Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc01g099700.3 Solanum lycopersicum HOM05D006406 ORTHO05D007883 1.1e-184 649.8 328 100.0
Sopen01g043220 Solanum pennellii HOM05D006406 ORTHO05D007883 2.5e-181 638.6 328 98.5
PGSC0003DMG400007542 Solanum tuberosum HOM05D006406 ORTHO05D007883 6.1e-159 564.3 296 92.9
CAN.G1459.10 Capsicum annuum HOM05D006406 ORTHO05D007883 1.5e-152 543.1 334 83.2
Peaxi162Scf00037g01125 Petunia axillaris HOM05D006406 ORTHO05D007883 2.0e-149 532.7 332 80.4
Nitab4.5_0003658g0090 Nicotiana tabacum HOM05D006406 ORTHO05D007883 2.6e-149 532.3 342 81.0
Nitab4.5_0003844g0020 Nicotiana tabacum HOM05D006406 ORTHO05D007883 9.4e-144 513.8 330 81.8
Oeu043348.1 Olea europaea HOM05D006406 ORTHO05D007883 2.9e-124 449.1 314 71.0
Lj9C146T2 Lonicera japonica HOM05D006406 ORTHO05D007883 1.7e-121 439.9 309 68.0
Cfa006628 Carpinus fangiana HOM05D006406 ORTHO05D007883 5.0e-121 438.3 341 63.0
Haze_04140 Corylus avellana HOM05D006406 ORTHO05D007883 8.6e-121 437.6 302 67.9
GSVIVG01031144001 Vitis vinifera HOM05D006406 ORTHO05D007883 8.6e-121 437.6 297 69.7
Aqoxy5G00730 Aquilegia oxysepala HOM05D006406 ORTHO05D007883 1.9e-120 436.4 321 65.4
Thecc.05G312900 Theobroma cacao HOM05D006406 ORTHO05D007883 1.9e-120 436.4 318 64.5
TAR633G0157 Trochodendron aralioides HOM05D006406 ORTHO05D007883 9.5e-120 434.1 324 65.7
COL.COLO4_10518 Corchorus olitorius HOM05D006406 ORTHO05D007883 1.6e-119 433.3 300 67.0
Duzib177G0190 Durio zibethinus HOM05D006406 ORTHO05D007883 4.7e-119 431.8 297 67.3
Hma1.2p1_1212F.1_g267260 Hydrangea macrophylla HOM05D006406 ORTHO05D007883 8.1e-119 431.0 340 63.5
Manes.08G117600 Manihot esculenta HOM05D006406 ORTHO05D007883 1.1e-118 430.6 341 60.1
SalBow7G2778 Salvia bowleyana HOM05D006406 ORTHO05D007883 1.4e-118 430.3 290 69.3
SGA_v2.0_scaffold172G38986 Striga asiatica HOM05D006406 ORTHO05D007883 8.9e-118 427.6 312 67.0
MD04G1200800 Malus domestica HOM05D006406 ORTHO05D007883 2.6e-117 426.0 304 67.1
CiPaw.08G161900 Carya illinoinensis HOM05D006406 ORTHO05D007883 5.8e-117 424.9 318 64.5
Glyma.03G235700 Glycine max HOM05D006406 ORTHO05D007883 5.8e-117 424.9 334 62.9
Sabra13G0015900 Salix brachista HOM05D006406 ORTHO05D007883 9.8e-117 424.1 346 60.7
Sabra13G0020100 Salix brachista HOM05D006406 ORTHO05D007883 1.3e-116 423.7 346 61.0
QL03p020986 Quercus lobata HOM05D006406 ORTHO05D007883 2.2e-116 422.9 302 66.9
QL03p021882 Quercus lobata HOM05D006406 ORTHO05D007883 2.9e-116 422.5 304 66.4
Hund07096 Selenicereus undatus HOM05D006406 ORTHO05D007883 2.9e-116 422.5 298 66.8
vmacro04816 Vaccinium macrocarpon HOM05D006406 ORTHO05D007883 3.7e-116 422.2 355 61.1
Cpa.g.sc48.95 Carica papaya HOM05D006406 ORTHO05D007883 1.1e-115 420.6 298 65.4
Ciclev10001711m.g Citrus clementina HOM05D006406 ORTHO05D007883 1.9e-115 419.9 303 64.7
Potri.013G017100 Populus trichocarpa HOM05D006406 ORTHO05D007883 2.4e-115 419.5 348 59.2
MBI18_g46420_MAGBIO Magnolia biondii HOM05D006406 ORTHO05D007883 3.2e-115 419.1 339 61.9
EL10Ac4g09916 Beta vulgaris HOM05D006406 ORTHO05D007883 5.4e-115 418.3 291 68.0
unitig_52.g17112 Utricularia gibba HOM05D006406 ORTHO05D007883 5.4e-115 418.3 336 62.2
Gohir.A13G109200 Gossypium hirsutum HOM05D006406 ORTHO05D007883 9.2e-115 417.5 338 60.4
Rhsim07G0188300 Rhododendron simsii HOM05D006406 ORTHO05D007883 1.2e-114 417.2 297 67.0
Gorai.013G125700 Gossypium raimondii HOM05D006406 ORTHO05D007883 1.6e-114 416.8 337 59.9
Medtr7g112650 Medicago truncatula HOM05D006406 ORTHO05D007883 2.7e-114 416.0 322 62.1
Carub.0006s2486 Capsella rubella HOM05D006406 ORTHO05D007883 4.6e-114 415.2 321 61.1
Ca_05800_v3 Cicer arietinum L. HOM05D006406 ORTHO05D007883 6.0e-114 414.8 327 61.8
Gohir.D13G112000 Gossypium hirsutum HOM05D006406 ORTHO05D007883 7.8e-114 414.5 309 63.8
Nn4g25830 Nelumbo nucifera HOM05D006406 ORTHO05D007883 7.8e-114 414.5 325 62.8
Actinidia35561 Actinidia chinensis HOM05D006406 ORTHO05D007883 1.0e-113 414.1 347 61.1
RcHm_v2.0_Chr3g0455711 Rosa chinensis HOM05D006406 ORTHO05D007883 1.0e-113 414.1 302 64.6
Hund07097 Selenicereus undatus HOM05D006406 ORTHO05D007883 2.3e-113 412.9 286 68.2
Migut.N01744 Erythranthe guttata HOM05D006406 ORTHO05D007883 3.0e-113 412.5 310 65.5
CsaV3_1G038840 Cucumis sativus L. HOM05D006406 ORTHO05D007883 3.9e-113 412.1 317 60.9
Sc16g0008820 Simmondsia chinensis HOM05D006406 ORTHO05D007883 3.9e-113 412.1 323 62.2
TPR.G33225 Trifolium pratense HOM05D006406 ORTHO05D007883 3.9e-113 412.1 328 61.9
Atru.chr2.29 Acer truncatum HOM05D006406 ORTHO05D007883 6.6e-113 411.4 298 65.4
TWI12G0288 Tripterygium wilfordii HOM05D006406 ORTHO05D007883 6.6e-113 411.4 293 68.3
arahy.Tifrunner.gnm1.ann1.Q6XDLT Arachis hypogaea HOM05D006406 ORTHO05D007883 1.9e-112 409.8 312 62.5
Lalb_Chr18g0045761 Lupinus albus HOM05D006406 ORTHO05D007883 1.9e-112 409.8 335 60.3
PGR083G2713 Punica granatum HOM05D006406 ORTHO05D007883 2.5e-112 409.5 296 66.9
Phvul.006G089700 Phaseolus vulgaris HOM05D006406 ORTHO05D007883 4.3e-112 408.7 317 62.8
arahy.Tifrunner.gnm1.ann1.PP7FUY Arachis hypogaea HOM05D006406 ORTHO05D007883 5.6e-112 408.3 312 62.2
Psat0s27g0120 Pisum sativum HOM05D006406 ORTHO05D007883 5.6e-112 408.3 315 63.5
Eucgr.B01914 Eucalyptus grandis HOM05D006406 ORTHO05D007883 1.6e-111 406.8 351 59.0
VMungo0540G0116 Vigna mungo HOM05D006406 ORTHO05D007883 1.6e-111 406.8 335 61.2
ClCG03G017120 Citrullus lanatus HOM05D006406 ORTHO05D007883 8.1e-111 404.4 294 63.6
Sed0006495 Sechium edule HOM05D006406 ORTHO05D007883 1.4e-110 403.7 318 61.6
TWI36G0652 Tripterygium wilfordii HOM05D006406 ORTHO05D007883 1.8e-110 403.3 293 64.5
Sp2g20880 Schrenkiella parvula HOM05D006406 ORTHO05D007883 4.0e-110 402.1 310 61.0
CANSAT54G1062 Cannabis sativa HOM05D006406 ORTHO05D007883 1.2e-109 400.6 321 59.2
AT5G27710 Arabidopsis thaliana HOM05D006406 ORTHO05D007883 1.5e-109 400.2 314 61.1
Lj1g0022852 Lotus japonicus HOM05D006406 ORTHO05D007883 1.5e-109 400.2 308 62.3
Aa31LG11G9460 Aethionema arabicum HOM05D006406 ORTHO05D007883 2.0e-109 399.8 325 57.8
AL6G39250 Arabidopsis lyrata HOM05D006406 ORTHO05D007883 2.6e-109 399.4 313 59.7
Thhalv10005730m.g Eutrema salsugineum HOM05D006406 ORTHO05D007883 1.7e-108 396.7 332 59.0
CSS0003718 Camellia sinensis var. sinensis HOM05D006406 ORTHO05D007883 1.1e-107 394.0 340 58.5
PSO210G1514 Papaver somniferum HOM05D006406 ORTHO05D007883 7.8e-106 387.9 323 60.7
FAN14G3705 Fragaria x ananassa HOM05D006406 ORTHO05D007883 1.5e-104 383.6 288 63.9
THA.LOC104818716 Tarenaya hassleriana HOM05D006406 ORTHO05D007883 1.9e-104 383.3 311 60.1
Lsat_1_v5_gn_9_88181 Lactuca sativa HOM05D006406 ORTHO05D007883 3.3e-104 382.5 329 59.3
Prupe.6G320900 Prunus persica HOM05D006406 ORTHO05D007883 3.3e-104 382.5 333 57.7
ECA236G2290 Erigeron canadensis HOM05D006406 ORTHO05D007883 4.3e-104 382.1 282 62.8
HanXRQChr11g0339311 Helianthus annuus HOM05D006406 ORTHO05D007883 7.3e-104 381.3 295 63.4
PSO210G1688 Papaver somniferum HOM05D006406 ORTHO05D007883 1.6e-103 380.2 323 59.4
AUR62000764 Chenopodium quinoa HOM05D006406 ORTHO05D007883 3.1e-102 375.9 286 64.0
A09p05410 Brassica napus HOM05D006406 ORTHO05D007883 1.2e-101 374.0 313 59.7
BraA09t36179Z Brassica rapa HOM05D006406 ORTHO05D007883 1.5e-101 373.6 313 59.7
BcaB04g19684 Brassica carinata HOM05D006406 ORTHO05D007883 7.6e-101 371.3 330 56.7
FAN05G5419 Fragaria x ananassa HOM05D006406 ORTHO05D007883 7.6e-101 371.3 285 62.5
PGSC0003DMG400024710 Solanum tuberosum HOM05D006406 ORTHO05D007883 2.2e-100 369.8 224 89.7
Cc02_g34120 Coffea canephora HOM05D006406 ORTHO05D007883 1.1e-99 367.5 215 78.1
CARHR186230 Cardamine hirsuta HOM05D006406 ORTHO05D007883 5.4e-99 365.2 287 59.6
Ah.06g189770 Amaranthus hybridus HOM05D006406 ORTHO05D007883 2.1e-98 363.2 274 63.9
Dinv30810 Davidia involucrata HOM05D006406 ORTHO05D007883 2.7e-98 362.8 250 68.8
BcaC04g23642 Brassica carinata HOM05D006406 ORTHO05D007883 6.0e-98 361.7 314 58.6
CDE11G0411 Ceratophyllum demersum HOM05D001335 ORTHO05D001184 7.8e-98 361.3 303 56.1
Os07g0673000 Oryza sativa ssp. japonica HOM05D006406 ORTHO05D007883 3.0e-97 359.4 264 61.0
C09p05890 Brassica napus HOM05D006406 ORTHO05D007883 5.1e-97 358.6 315 58.7
BolC9t53515H Brassica oleracea HOM05D006406 ORTHO05D007883 5.1e-97 358.6 315 58.7
AUR62005205 Chenopodium quinoa HOM05D006406 ORTHO05D007883 6.2e-95 351.7 302 58.6
DCAR_029393 Daucus carota HOM05D006406 ORTHO05D007883 2.6e-93 346.3 326 55.2
ATR0796G153 Amborella trichopoda HOM05D006406 ORTHO05D007883 1.7e-89 333.6 229 65.1
Glyma.19G233500 Glycine max HOM05D006406 ORTHO05D007883 9.6e-88 327.8 288 59.7
SEGI_05797 Sequoiadendron giganteum HOM05D006406 ORTHO05D007883 1.4e-86 323.9 295 52.9
FvH4_6g06560 Fragaria vesca HOM05D006406 ORTHO05D007883 5.1e-73 278.9 225 59.6
MELO3C015308.2 Cucumis melo HOM05D006406 ORTHO05D007883 2.1e-71 273.5 323 44.9
Pp3c6_26830 Physcomitrium patens HOM05D006406 ORTHO05D007883 1.4e-67 260.8 232 50.9
SMO172G0153 Selaginella moellendorffii HOM05D006406 ORTHO05D007883 2.7e-66 256.5 285 45.3
Mapoly0054s0047 Marchantia polymorpha HOM05D006406 ORTHO05D007883 3.6e-66 256.1 300 43.3
Oeu043349.1 Olea europaea HOM05D006406 ORTHO05D007883 6.1e-66 255.4 200 66.0
Hma1.2p1_1212F.1_g267270 Hydrangea macrophylla HOM05D006406 ORTHO05D007883 7.9e-66 255.0 226 59.7
SMO172G0232 Selaginella moellendorffii HOM05D006406 ORTHO05D007883 3.0e-65 253.1 282 45.4
Zm00001eb111280 Zea mays HOM05D006406 ORTHO05D007883 1.5e-64 250.8 209 56.0
HPP92_011843 Vanilla planifolia HOM05D006406 ORTHO05D007883 5.0e-60 235.7 295 44.1
CBR_g19246 Chara braunii HOM05D006406 ORTHO05D007883 6.3e-55 218.8 249 42.6
SMO198G0100 Selaginella moellendorffii HOM05D006406 ORTHO05D007883 2.6e-48 196.8 264 40.5
PSO421G0497 Papaver somniferum HOM05D006406 ORTHO05D007883 2.2e-47 193.7 298 38.3
arahy.Tifrunner.gnm1.ann1.AST3BR Arachis hypogaea HOM05D006406 ORTHO05D007883 3.2e-43 179.9 155 53.5
MSTRG.16393 Avicennia marina HOM05D006406 ORTHO05D007883 3.2e-35 153.3 153 57.5
AagrBONN_evm.TU.Sc2ySwM_362.2555 Anthoceros agrestis HOM05D006406 ORTHO05D007883 1.8e-30 137.5 114 54.4
FAN02G3513 Fragaria x ananassa HOM05D006406 ORTHO05D007883 4.1e-22 109.8 127 44.9
Lsat_1_v5_gn_5_186620 Lactuca sativa HOM05D006406 ORTHO05D007883 1.1e-14 85.1 131 38.9
BcaB07g32734 Brassica carinata HOM05D006406 ORTHO05D007883 1.8e-14 84.3 131 40.5
AL3G41450 Arabidopsis lyrata HOM05D000059 ORTHO05D000128 3.6e-10 70.1 41 70.7
Aqoxy601s001 Aquilegia oxysepala HOM05D006406 ORTHO05D007883 1.7e-07 61.2 33 78.8
Cre09.g392700 Chlamydomonas reinhardtii HOM05D006406 ORTHO05D007883 8.3e-07 58.9 95 40.0


User provided reference genes

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