Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc01g091780.4 Solanum lycopersicum HOM05D006418 ORTHO05D008063 1.4e-206 722.6 347 100.0
Sopen01g037560 Solanum pennellii HOM05D006418 ORTHO05D008063 9.2e-198 693.3 334 99.4
PGSC0003DMG400017054 Solanum tuberosum HOM05D006418 ORTHO05D008063 2.3e-193 678.7 334 97.3
Nitab4.5_0010430g0060 Nicotiana tabacum HOM05D006418 ORTHO05D008063 3.3e-179 631.7 336 89.3
CAN.G170.50 Capsicum annuum HOM05D006418 ORTHO05D008063 2.4e-177 625.5 327 89.6
Nitab4.5_0004550g0130 Nicotiana tabacum HOM05D006418 ORTHO05D008063 2.4e-174 615.5 346 86.4
Peaxi162Scf00021g00525 Petunia axillaris HOM05D006418 ORTHO05D008063 3.3e-171 605.1 298 94.6
FvH4_7g13130 Fragaria vesca HOM05D006418 ORTHO05D008063 1.1e-158 563.5 326 80.7
FAN06G0540 Fragaria x ananassa HOM05D006418 ORTHO05D008063 1.1e-158 563.5 326 80.7
FAN06G3976 Fragaria x ananassa HOM05D006418 ORTHO05D008063 1.1e-158 563.5 326 80.7
Cc02_g37230 Coffea canephora HOM05D006418 ORTHO05D008063 5.5e-158 561.2 340 79.1
FAN03G2411 Fragaria x ananassa HOM05D006418 ORTHO05D008063 7.1e-158 560.8 326 80.4
FAN10G2923 Fragaria x ananassa HOM05D006418 ORTHO05D008063 7.1e-158 560.8 326 80.4
CANSAT56G2190 Cannabis sativa HOM05D006418 ORTHO05D008063 9.3e-158 560.5 332 78.6
CSS0035566 Camellia sinensis var. sinensis HOM05D006418 ORTHO05D008063 1.8e-156 556.2 328 80.5
Lj7A519G38 Lonicera japonica HOM05D006418 ORTHO05D008063 5.1e-156 554.7 300 85.7
FAN01G2003 Fragaria x ananassa HOM05D006418 ORTHO05D008063 8.7e-156 553.9 326 79.1
vmacro13338 Vaccinium macrocarpon HOM05D006418 ORTHO05D008063 1.5e-155 553.1 298 85.9
Duzib138G1515 Durio zibethinus HOM05D006418 ORTHO05D008063 2.5e-155 552.4 332 77.7
RcHm_v2.0_Chr1g0352261 Rosa chinensis HOM05D006418 ORTHO05D008063 2.5e-155 552.4 331 78.2
Rhsim07G0021100 Rhododendron simsii HOM05D006418 ORTHO05D008063 9.6e-155 550.4 335 77.9
TAR375G0873 Trochodendron aralioides HOM05D006418 ORTHO05D008063 1.6e-154 549.7 305 82.3
Actinidia38288 Actinidia chinensis HOM05D006418 ORTHO05D008063 2.8e-154 548.9 325 80.0
GSVIVG01027527001 Vitis vinifera HOM05D006418 ORTHO05D008063 4.8e-154 548.1 335 77.3
Migut.B01688 Erythranthe guttata HOM05D006418 ORTHO05D008063 1.4e-153 546.6 336 77.1
Nn1g01350 Nelumbo nucifera HOM05D006418 ORTHO05D008063 1.4e-153 546.6 305 81.6
TWI59G1449 Tripterygium wilfordii HOM05D006418 ORTHO05D008063 1.4e-153 546.6 302 84.1
MD07G1128500 Malus domestica HOM05D006418 ORTHO05D008063 1.8e-153 546.2 333 76.9
COL.COLO4_12625 Corchorus olitorius HOM05D006418 ORTHO05D008063 2.4e-153 545.8 333 76.9
HanXRQChr06g0169031 Helianthus annuus HOM05D006418 ORTHO05D008063 2.4e-153 545.8 332 76.5
Hund27325 Selenicereus undatus HOM05D006418 ORTHO05D008063 6.9e-153 544.3 336 76.8
Dinv32422 Davidia involucrata HOM05D006418 ORTHO05D008063 9.0e-153 543.9 295 84.7
Ciclev10021113m.g Citrus clementina HOM05D006418 ORTHO05D008063 1.2e-152 543.5 334 76.0
Aqoxy5G03975 Aquilegia oxysepala HOM05D006418 ORTHO05D008063 1.5e-152 543.1 303 81.2
CiPaw.01G053600 Carya illinoinensis HOM05D006418 ORTHO05D008063 1.5e-152 543.1 332 77.4
Gorai.007G095100 Gossypium raimondii HOM05D006418 ORTHO05D008063 2.6e-152 542.3 332 75.9
Glyma.03G017600 Glycine max HOM05D006418 ORTHO05D008063 7.6e-152 540.8 335 76.7
Hma1.2p1_0033F.1_g020630 Hydrangea macrophylla HOM05D006418 ORTHO05D008063 1.0e-151 540.4 295 84.1
EL10Ac1g00963 Beta vulgaris HOM05D006418 ORTHO05D008063 1.3e-151 540.0 336 76.2
Gohir.D11G089100 Gossypium hirsutum HOM05D006418 ORTHO05D008063 2.2e-151 539.3 332 75.6
arahy.Tifrunner.gnm1.ann1.K1NG1D Arachis hypogaea HOM05D006418 ORTHO05D008063 6.5e-151 537.7 334 77.2
THA.LOC104827683 Tarenaya hassleriana HOM05D006418 ORTHO05D008063 6.5e-151 537.7 334 76.0
ClCG05G001910 Citrullus lanatus HOM05D006418 ORTHO05D008063 1.9e-150 536.2 318 78.6
ECA236G1148 Erigeron canadensis HOM05D006418 ORTHO05D008063 3.2e-150 535.4 300 81.0
Potri.002G153100 Populus trichocarpa HOM05D006418 ORTHO05D008063 3.2e-150 535.4 307 80.5
Lj3g0006580 Lotus japonicus HOM05D006418 ORTHO05D008063 7.1e-150 534.3 326 76.7
DCAR_025170 Daucus carota HOM05D006418 ORTHO05D008063 9.3e-150 533.9 303 82.2
Eucgr.E00217 Eucalyptus grandis HOM05D006418 ORTHO05D008063 1.2e-149 533.5 334 75.1
Lalb_Chr10g0097531 Lupinus albus HOM05D006418 ORTHO05D008063 2.1e-149 532.7 319 77.7
Sabra02G0121400 Salix brachista HOM05D006418 ORTHO05D008063 1.3e-148 530.0 307 79.5
TPR.G17586 Trifolium pratense HOM05D006418 ORTHO05D008063 1.8e-148 529.6 310 79.7
CARHR171390 Cardamine hirsuta HOM05D006418 ORTHO05D008063 2.3e-148 529.3 334 76.6
Cfa004182 Carpinus fangiana HOM05D006418 ORTHO05D008063 5.1e-148 528.1 295 82.4
PGR042G1311 Punica granatum HOM05D006418 ORTHO05D008063 2.5e-147 525.8 327 77.1
VMungo0331G0376 Vigna mungo HOM05D006418 ORTHO05D008063 7.4e-147 524.2 330 75.2
PSO063G7157 Papaver somniferum HOM05D006418 ORTHO05D008063 9.7e-147 523.9 329 75.1
Aa31LG10G15180 Aethionema arabicum HOM05D006418 ORTHO05D008063 1.3e-146 523.5 334 74.6
Carub.0005s2773 Capsella rubella HOM05D006418 ORTHO05D008063 4.8e-146 521.5 334 74.6
Thhalv10006098m.g Eutrema salsugineum HOM05D006418 ORTHO05D008063 4.8e-146 521.5 334 74.9
Medtr8g032700 Medicago truncatula HOM05D006418 ORTHO05D008063 8.2e-146 520.8 330 75.2
CiPaw.01G023800 Carya illinoinensis HOM05D006418 ORTHO05D008063 1.8e-145 519.6 334 74.0
Ca_23755_v3 Cicer arietinum L. HOM05D006418 ORTHO05D008063 3.1e-145 518.8 326 75.2
AL5G43290 Arabidopsis lyrata HOM05D006418 ORTHO05D008063 4.1e-145 518.5 334 73.7
AT3G61080 Arabidopsis thaliana HOM05D006418 ORTHO05D008063 9.0e-145 517.3 308 76.9
Os03g0117800 Oryza sativa ssp. japonica HOM05D006418 ORTHO05D008063 1.5e-144 516.5 299 77.9
Phvul.010G092700 Phaseolus vulgaris HOM05D006418 ORTHO05D008063 2.0e-144 516.2 330 73.6
Sp5g02280 Schrenkiella parvula HOM05D006418 ORTHO05D008063 2.0e-144 516.2 338 72.8
Zm00001eb001200 Zea mays HOM05D006418 ORTHO05D008063 2.6e-144 515.8 299 78.6
MELO3C006151.2 Cucumis melo HOM05D006418 ORTHO05D008063 3.8e-143 511.9 360 69.7
ATR0757G200 Amborella trichopoda HOM05D006418 ORTHO05D008063 1.1e-142 510.4 323 74.3
BcaB02g07390 Brassica carinata HOM05D006418 ORTHO05D008063 2.5e-142 509.2 304 77.3
SalBow3G2367 Salvia bowleyana HOM05D006418 ORTHO05D008063 1.2e-141 506.9 320 74.4
BcaC08g45098 Brassica carinata HOM05D006418 ORTHO05D008063 2.7e-141 505.8 322 74.5
A07p25300 Brassica napus HOM05D006418 ORTHO05D008063 2.5e-139 499.2 339 71.4
C06p27060 Brassica napus HOM05D006418 ORTHO05D008063 3.3e-139 498.8 329 72.9
BolC6t37878H Brassica oleracea HOM05D006418 ORTHO05D008063 3.3e-139 498.8 329 72.9
BraA07t30173Z Brassica rapa HOM05D006418 ORTHO05D008063 4.3e-139 498.4 339 71.1
HPP92_014577 Vanilla planifolia HOM05D006418 ORTHO05D008063 9.7e-139 497.3 303 74.9
SGA_v2.0_scaffold95G28870 Striga asiatica HOM05D006418 ORTHO05D008063 1.3e-127 460.3 352 65.9
Manes.01G262400 Manihot esculenta HOM05D006418 ORTHO05D008063 5.0e-127 458.4 286 75.2
Oeu024416.1 Olea europaea HOM05D006418 ORTHO05D008063 5.5e-126 454.9 295 74.6
Thecc.01G368600 Theobroma cacao HOM05D006418 ORTHO05D008063 7.2e-126 454.5 289 73.7
CDE01G0065 Ceratophyllum demersum HOM05D006418 ORTHO05D008063 6.1e-125 451.4 266 77.1
Atru.chr5.403 Acer truncatum HOM05D006418 ORTHO05D008063 1.4e-124 450.3 272 77.9
AUR62004291 Chenopodium quinoa HOM05D006418 ORTHO05D008063 2.0e-123 446.4 252 80.6
Lsat_1_v5_gn_7_8501 Lactuca sativa HOM05D006418 ORTHO05D008063 3.1e-121 439.1 263 77.6
Psat4g151800 Pisum sativum HOM05D006418 ORTHO05D008063 1.6e-120 436.8 260 76.2
Prupe.2G154600 Prunus persica HOM05D006418 ORTHO05D008063 1.6e-120 436.8 241 81.3
AagrBONN_evm.TU.Sc2ySwM_344.2134 Anthoceros agrestis HOM05D006418 ORTHO05D008063 5.9e-120 434.9 293 67.9
Mapoly0138s0005 Marchantia polymorpha HOM05D006418 ORTHO05D008063 7.7e-120 434.5 292 68.5
CsaV3_3G009310 Cucumis sativus L. HOM05D006418 ORTHO05D008063 6.5e-119 431.4 241 81.3
Pp3c15_5030 Physcomitrium patens HOM05D006418 ORTHO05D008063 2.7e-117 426.0 326 62.9
Sed0024588 Sechium edule HOM05D006418 ORTHO05D008063 1.2e-115 420.6 241 79.3
CBR_g38943 Chara braunii HOM05D006418 ORTHO05D008063 9.7e-115 417.5 292 65.1
QL08p050652 Quercus lobata HOM05D006418 ORTHO05D008063 9.7e-115 417.5 261 77.4
SMO356G0133 Selaginella moellendorffii HOM05D006418 ORTHO05D008063 3.8e-111 405.6 291 63.9
Cpa.g.sc18.197 Carica papaya HOM05D006418 ORTHO05D008063 6.8e-108 394.8 252 74.6
Cc02_g37660 Coffea canephora HOM05D006418 ORTHO05D008063 6.3e-98 361.7 208 79.8
unitig_22.g5367 Utricularia gibba HOM05D006418 ORTHO05D008063 7.0e-97 358.2 204 77.5
Gohir.A11G085000 Gossypium hirsutum HOM05D006418 ORTHO05D008063 1.2e-91 340.9 182 80.8
MBI12_g25033_MAGBIO Magnolia biondii HOM05D006418 ORTHO05D008063 1.2e-91 340.9 255 66.7
Hma1.2p1_0033F.1_g020640 Hydrangea macrophylla HOM05D006418 ORTHO05D008063 1.2e-88 330.9 240 69.2
SEGI_14549 Sequoiadendron giganteum HOM05D006418 ORTHO05D008063 3.3e-70 269.6 170 72.4
Cre12.g542202 Chlamydomonas reinhardtii HOM05D006418 ORTHO05D008063 2.8e-69 266.5 297 47.5
MCO14G366 Micromonas commoda HOM05D006418 ORTHO05D008063 4.7e-69 265.8 297 48.1
Sc26g0001060 Simmondsia chinensis HOM05D001335 ORTHO05D001184 4.9e-66 255.8 184 68.5
FAN10G0301 Fragaria x ananassa HOM05D006418 ORTHO05D008063 7.8e-64 248.4 195 64.6
arahy.Tifrunner.gnm1.ann1.N7AMXP Arachis hypogaea HOM05D006418 ORTHO05D008063 2.1e-61 240.4 173 72.8
Haze_15226 Corylus avellana HOM05D006418 ORTHO05D008063 9.0e-60 235.0 138 82.6
PRCOL_00000121 Prasinoderma coloniale HOM05D006418 ORTHO05D008063 1.7e-58 230.7 311 42.4
Glyma.07G078900 Glycine max HOM05D006418 ORTHO05D008063 2.4e-44 183.7 187 57.2
Pp3c1_6480 Physcomitrium patens HOM05D006418 ORTHO05D008063 5.3e-44 182.6 277 37.9
Gohir.A11G084900 Gossypium hirsutum HOM05D006418 ORTHO05D008063 1.2e-43 181.4 132 68.9
Sc26g0001070 Simmondsia chinensis HOM05D006418 ORTHO05D008063 1.2e-43 181.4 136 69.1
Sabra14G0055300 Salix brachista HOM05D006418 ORTHO05D008063 4.5e-43 179.5 287 40.1
Ca_28970_v3 Cicer arietinum L. HOM05D006418 ORTHO05D008063 4.5e-35 152.9 315 34.9
ATR0620G127 Amborella trichopoda HOM05D006418 ORTHO05D008063 1.2e-27 128.3 157 42.7
Cfa024407 Carpinus fangiana HOM05D006418 ORTHO05D008063 1.2e-27 128.3 277 32.5
unitig_22.g5366 Utricularia gibba HOM05D003447 ORTHO05D003967 1.2e-24 118.2 102 61.8
CiPaw.01G052800 Carya illinoinensis HOM05D006418 ORTHO05D008063 3.4e-19 100.1 86 60.5
Cc00_g22860 Coffea canephora HOM05D006418 ORTHO05D008063 7.2e-17 92.4 57 77.2
SEGI_36912 Sequoiadendron giganteum HOM05D006418 ORTHO05D008063 5.3e-12 76.3 92 47.8
Actinidia27830 Actinidia chinensis HOM05D006418 ORTHO05D008063 4.5e-11 73.2 41 75.6
MBI16_g15528_MAGBIO Magnolia biondii HOM05D006418 ORTHO05D008063 3.2e-09 67.0 42 71.4
Peaxi162Scf00786g00028 Petunia axillaris HOM05D014441 ORTHO05D016353 8.8e-07 58.9 30 83.3


User provided reference genes

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