Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc01g096920.3 Solanum lycopersicum HOM05D006718 ORTHO05D008492 0.0e+00 1269.6 691 100.0
Sopen01g040630 Solanum pennellii HOM05D006718 ORTHO05D008492 0.0e+00 1223.0 695 96.8
PGSC0003DMG400027524 Solanum tuberosum HOM05D006718 ORTHO05D008492 0.0e+00 1148.7 693 92.4
CAN.G134.56 Capsicum annuum HOM05D006718 ORTHO05D008492 4.0e-245 851.7 683 73.8
Nitab4.5_0001611g0090 Nicotiana tabacum HOM05D006718 ORTHO05D008492 1.1e-234 817.0 701 70.5
Peaxi162Scf00647g00315 Petunia axillaris HOM05D006718 ORTHO05D008492 3.2e-218 762.3 685 68.6
Nitab4.5_0005056g0030 Nicotiana tabacum HOM05D006718 ORTHO05D008492 3.7e-182 642.5 720 59.9
Dinv24591 Davidia involucrata HOM05D006718 ORTHO05D008492 1.7e-62 245.0 716 33.7
MSTRG.5086 Avicennia marina HOM05D006718 ORTHO05D008492 5.2e-51 206.8 516 37.2
Hund06826 Selenicereus undatus HOM05D006718 ORTHO05D008492 2.9e-49 201.1 592 35.1
SGA_v2.0_scaffold196G40987 Striga asiatica HOM05D006718 ORTHO05D008492 8.3e-49 199.5 516 36.6
CiPaw.13G047100 Carya illinoinensis HOM05D006718 ORTHO05D008492 4.1e-48 197.2 441 42.4
Atru.chr12.1182 Acer truncatum HOM05D006718 ORTHO05D008492 4.6e-47 193.7 334 41.6
QL04p050382 Quercus lobata HOM05D006718 ORTHO05D008492 6.0e-47 193.4 540 37.2
TWI38G0042 Tripterygium wilfordii HOM05D006718 ORTHO05D008492 2.3e-46 191.4 642 34.9
Gohir.A06G171400 Gossypium hirsutum HOM05D006718 ORTHO05D008492 7.3e-45 186.4 453 37.1
Lj7A493G35 Lonicera japonica HOM05D006718 ORTHO05D008492 7.3e-45 186.4 292 44.9
Thecc.10G129200 Theobroma cacao HOM05D006718 ORTHO05D008492 9.5e-45 186.0 503 34.8
Haze_03406 Corylus avellana HOM05D006718 ORTHO05D008492 1.2e-44 185.7 681 34.2
Gohir.D06G179500 Gossypium hirsutum HOM05D006718 ORTHO05D008492 1.4e-43 182.2 455 37.1
Gorai.010G210100 Gossypium raimondii HOM05D006718 ORTHO05D008492 2.3e-43 181.4 455 37.1
AUR62014308 Chenopodium quinoa HOM05D006718 ORTHO05D008492 4.0e-43 180.6 670 31.9
TAR369G0954 Trochodendron aralioides HOM05D006718 ORTHO05D008492 5.2e-43 180.3 518 35.7
AUR62034103 Chenopodium quinoa HOM05D006718 ORTHO05D008492 4.4e-42 177.2 656 31.9
SalBow4G0879 Salvia bowleyana HOM05D006718 ORTHO05D008492 7.5e-42 176.4 424 36.3
Cfa010452 Carpinus fangiana HOM05D006718 ORTHO05D008492 4.9e-41 173.7 663 32.6
EL10Ac4g08778 Beta vulgaris HOM05D006718 ORTHO05D008492 8.3e-41 172.9 670 31.8
CSS0042038 Camellia sinensis var. sinensis HOM05D006718 ORTHO05D008492 1.9e-40 171.8 241 46.5
MBI15_g36944_MAGBIO Magnolia biondii HOM05D006718 ORTHO05D008492 5.4e-40 170.2 422 36.7
DCAR_006628 Daucus carota HOM05D006718 ORTHO05D008492 7.0e-40 169.9 276 45.7
Ah.06g191200 Amaranthus hybridus HOM05D006718 ORTHO05D008492 1.6e-39 168.7 520 32.9
MD02G1263300 Malus domestica HOM05D006718 ORTHO05D008492 2.7e-39 167.9 588 32.3
unitig_899.g15585 Utricularia gibba HOM05D006718 ORTHO05D008492 2.7e-39 167.9 373 38.3
Sc09g0004890 Simmondsia chinensis HOM05D006718 ORTHO05D008492 6.0e-39 166.8 727 30.0
Duzib128G0030 Durio zibethinus HOM05D006718 ORTHO05D008492 1.9e-37 161.8 376 38.3
RcHm_v2.0_Chr3g0490591 Rosa chinensis HOM05D006718 ORTHO05D008492 4.3e-37 160.6 613 34.4
MD07G1054700 Malus domestica HOM05D006718 ORTHO05D008492 1.6e-36 158.7 589 33.8
Migut.N01880 Erythranthe guttata HOM05D006718 ORTHO05D008492 2.1e-36 158.3 232 44.4
Manes.07G082900 Manihot esculenta HOM05D006718 ORTHO05D008492 2.1e-36 158.3 576 32.3
Cc02_g32070 Coffea canephora HOM05D006718 ORTHO05D008492 2.8e-36 157.9 692 30.3
Migut.O00435 Erythranthe guttata HOM05D006718 ORTHO05D008492 2.8e-36 157.9 531 31.1
FAN23G2020 Fragaria x ananassa HOM05D006718 ORTHO05D008492 4.7e-36 157.1 419 39.9
Prupe.2G061400 Prunus persica HOM05D006718 ORTHO05D008492 1.1e-35 156.0 615 31.9
Nn2g14019 Nelumbo nucifera HOM05D006718 ORTHO05D008492 2.3e-35 154.8 740 30.3
CsaV3_6G004530 Cucumis sativus L. HOM05D006718 ORTHO05D008492 3.1e-35 154.5 517 35.4
MELO3C019922.2 Cucumis melo HOM05D006718 ORTHO05D008492 1.5e-34 152.1 582 31.6
PSO339G3483 Papaver somniferum HOM05D006718 ORTHO05D008492 2.6e-34 151.4 573 32.3
COL.COLO4_28900 Corchorus olitorius HOM05D006718 ORTHO05D008492 7.5e-34 149.8 241 42.3
THA.LOC104811338 Tarenaya hassleriana HOM05D006718 ORTHO05D008492 1.4e-32 145.6 454 32.6
Eucgr.J00311 Eucalyptus grandis HOM05D006718 ORTHO05D008492 2.4e-32 144.8 548 32.8
AT5G18440 Arabidopsis thaliana HOM05D006718 ORTHO05D008492 4.1e-32 144.1 404 34.4
ClCG08G008520 Citrullus lanatus HOM05D006718 ORTHO05D008492 4.1e-32 144.1 633 30.3
Ciclev10015184m.g Citrus clementina HOM05D006718 ORTHO05D008492 4.1e-32 144.1 473 33.2
PSO384G1654 Papaver somniferum HOM05D006718 ORTHO05D008492 7.1e-32 143.3 576 31.6
CANSAT56G0860 Cannabis sativa HOM05D006718 ORTHO05D008492 1.6e-31 142.1 692 31.4
FAN19G2415 Fragaria x ananassa HOM05D006718 ORTHO05D008492 1.6e-31 142.1 630 34.0
Thhalv10013325m.g Eutrema salsugineum HOM05D006718 ORTHO05D008492 2.7e-31 141.4 320 37.5
FvH4_1g30390 Fragaria vesca HOM05D006718 ORTHO05D008492 3.5e-31 141.0 637 33.6
Lalb_Chr25g0284721 Lupinus albus HOM05D006718 ORTHO05D008492 3.5e-31 141.0 600 31.7
ECA232G4797 Erigeron canadensis HOM05D006718 ORTHO05D008492 4.6e-31 140.6 643 30.0
Sed0008467 Sechium edule HOM05D006718 ORTHO05D008492 4.6e-31 140.6 577 34.1
FAN28G2084 Fragaria x ananassa HOM05D006718 ORTHO05D008492 1.3e-30 139.0 626 33.5
AL6G29690 Arabidopsis lyrata HOM05D006718 ORTHO05D008492 3.0e-30 137.9 478 30.3
PGR044G1203 Punica granatum HOM05D006718 ORTHO05D008492 3.0e-30 137.9 600 32.0
HanXRQChr09g0250361 Helianthus annuus HOM05D006718 ORTHO05D008492 3.9e-30 137.5 459 33.3
VMungo0647G0438 Vigna mungo HOM05D006718 ORTHO05D008492 1.5e-29 135.6 505 31.9
GSVIVG01027215001 Vitis vinifera HOM05D006718 ORTHO05D008492 1.5e-29 135.6 423 34.5
BolC9t58690H Brassica oleracea HOM05D006718 ORTHO05D008492 2.5e-29 134.8 485 32.6
Peaxi162Scf00558g00016 Petunia axillaris HOM05D006718 ORTHO05D008492 2.5e-29 134.8 205 45.9
BcaC04g18692 Brassica carinata HOM05D006718 ORTHO05D008492 3.3e-29 134.4 300 36.7
BraA10t44177Z Brassica rapa HOM05D006718 ORTHO05D008492 3.3e-29 134.4 247 39.3
Carub.0006s1670 Capsella rubella HOM05D006718 ORTHO05D008492 4.3e-29 134.0 470 30.4
C09p58250 Brassica napus HOM05D006718 ORTHO05D008492 5.6e-29 133.7 428 32.5
Sp6g25880 Schrenkiella parvula HOM05D006718 ORTHO05D008492 7.3e-29 133.3 540 32.2
Ca_03601_v3 Cicer arietinum L. HOM05D006718 ORTHO05D008492 1.2e-28 132.5 567 30.7
A10p21140 Brassica napus HOM05D006718 ORTHO05D008492 1.6e-28 132.1 437 32.3
Glyma.14G084400 Glycine max HOM05D006718 ORTHO05D008492 1.6e-28 132.1 674 29.2
Phvul.011G216700 Phaseolus vulgaris HOM05D006718 ORTHO05D008492 1.6e-28 132.1 681 29.8
vmacro20846 Vaccinium macrocarpon HOM05D006718 ORTHO05D008492 1.6e-28 132.1 447 33.3
Lj3g0008993 Lotus japonicus HOM05D006718 ORTHO05D008492 2.1e-28 131.7 331 36.3
BcaB08g36679 Brassica carinata HOM05D006718 ORTHO05D008492 2.8e-28 131.3 481 33.7
Os01g0814000 Oryza sativa ssp. japonica HOM05D006718 ORTHO05D008492 8.1e-28 129.8 260 36.2
ATR0068G071 Amborella trichopoda HOM05D006718 ORTHO05D008492 6.8e-27 126.7 433 35.6
HPP92_007508 Vanilla planifolia HOM05D006718 ORTHO05D008492 2.6e-26 124.8 325 36.6
Glyma.17G240500 Glycine max HOM05D006718 ORTHO05D008492 3.4e-26 124.4 684 27.6
Aa31LG11G11170 Aethionema arabicum HOM05D006718 ORTHO05D008492 9.9e-26 122.9 519 31.6
Zm00001eb149940 Zea mays HOM05D006718 ORTHO05D008492 2.2e-25 121.7 289 32.9
Aqoxy1G00086 Aquilegia oxysepala HOM05D006718 ORTHO05D008492 1.4e-24 119.0 643 28.8
CARHR194580 Cardamine hirsuta HOM05D006718 ORTHO05D008492 9.3e-24 116.3 335 34.0
TPR.G33809 Trifolium pratense HOM05D006718 ORTHO05D008492 1.2e-23 115.9 265 37.4
Sabra08G0007500 Salix brachista HOM05D006718 ORTHO05D008492 4.6e-23 114.0 699 29.8
Medtr2g067220 Medicago truncatula HOM05D006718 ORTHO05D008492 6.0e-23 113.6 435 31.0
Potri.010G246500 Populus trichocarpa HOM05D006718 ORTHO05D008492 1.3e-22 112.5 682 29.2
Lsat_1_v5_gn_4_139420 Lactuca sativa HOM05D006718 ORTHO05D008492 1.7e-22 112.1 630 29.7
Sabra10G0192200 Salix brachista HOM05D006718 ORTHO05D008492 8.7e-22 109.8 689 29.3
Potri.008G012250 Populus trichocarpa HOM05D006718 ORTHO05D008492 2.8e-20 104.8 369 36.6
THA.LOC104824416 Tarenaya hassleriana HOM05D006718 ORTHO05D008492 1.8e-19 102.1 508 28.5
Cpa.g.sc163.26 Carica papaya HOM05D006718 ORTHO05D008492 2.2e-17 95.1 232 34.9
FAN26G3384 Fragaria x ananassa HOM05D006718 ORTHO05D008492 3.8e-17 94.4 447 32.7
Rhsim01G0121600 Rhododendron simsii HOM05D006718 ORTHO05D008492 4.9e-17 94.0 723 30.0
CDE04G2801 Ceratophyllum demersum HOM05D001339 ORTHO05D003609 2.0e-10 72.0 585 26.7
CSS0030010 Camellia sinensis var. sinensis HOM05D006718 ORTHO05D008492 4.5e-10 70.9 290 31.7
A02p04900 Brassica napus HOM05D006718 ORTHO05D008492 5.8e-10 70.5 321 28.0
Oeu051588.1 Olea europaea HOM05D054970 ORTHO05D049444 5.8e-10 70.5 238 32.4
Pp3c27_4140 Physcomitrium patens HOM05D006718 ORTHO05D008492 5.4e-08 63.9 129 37.2
Migut.N01879 Erythranthe guttata HOM05D006718 ORTHO05D008492 7.9e-07 60.1 275 32.7
AagrBONN_evm.TU.Sc2ySwM_344.1162 Anthoceros agrestis HOM05D006718 ORTHO05D008492 1.8e-06 58.9 315 26.3


User provided reference genes

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