Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc01g096790.4 Solanum lycopersicum HOM05D000823 ORTHO05D000088 1.0e-47 193.0 93 100.0
Sopen01g040490 Solanum pennellii HOM05D000823 ORTHO05D000088 2.2e-45 185.3 93 95.7
CAN.G134.42 Capsicum annuum HOM05D000823 ORTHO05D000088 4.3e-25 117.9 88 67.0
Nitab4.5_0002687g0070 Nicotiana tabacum HOM05D000395 ORTHO05D000088 3.9e-18 94.7 73 63.0
Sed0000312 Sechium edule HOM05D007907 ORTHO05D009079 4.3e-09 64.7 73 47.9
MSTRG.16968 Avicennia marina HOM05D000823 ORTHO05D000088 2.8e-08 62.0 73 42.5
Lj7C16G12 Lonicera japonica HOM05D000395 ORTHO05D000088 4.8e-08 61.2 67 44.8
Cc07_g20980 Coffea canephora HOM05D000823 ORTHO05D000088 6.2e-08 60.8 71 42.3
Peaxi162Scf00016g01343 Petunia axillaris HOM05D000823 ORTHO05D000088 6.2e-08 60.8 86 37.2
Lj7C19G3 Lonicera japonica HOM05D000395 ORTHO05D000088 1.4e-07 59.7 67 44.8
Lj7A19G27 Lonicera japonica HOM05D000395 ORTHO05D000088 1.8e-07 59.3 76 39.5
Rhsim10G0125600 Rhododendron simsii HOM05D000823 ORTHO05D000088 1.8e-07 59.3 67 46.3
vmacro05287 Vaccinium macrocarpon HOM05D000823 ORTHO05D000088 1.8e-07 59.3 67 46.3
MELO3C007522.2 Cucumis melo HOM05D007907 ORTHO05D009079 2.4e-07 58.9 72 40.3
QL09p026218 Quercus lobata HOM05D000395 ORTHO05D000088 2.4e-07 58.9 81 38.3
Lj7C16T11 Lonicera japonica HOM05D000395 ORTHO05D000088 3.1e-07 58.5 76 39.5
Solyc01g108930.3 Solanum lycopersicum HOM05D000823 ORTHO05D000088 4.0e-07 58.2 76 38.2
Sopen01g051130 Solanum pennellii HOM05D000823 ORTHO05D000088 4.0e-07 58.2 79 39.2
GSVIVG01031850001 Vitis vinifera HOM05D000823 ORTHO05D009132 4.0e-07 58.2 85 35.3
ClCG01G016540 Citrullus lanatus HOM05D000395 ORTHO05D000088 5.3e-07 57.8 73 39.7
Manes.13G131000 Manihot esculenta HOM05D000823 ORTHO05D000088 5.3e-07 57.8 82 36.6
MELO3C007521.2 Cucumis melo HOM05D000823 ORTHO05D000088 9.0e-07 57.0 75 38.7
Lsat_1_v5_gn_3_94221 Lactuca sativa HOM05D000823 ORTHO05D000088 9.0e-07 57.0 67 41.8
CiPaw.06G020300 Carya illinoinensis HOM05D000395 ORTHO05D000088 1.5e-06 56.2 81 37.0
CSS0012563 Camellia sinensis var. sinensis HOM05D000395 ORTHO05D000088 2.6e-06 55.5 76 39.5
CAN.G322.80 Capsicum annuum HOM05D000823 ORTHO05D000088 3.4e-06 55.1 76 36.8
CsaV3_6G042820 Cucumis sativus L. HOM05D007907 ORTHO05D009079 3.4e-06 55.1 72 38.9
Actinidia36524 Actinidia chinensis HOM05D001349 ORTHO05D001980 4.4e-06 54.7 79 38.0
CsaV3_6G042810 Cucumis sativus L. HOM05D000823 ORTHO05D000088 4.4e-06 54.7 75 37.3
Nitab4.5_0008194g0030 Nicotiana tabacum HOM05D000823 ORTHO05D000088 4.4e-06 54.7 67 41.8
CSS0000969 Camellia sinensis var. sinensis HOM05D000823 ORTHO05D000088 5.8e-06 54.3 69 43.5
CSS0025372 Camellia sinensis var. sinensis HOM05D000823 ORTHO05D000088 5.8e-06 54.3 69 43.5
Eucgr.H01962 Eucalyptus grandis HOM05D000395 ORTHO05D000088 7.6e-06 53.9 76 34.2
Eucgr.L02216 Eucalyptus grandis HOM05D000395 ORTHO05D000088 7.6e-06 53.9 76 34.2
MD04G1034600 Malus domestica HOM05D000823 ORTHO05D000088 7.6e-06 53.9 73 38.4
arahy.Tifrunner.gnm1.ann1.4VG87B Arachis hypogaea HOM05D000823 ORTHO05D000088 9.9e-06 53.5 75 36.0
EL10Ac3g07243 Beta vulgaris HOM05D010007 ORTHO05D006083 9.9e-06 53.5 80 40.0


User provided reference genes

Program Settings