Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc01g091790.2 Solanum lycopersicum HOM05D007580 ORTHO05D009620 7.7e-92 340.5 176 100.0
Sopen01g037570 Solanum pennellii HOM05D007580 ORTHO05D009620 2.1e-81 305.8 166 96.4
PGSC0003DMG400017056 Solanum tuberosum HOM05D007580 ORTHO05D009620 5.9e-68 261.2 170 84.1
Nitab4.5_0004550g0100 Nicotiana tabacum HOM05D007580 ORTHO05D009620 7.8e-44 181.0 190 63.7
Peaxi162Scf00021g00055 Petunia axillaris HOM05D007580 ORTHO05D009620 3.4e-39 165.6 179 60.3
Migut.B01687 Erythranthe guttata HOM05D007580 ORTHO05D009620 2.9e-38 162.5 179 57.5
QL08p050656 Quercus lobata HOM05D007580 ORTHO05D009620 2.9e-38 162.5 166 56.6
Nitab4.5_0010430g0050 Nicotiana tabacum HOM05D007580 ORTHO05D009620 3.7e-38 162.2 174 60.3
Potri.002G153000 Populus trichocarpa HOM05D007580 ORTHO05D009620 4.1e-37 158.7 163 57.7
Sabra02G0121300 Salix brachista HOM05D007580 ORTHO05D009620 1.0e-35 154.1 163 56.4
Hma1.2p1_0398F.1_g143830 Hydrangea macrophylla HOM05D007580 ORTHO05D009620 8.6e-35 151.0 184 54.3
Sabra14G0055200 Salix brachista HOM05D007580 ORTHO05D009620 8.6e-35 151.0 167 58.1
TWI14G1086 Tripterygium wilfordii HOM05D007580 ORTHO05D009620 4.3e-34 148.7 165 56.4
COL.COLO4_12626 Corchorus olitorius HOM05D007580 ORTHO05D009620 1.6e-33 146.7 170 52.4
FAN10G2444 Fragaria x ananassa HOM05D007580 ORTHO05D009620 3.6e-33 145.6 155 53.5
Aqoxy7G00453 Aquilegia oxysepala HOM05D007580 ORTHO05D009620 4.7e-33 145.2 171 51.5
FAN06G3292 Fragaria x ananassa HOM05D007580 ORTHO05D009620 4.7e-33 145.2 155 53.5
FAN06G5062 Fragaria x ananassa HOM05D007580 ORTHO05D009620 4.7e-33 145.2 155 53.5
Oeu024417.1 Olea europaea HOM05D007580 ORTHO05D009620 4.7e-33 145.2 188 54.3
Potri.014G077000 Populus trichocarpa HOM05D007580 ORTHO05D009620 6.2e-33 144.8 165 55.2
FAN03G2022 Fragaria x ananassa HOM05D007580 ORTHO05D009620 1.4e-32 143.7 157 52.9
Prupe.2G154500 Prunus persica HOM05D007580 ORTHO05D009620 1.4e-32 143.7 166 52.4
Medtr7g076270 Medicago truncatula HOM05D007580 ORTHO05D009620 1.8e-32 143.3 169 50.9
RcHm_v2.0_Chr1g0352211 Rosa chinensis HOM05D007580 ORTHO05D009620 4.0e-32 142.1 157 51.6
MD07G1128600 Malus domestica HOM05D007580 ORTHO05D009620 6.8e-32 141.4 165 52.1
TAR003G0002 Trochodendron aralioides HOM05D007580 ORTHO05D009620 6.8e-32 141.4 169 54.4
Haze_15227 Corylus avellana HOM05D007580 ORTHO05D009620 1.2e-31 140.6 180 51.7
Gohir.A08G129400 Gossypium hirsutum HOM05D007580 ORTHO05D009620 2.6e-31 139.4 170 54.1
Gorai.004G156400 Gossypium raimondii HOM05D007580 ORTHO05D009620 2.6e-31 139.4 167 53.9
TAR656G0002 Trochodendron aralioides HOM05D007580 ORTHO05D009620 2.6e-31 139.4 169 53.3
CARHR000490 Cardamine hirsuta HOM05D007580 ORTHO05D009620 3.4e-31 139.0 159 51.6
Gohir.D08G150700 Gossypium hirsutum HOM05D007580 ORTHO05D009620 3.4e-31 139.0 167 53.9
Duzib138G0841 Durio zibethinus HOM05D007580 ORTHO05D009620 4.4e-31 138.7 165 53.3
TPR.G37829 Trifolium pratense HOM05D007580 ORTHO05D009620 4.4e-31 138.7 158 49.4
Nn1g01349 Nelumbo nucifera HOM05D007580 ORTHO05D009620 5.8e-31 138.3 179 53.6
Manes.01G262404 Manihot esculenta HOM05D007580 ORTHO05D009620 7.6e-31 137.9 162 53.7
Duzib133G0099 Durio zibethinus HOM05D007580 ORTHO05D009620 1.3e-30 137.1 175 51.4
Cfa004181 Carpinus fangiana HOM05D007580 ORTHO05D009620 1.7e-30 136.7 180 50.6
CSS0034624 Camellia sinensis var. sinensis HOM05D007580 ORTHO05D009620 2.2e-30 136.3 169 50.3
FAN01G0874 Fragaria x ananassa HOM05D007580 ORTHO05D009620 2.2e-30 136.3 157 50.3
Thecc.01G368700 Theobroma cacao HOM05D007580 ORTHO05D009620 8.4e-30 134.4 174 51.7
Ciclev10023708m.g Citrus clementina HOM05D007580 ORTHO05D009620 3.2e-29 132.5 163 50.9
Thhalv10009990m.g Eutrema salsugineum HOM05D007580 ORTHO05D009620 3.2e-29 132.5 159 50.9
Manes.05G040200 Manihot esculenta HOM05D007580 ORTHO05D009620 9.2e-29 131.0 159 49.1
MELO3C022528.2 Cucumis melo HOM05D007580 ORTHO05D009620 1.2e-28 130.6 164 50.0
AT1G01840 Arabidopsis thaliana HOM05D007580 ORTHO05D009620 4.6e-28 128.6 162 51.2
Carub.0001s0037 Capsella rubella HOM05D007580 ORTHO05D009620 4.6e-28 128.6 160 50.0
BcaB03g13622 Brassica carinata HOM05D007580 ORTHO05D009620 7.8e-28 127.9 163 50.3
BolC5t28812H Brassica oleracea HOM05D007580 ORTHO05D009620 7.8e-28 127.9 163 50.3
CANSAT56G4452 Cannabis sativa HOM05D007580 ORTHO05D009620 1.0e-27 127.5 162 50.0
Sp1g00440 Schrenkiella parvula HOM05D007580 ORTHO05D009620 1.0e-27 127.5 163 47.9
A10p00190 Brassica napus HOM05D007580 ORTHO05D009620 1.3e-27 127.1 163 50.9
BraA10t42299Z Brassica rapa HOM05D007580 ORTHO05D009620 1.7e-27 126.7 162 49.4
TAR375G0300 Trochodendron aralioides HOM05D007580 ORTHO05D009620 1.7e-27 126.7 172 50.6
PSO782G0900 Papaver somniferum HOM05D007580 ORTHO05D009620 3.9e-27 125.6 183 47.5
PSO782G1514 Papaver somniferum HOM05D007580 ORTHO05D009620 5.1e-27 125.2 184 47.3
AL1G10480 Arabidopsis lyrata HOM05D007580 ORTHO05D009620 8.7e-27 124.4 157 51.6
Actinidia33444 Actinidia chinensis HOM05D007580 ORTHO05D009620 1.1e-26 124.0 159 50.3
GSVIVG01027528001 Vitis vinifera HOM05D007580 ORTHO05D009620 1.1e-26 124.0 163 47.9
CsaV3_6G005830 Cucumis sativus L. HOM05D007580 ORTHO05D009620 1.5e-26 123.6 172 47.1
Lalb_Chr01g0021151 Lupinus albus HOM05D007580 ORTHO05D009620 1.5e-26 123.6 170 49.4
PSO478G4117 Papaver somniferum HOM05D007580 ORTHO05D009620 9.6e-26 120.9 183 46.4
Psat0s1132g0080 Pisum sativum HOM05D007580 ORTHO05D009620 1.6e-25 120.2 176 43.2
Sed0005443 Sechium edule HOM05D007580 ORTHO05D009620 2.1e-25 119.8 160 48.1
Glyma.18G227800 Glycine max HOM05D007580 ORTHO05D009620 2.8e-25 119.4 164 48.2
DCAR_006906 Daucus carota HOM05D007580 ORTHO05D009620 1.1e-24 117.5 170 48.2
PGR031G3829 Punica granatum HOM05D007580 ORTHO05D009620 1.1e-24 117.5 165 44.8
ClCG06G000100 Citrullus lanatus HOM05D007580 ORTHO05D009620 1.4e-24 117.1 170 47.1
VMungo1383G0280 Vigna mungo HOM05D007580 ORTHO05D009620 1.4e-24 117.1 166 46.4
Aa31LG1G11200 Aethionema arabicum HOM05D007580 ORTHO05D009620 6.9e-24 114.8 165 45.5
CiPaw.01G053500 Carya illinoinensis HOM05D007580 ORTHO05D009620 6.9e-24 114.8 147 53.7
C05p00230 Brassica napus HOM05D007580 ORTHO05D009620 2.2e-22 109.8 161 46.0
THA.LOC104814091 Tarenaya hassleriana HOM05D007580 ORTHO05D009620 4.2e-21 105.5 158 46.8
Ca_07865_v3 Cicer arietinum L. HOM05D007580 ORTHO05D009620 5.4e-21 105.1 165 38.2
Lsat_1_v5_gn_7_8361 Lactuca sativa HOM05D007580 ORTHO05D009620 5.4e-21 105.1 179 44.1
CiPaw.01G052900 Carya illinoinensis HOM05D007580 ORTHO05D009620 7.1e-21 104.8 146 49.3
Rhsim01G0155700 Rhododendron simsii HOM05D007580 ORTHO05D009620 1.2e-20 104.0 168 43.5
Cpa.g.sc18.198 Carica papaya HOM05D007580 ORTHO05D009620 2.1e-20 103.2 141 52.5
SalBow3G0911 Salvia bowleyana HOM05D007580 ORTHO05D009620 7.8e-20 101.3 178 41.0
Lsat_1_v5_gn_7_8421 Lactuca sativa HOM05D007580 ORTHO05D009620 3.9e-19 99.0 167 43.1
Sc23g0003300 Simmondsia chinensis HOM05D007580 ORTHO05D009620 5.1e-19 98.6 159 44.0
Phvul.008G070400 Phaseolus vulgaris HOM05D007580 ORTHO05D009620 6.6e-19 98.2 151 45.0
Glyma.09G264200 Glycine max HOM05D007580 ORTHO05D009620 2.1e-17 93.2 99 51.5
Lj1g0023268 Lotus japonicus HOM05D007580 ORTHO05D009620 3.6e-17 92.4 164 40.2
SGA_v2.0_scaffold95G28871 Striga asiatica HOM05D007580 ORTHO05D009620 2.4e-16 89.7 173 41.6
HanXRQChr04g0121781 Helianthus annuus HOM05D007580 ORTHO05D009620 1.2e-15 87.4 156 38.5
MBI12_g06406_MAGBIO Magnolia biondii HOM05D007580 ORTHO05D009620 2.6e-15 86.3 158 39.2
MBI12_g45243_MAGBIO Magnolia biondii HOM05D007580 ORTHO05D009620 7.6e-15 84.7 158 39.2
ECA236G4638 Erigeron canadensis HOM05D007580 ORTHO05D009620 3.8e-14 82.4 181 38.1
Ah.05g176020 Amaranthus hybridus HOM05D007580 ORTHO05D009620 4.9e-14 82.0 160 36.9
Dinv32421 Davidia involucrata HOM05D007580 ORTHO05D009620 6.4e-14 81.6 119 42.9
vmacro20972 Vaccinium macrocarpon HOM05D007580 ORTHO05D009620 3.3e-10 69.3 127 40.9
AUR62033366 Chenopodium quinoa HOM05D007580 ORTHO05D009620 4.8e-09 65.5 111 44.1
AUR62026657 Chenopodium quinoa HOM05D007580 ORTHO05D009620 1.8e-08 63.5 141 39.0
FAN10G0406 Fragaria x ananassa HOM05D007580 ORTHO05D009620 4.5e-07 58.9 71 47.9


User provided reference genes

Program Settings