Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc01g099450.4 Solanum lycopersicum HOM05D008896 ORTHO05D011108 4.2e-66 254.6 133 100.0
Nitab4.5_0008329g0010 Nicotiana tabacum HOM05D008896 ORTHO05D011108 5.0e-51 204.5 130 80.0
Nitab4.5_0002344g0030 Nicotiana tabacum HOM05D008896 ORTHO05D011108 3.7e-46 188.3 130 76.9
arahy.Tifrunner.gnm1.ann1.KA5826 Arachis hypogaea HOM05D008896 ORTHO05D011108 1.3e-30 136.7 112 59.8
Oeu023736.1 Olea europaea HOM05D008896 ORTHO05D011108 4.5e-28 128.3 108 55.6
CiPaw.07G020600 Carya illinoinensis HOM05D008896 ORTHO05D011108 7.7e-28 127.5 113 55.8
COL.COLO4_10503 Corchorus olitorius HOM05D008896 ORTHO05D011108 2.2e-27 125.9 112 54.5
TAR633G0524 Trochodendron aralioides HOM05D008896 ORTHO05D011108 3.8e-27 125.2 109 56.0
Hma1.2p1_1374F.1_g278850 Hydrangea macrophylla HOM05D008896 ORTHO05D011108 1.1e-26 123.6 104 56.7
Gohir.A11G266700 Gossypium hirsutum HOM05D008896 ORTHO05D011108 2.5e-26 122.5 104 55.8
Lj5g0009211 Lotus japonicus HOM05D008896 ORTHO05D011108 3.2e-26 122.1 112 54.5
Rhsim05G0141300 Rhododendron simsii HOM05D008896 ORTHO05D011108 3.2e-26 122.1 110 54.5
Glyma.10G152400 Glycine max HOM05D008896 ORTHO05D011108 9.4e-26 120.6 112 50.9
Gohir.D11G277000 Gossypium hirsutum HOM05D008896 ORTHO05D011108 9.4e-26 120.6 104 54.8
Gorai.007G299100 Gossypium raimondii HOM05D008896 ORTHO05D011108 9.4e-26 120.6 104 54.8
Manes.09G169500 Manihot esculenta HOM05D008896 ORTHO05D011108 1.6e-25 119.8 105 54.3
Phvul.007G196500 Phaseolus vulgaris HOM05D008896 ORTHO05D011108 2.1e-25 119.4 108 50.9
TPR.G6111 Trifolium pratense HOM05D008896 ORTHO05D011108 4.7e-25 118.2 109 53.2
Glyma.20G235900 Glycine max HOM05D008896 ORTHO05D011108 6.1e-25 117.9 112 52.7
Aqoxy2G03012 Aquilegia oxysepala HOM05D008896 ORTHO05D011108 8.0e-25 117.5 105 54.3
Prupe.6G321900 Prunus persica HOM05D008896 ORTHO05D011108 1.0e-24 117.1 110 48.2
Lalb_Chr21g0310631 Lupinus albus HOM05D008896 ORTHO05D011108 1.4e-24 116.7 110 50.0
FAN14G0626 Fragaria x ananassa HOM05D000246 ORTHO05D007179 3.0e-24 115.5 110 49.1
FvH4_6g06431 Fragaria vesca HOM05D008896 ORTHO05D011108 4.0e-24 115.2 110 49.1
Medtr1g083240 Medicago truncatula HOM05D008896 ORTHO05D011108 5.2e-24 114.8 109 51.4
FAN02G0411 Fragaria x ananassa HOM05D008896 ORTHO05D011108 8.8e-24 114.0 110 47.3
MBI18_g14081_MAGBIO Magnolia biondii HOM05D008896 ORTHO05D011108 1.2e-23 113.6 110 51.8
MSTRG.16541 Avicennia marina HOM05D008896 ORTHO05D011108 2.0e-23 112.8 107 50.5
Potri.005G026450 Populus trichocarpa HOM05D008896 ORTHO05D011108 2.0e-23 112.8 112 50.0
Sabra05G0031700 Salix brachista HOM05D000359 ORTHO05D007179 1.7e-22 109.8 112 46.4
Haze_04155 Corylus avellana HOM05D000246 ORTHO05D007179 4.8e-22 108.2 98 51.0
Cfa006619 Carpinus fangiana HOM05D000246 ORTHO05D007179 8.3e-22 107.5 98 50.0
Thecc.05G311800 Theobroma cacao HOM05D008896 ORTHO05D011108 1.1e-21 107.1 106 49.1
FAN05G1763 Fragaria x ananassa HOM05D008896 ORTHO05D011108 2.7e-20 102.4 99 48.5
QL03p011654 Quercus lobata HOM05D008896 ORTHO05D011108 2.3e-19 99.4 112 43.8
Cpa.g.sc48.83 Carica papaya HOM05D000246 ORTHO05D007179 3.8e-19 98.6 82 53.7
DCAR_003349 Daucus carota HOM05D008896 ORTHO05D011108 3.0e-16 89.0 94 46.8
EL10Ac4g09932 Beta vulgaris HOM05D008896 ORTHO05D011108 1.6e-12 76.6 73 47.9
QL03p021682 Quercus lobata HOM05D008896 ORTHO05D011108 4.5e-12 75.1 74 48.6
ATR0706G242 Amborella trichopoda HOM05D008896 ORTHO05D011108 1.3e-11 73.6 94 44.7
Carub.0006s2491 Capsella rubella HOM05D008896 ORTHO05D011108 1.3e-11 73.6 105 41.0
Sp2g20840 Schrenkiella parvula HOM05D000246 ORTHO05D007179 1.7e-11 73.2 83 47.0
BcaNung04539 Brassica carinata HOM05D008896 ORTHO05D011108 3.9e-11 72.0 104 39.4
C07p40980 Brassica napus HOM05D008896 ORTHO05D011108 3.9e-11 72.0 99 41.4
CANSAT54G2268 Cannabis sativa HOM05D008896 ORTHO05D000001 3.9e-11 72.0 88 45.5
BraA06t26661Z Brassica rapa HOM05D000246 ORTHO05D007179 6.6e-11 71.2 90 43.3
C07p41090 Brassica napus HOM05D000246 ORTHO05D007179 8.6e-11 70.9 90 44.4
BolC7t44636H Brassica oleracea HOM05D000246 ORTHO05D007179 8.6e-11 70.9 90 44.4


User provided reference genes

Program Settings