Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc01g096510.2 Solanum lycopersicum HOM05D002974 ORTHO05D002992 1.0e-79 300.1 159 100.0
Sopen01g040240 Solanum pennellii HOM05D002974 ORTHO05D002992 1.8e-76 289.3 159 96.2
PGSC0003DMG400005401 Solanum tuberosum HOM05D002974 ORTHO05D002992 5.5e-57 224.6 165 76.4
CAN.G134.10 Capsicum annuum HOM05D002974 ORTHO05D002992 1.9e-44 183.0 163 69.3
Nitab4.5_0003481g0110 Nicotiana tabacum HOM05D002974 ORTHO05D002992 9.5e-33 144.1 156 60.9
Nitab4.5_0005808g0010 Nicotiana tabacum HOM05D002974 ORTHO05D002992 7.6e-30 134.4 156 56.4
Oeu064130.1 Olea europaea HOM05D002974 ORTHO05D002992 3.0e-18 95.9 154 45.5
MSTRG.28034 Avicennia marina HOM05D002974 ORTHO05D002992 5.1e-18 95.1 155 44.5
Dinv32015 Davidia involucrata HOM05D002974 ORTHO05D002992 1.1e-15 87.4 154 40.9
Migut.N01854 Erythranthe guttata HOM05D002974 ORTHO05D002992 5.3e-15 85.1 161 39.1
Oeu053079.1 Olea europaea HOM05D002974 ORTHO05D002992 1.2e-14 84.0 156 39.1
MSTRG.5073 Avicennia marina HOM05D002974 ORTHO05D002992 2.0e-14 83.2 158 41.1
Dinv44699 Davidia involucrata HOM05D002974 ORTHO05D002992 4.4e-14 82.0 157 43.9
Oeu006786.1 Olea europaea HOM05D002974 ORTHO05D002992 9.9e-14 80.9 153 42.5
Rhsim07G0068200 Rhododendron simsii HOM05D002974 ORTHO05D002992 2.9e-13 79.3 134 44.8
SGA_v2.0_scaffold232G43495 Striga asiatica HOM05D002974 ORTHO05D002992 8.4e-13 77.8 160 38.1
Sc11g0006360 Simmondsia chinensis HOM05D002974 ORTHO05D002992 9.3e-12 74.3 108 43.5
EL10Ac2g02772 Beta vulgaris HOM05D012416 ORTHO05D002992 1.6e-11 73.6 154 36.4
Migut.B01240 Erythranthe guttata HOM05D002974 ORTHO05D002992 2.7e-11 72.8 156 37.2
Potri.001G029700 Populus trichocarpa HOM05D002974 ORTHO05D002992 2.7e-11 72.8 134 44.0
Prupe.2G041200 Prunus persica HOM05D002974 ORTHO05D002992 4.6e-11 72.0 67 58.2
CiPaw.14G008700 Carya illinoinensis HOM05D002974 ORTHO05D002992 1.7e-10 70.1 79 55.7
Peaxi162Scf00082g00006 Petunia axillaris HOM05D002974 ORTHO05D002992 1.7e-10 70.1 49 77.6
SGA_v2.0_scaffold43G16289 Striga asiatica HOM05D002974 ORTHO05D002992 1.7e-10 70.1 140 37.1
QL04p017813 Quercus lobata HOM05D002974 ORTHO05D002992 3.0e-10 69.3 59 66.1
QL04p018674 Quercus lobata HOM05D002974 ORTHO05D002992 3.0e-10 69.3 59 66.1
FAN10G2850 Fragaria x ananassa HOM05D002974 ORTHO05D002992 3.9e-10 68.9 59 61.0
FvH4_7g03520 Fragaria vesca HOM05D002974 ORTHO05D002992 5.1e-10 68.6 59 64.4
FAN01G3097 Fragaria x ananassa HOM05D002974 ORTHO05D002992 5.1e-10 68.6 59 61.0
FAN03G0828 Fragaria x ananassa HOM05D002974 ORTHO05D002992 5.1e-10 68.6 59 61.0
FAN06G3677 Fragaria x ananassa HOM05D002974 ORTHO05D002992 5.1e-10 68.6 59 64.4
Oeu011571.1 Olea europaea HOM05D002974 ORTHO05D002992 5.1e-10 68.6 156 38.5
ClCG05G026910 Citrullus lanatus HOM05D002974 ORTHO05D002992 8.7e-10 67.8 65 56.9
Nn7g36749 Nelumbo nucifera HOM05D002974 ORTHO05D002992 8.7e-10 67.8 125 40.8
RcHm_v2.0_Chr1g0325821 Rosa chinensis HOM05D002974 ORTHO05D002992 8.7e-10 67.8 59 64.4
CsaV3_5G036860 Cucumis sativus L. HOM05D002974 ORTHO05D002992 1.1e-09 67.4 58 65.5
SalBow6G5116 Salvia bowleyana HOM05D002974 ORTHO05D002992 1.1e-09 67.4 131 38.9
COL.COLO4_20695 Corchorus olitorius HOM05D003550 ORTHO05D004336 1.5e-09 67.0 73 54.8
Manes.11G007000 Manihot esculenta HOM05D002974 ORTHO05D002992 1.5e-09 67.0 133 41.4
MELO3C012484.2 Cucumis melo HOM05D002974 ORTHO05D002992 2.5e-09 66.2 52 67.3
Nn2g14777 Nelumbo nucifera HOM05D002974 ORTHO05D002992 7.3e-09 64.7 121 44.6
TWI15G0153 Tripterygium wilfordii HOM05D002974 ORTHO05D002992 9.6e-09 64.3 132 38.6
Manes.04G157400 Manihot esculenta HOM05D002974 ORTHO05D002992 1.3e-08 63.9 132 35.6
Medtr3g013980 Medicago truncatula HOM05D002974 ORTHO05D002992 1.3e-08 63.9 127 40.2
Potri.003G194700 Populus trichocarpa HOM05D002974 ORTHO05D002992 1.3e-08 63.9 132 36.4
AUR62026884 Chenopodium quinoa HOM05D012416 ORTHO05D002992 1.6e-08 63.5 63 55.6
AUR62031748 Chenopodium quinoa HOM05D012416 ORTHO05D006373 1.6e-08 63.5 63 55.6
AUR62044059 Chenopodium quinoa HOM05D012416 ORTHO05D006373 1.6e-08 63.5 63 55.6
Sed0006618 Sechium edule HOM05D002974 ORTHO05D002992 2.1e-08 63.2 58 58.6
Ca_12961_v3 Cicer arietinum L. HOM05D002974 ORTHO05D002992 2.8e-08 62.8 128 40.6
Sc10g0004500 Simmondsia chinensis HOM05D002974 ORTHO05D002992 2.8e-08 62.8 98 45.9
CiPaw.13G015100 Carya illinoinensis HOM05D002974 ORTHO05D002992 3.6e-08 62.4 106 42.5
Eucgr.G03218 Eucalyptus grandis HOM05D002974 ORTHO05D002992 3.6e-08 62.4 47 66.0
Lj3g0008937 Lotus japonicus HOM05D002974 ORTHO05D002992 4.8e-08 62.0 62 56.5
TPR.G31150 Trifolium pratense HOM05D002974 ORTHO05D002992 4.8e-08 62.0 128 39.8
Cfa010941 Carpinus fangiana HOM05D002974 ORTHO05D002992 6.2e-08 61.6 104 41.3
THA.LOC104820144 Tarenaya hassleriana HOM05D002974 ORTHO05D002992 6.2e-08 61.6 94 46.8
Gohir.D04G016200 Gossypium hirsutum HOM05D002974 ORTHO05D002992 8.1e-08 61.2 121 38.8
PGR031G0048 Punica granatum HOM05D002974 ORTHO05D002992 8.1e-08 61.2 126 39.7
Sabra03G0145400 Salix brachista HOM05D002974 ORTHO05D002992 8.1e-08 61.2 134 41.0
SalBow5G5227 Salvia bowleyana HOM05D002974 ORTHO05D002992 8.1e-08 61.2 103 43.7
Lalb_Chr19g0133001 Lupinus albus HOM05D002974 ORTHO05D002992 1.1e-07 60.8 52 63.5
Actinidia01827 Actinidia chinensis HOM05D002974 ORTHO05D002992 1.4e-07 60.5 131 39.7
CANSAT56G2792 Cannabis sativa HOM05D002974 ORTHO05D002992 1.4e-07 60.5 46 69.6
TAR623G1017 Trochodendron aralioides HOM05D002974 ORTHO05D002992 1.4e-07 60.5 139 40.3
Psat5g220360 Pisum sativum HOM05D002974 ORTHO05D002992 1.8e-07 60.1 131 38.2
Sed0000723 Sechium edule HOM05D002974 ORTHO05D002992 2.4e-07 59.7 52 65.4
PSO384G2085 Papaver somniferum HOM05D002974 ORTHO05D002992 3.1e-07 59.3 59 57.6
Duzib114G0524 Durio zibethinus HOM05D002974 ORTHO05D002992 4.0e-07 58.9 51 64.7
Gorai.012G018900 Gossypium raimondii HOM05D002974 ORTHO05D002992 4.0e-07 58.9 122 40.2
TAR633G1036 Trochodendron aralioides HOM05D002974 ORTHO05D002992 4.0e-07 58.9 119 39.5
unitig_26.g9507 Utricularia gibba HOM05D002974 ORTHO05D002992 5.3e-07 58.5 160 38.1
CSS0001226 Camellia sinensis var. sinensis HOM05D002974 ORTHO05D002992 6.9e-07 58.2 136 36.0
CSS0032574 Camellia sinensis var. sinensis HOM05D002974 ORTHO05D002992 6.9e-07 58.2 136 36.0
ECA234G2872 Erigeron canadensis HOM05D002974 ORTHO05D002992 6.9e-07 58.2 95 44.2
Glyma.13G193800 Glycine max HOM05D002974 ORTHO05D002992 6.9e-07 58.2 67 55.2
QL04p017793 Quercus lobata HOM05D002974 ORTHO05D002992 6.9e-07 58.2 88 44.3
THA.LOC109116532 Tarenaya hassleriana HOM05D002974 ORTHO05D002992 6.9e-07 58.2 130 41.5
AUR62032633 Chenopodium quinoa HOM05D012416 ORTHO05D002992 9.0e-07 57.8 166 31.9
DCAR_013643 Daucus carota HOM05D002974 ORTHO05D002992 1.5e-06 57.0 39 74.4
Gorai.011G217100 Gossypium raimondii HOM05D002974 ORTHO05D002992 1.5e-06 57.0 118 37.3
TPR.G22516 Trifolium pratense HOM05D002974 ORTHO05D002992 1.5e-06 57.0 55 54.5
Aqoxy2G00396 Aquilegia oxysepala HOM05D002974 ORTHO05D002992 2.0e-06 56.6 135 39.3
Haze_20227 Corylus avellana HOM05D002974 ORTHO05D002992 2.0e-06 56.6 53 64.2
Medtr8g040080 Medicago truncatula HOM05D002974 ORTHO05D002992 2.0e-06 56.6 52 57.7
Atru.chr12.1277 Acer truncatum HOM05D002974 ORTHO05D002992 2.6e-06 56.2 145 34.5
Duzib106G0159 Durio zibethinus HOM05D002974 ORTHO05D002992 2.6e-06 56.2 130 37.7
Gohir.D10G194600 Gossypium hirsutum HOM05D002974 ORTHO05D002992 2.6e-06 56.2 116 37.9
Ciclev10002803m.g Citrus clementina HOM05D002974 ORTHO05D002992 3.4e-06 55.8 139 34.5
Lalb_Chr06g0173671 Lupinus albus HOM05D002974 ORTHO05D002992 3.4e-06 55.8 45 64.4
DCAR_025326 Daucus carota HOM05D002974 ORTHO05D002992 4.5e-06 55.5 38 73.7
Glyma.03G127800 Glycine max HOM05D002974 ORTHO05D002992 4.5e-06 55.5 144 35.4
Gohir.A10G187100 Gossypium hirsutum HOM05D002974 ORTHO05D002992 4.5e-06 55.5 118 35.6
CSS0033077 Camellia sinensis var. sinensis HOM05D002974 ORTHO05D002992 5.8e-06 55.1 121 37.2
Oeu059346.1 Olea europaea HOM05D002974 ORTHO05D002992 5.8e-06 55.1 74 50.0
Ah.10g030130 Amaranthus hybridus HOM05D002974 ORTHO05D002992 7.6e-06 54.7 89 42.7
Dinv06180 Davidia involucrata HOM05D002974 ORTHO05D002992 7.6e-06 54.7 134 36.6
Thecc.10G149600 Theobroma cacao HOM05D002974 ORTHO05D002992 7.6e-06 54.7 152 30.3
VMungo1080G0254 Vigna mungo HOM05D002974 ORTHO05D002992 7.6e-06 54.7 55 56.4
Gohir.A05G399600 Gossypium hirsutum HOM05D002974 ORTHO05D002992 9.9e-06 54.3 122 36.9


User provided reference genes

Program Settings