Nicotiana tabacum HOM05D010455 ORTHO05D010927 1.8e-12 77.4 66 63.6
ECA236G1914 Erigeron canadensis HOM05D000101 ORTHO05D000089 1.5e-11 74.3 59 57.6
QL03p018916 Quercus lobata HOM05D015247 ORTHO05D010927 4.9e-10 69.3 68 54.4
Rhsim05G0136000 Rhododendron simsii HOM05D010455 ORTHO05D010927 4.9e-10 69.3 184 32.1
unitig_42.g32309 Utricularia gibba HOM05D010455 ORTHO05D010927 4.9e-10 69.3 44 72.7
unitig_899.g14744 Utricularia gibba HOM05D010455 ORTHO05D010927 4.9e-10 69.3 44 72.7
Actinidia19768 Actinidia chinensis HOM05D010455 ORTHO05D010927 6.3e-10 68.9 56 58.9
Lalb_Chr02g0148001 Lupinus albus HOM05D014479 ORTHO05D010927 1.4e-09 67.8 66 50.0
Cpa.g.sc48.126 Carica papaya HOM05D010455 ORTHO05D010927 1.8e-09 67.4 64 57.8
CSS0003559 Camellia sinensis var. sinensis HOM05D010455 ORTHO05D010927 3.2e-09 66.6 34 82.4
CSS0040289 Camellia sinensis var. sinensis HOM05D010455 ORTHO05D010927 3.2e-09 66.6 34 82.4
Migut.B01004 Erythranthe guttata HOM05D010455 ORTHO05D010927 3.2e-09 66.6 120 41.7
Sabra05G0027500 Salix brachista HOM05D015247 ORTHO05D010927 3.2e-09 66.6 68 51.5
Potri.005G021500 Populus trichocarpa HOM05D015247 ORTHO05D010927 4.1e-09 66.2 43 69.8
Sabra13G0010500 Salix brachista HOM05D015247 ORTHO05D010927 5.4e-09 65.9 43 69.8
Potri.013G011950 Populus trichocarpa HOM05D015247 ORTHO05D010927 1.6e-08 64.3 43 67.4
THA.LOC104820098 Tarenaya hassleriana HOM05D012757 ORTHO05D010927 5.9e-08 62.4 44 63.6
Prupe.6G317300 Prunus persica HOM05D010455 ORTHO05D010927 7.8e-08 62.0 90 44.4
Duzib177G0175 Durio zibethinus HOM05D016798 ORTHO05D016261 1.3e-07 61.2 34 67.6
FAN05G0049 Fragaria x ananassa HOM05D023588 ORTHO05D025400 1.7e-07 60.8 56 55.4
THA.LOC104802786 Tarenaya hassleriana HOM05D012757 ORTHO05D010927 2.9e-07 60.1 92 45.7
Lsat_1_v5_gn_9_124561 Lactuca sativa HOM05D010455 ORTHO05D010927 3.9e-07 59.7 65 47.7
Ciclev10003158m.g Citrus clementina HOM05D015247 ORTHO05D010927 6.6e-07 58.9 44 59.1
CARHR186470 Cardamine hirsuta HOM05D012757 ORTHO05D010927 8.6e-07 58.5 35 71.4
COL.COLO4_03800 Corchorus olitorius HOM05D016798 ORTHO05D016261 2.5e-06 57.0 34 73.5
Ah.06g190030 Amaranthus hybridus HOM05D031177 ORTHO05D026471 4.3e-06 56.2 39 66.7
Thhalv10005673m.g Eutrema salsugineum HOM05D012757 ORTHO05D010927 9.5e-06 55.1 35 68.6
FvH4_6g07020 Fragaria vesca HOM05D023588 ORTHO05D025400 9.5e-06 55.1 65 46.2
FAN14G1661 Fragaria x ananassa HOM05D023588 ORTHO05D025400 9.5e-06 55.1 65 46.2


User provided reference genes

Program Settings