Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc01g091510.4 Solanum lycopersicum HOM05D006822 ORTHO05D008884 0.0e+00 1248.0 716 100.0
Sopen01g037280 Solanum pennellii HOM05D006822 ORTHO05D008884 0.0e+00 1183.3 695 97.8
PGSC0003DMG401012750 Solanum tuberosum HOM05D006822 ORTHO05D008884 0.0e+00 1129.0 697 93.4
CAN.G170.5 Capsicum annuum HOM05D006822 ORTHO05D008884 5.6e-290 1000.7 689 84.8
Nitab4.5_0004320g0040 Nicotiana tabacum HOM05D006822 ORTHO05D008884 2.7e-284 981.9 688 80.1
Nitab4.5_0013912g0010 Nicotiana tabacum HOM05D006822 ORTHO05D008884 3.1e-264 915.2 675 79.1
Peaxi162Scf00021g01312 Petunia axillaris HOM05D006822 ORTHO05D008884 3.9e-259 898.3 751 69.0
Dinv32391 Davidia involucrata HOM05D004001 ORTHO05D004559 8.8e-195 684.5 665 63.8
Rhsim07G0025500 Rhododendron simsii HOM05D006822 ORTHO05D008884 7.5e-194 681.4 678 59.9
vmacro13383 Vaccinium macrocarpon HOM05D006822 ORTHO05D008884 2.9e-190 669.5 710 56.2
CSS0016394 Camellia sinensis var. sinensis HOM05D006822 ORTHO05D008884 6.8e-187 658.3 676 61.5
Cc02_g36520 Coffea canephora HOM05D006822 ORTHO05D008884 3.4e-186 656.0 708 61.6
Oeu003493.1 Olea europaea HOM05D006822 ORTHO05D008884 3.1e-184 649.4 685 59.1
Lj7A526T89 Lonicera japonica HOM05D006822 ORTHO05D008884 2.7e-183 646.4 695 60.4
Hma1.2p1_0053F.1_g030830 Hydrangea macrophylla HOM05D006822 ORTHO05D008884 6.6e-182 641.7 679 56.0
GSVIVG01027532001 Vitis vinifera HOM05D006822 ORTHO05D008884 1.8e-179 633.6 681 59.0
CiPaw.01G260400 Carya illinoinensis HOM05D006822 ORTHO05D008884 6.8e-179 631.7 697 54.4
Migut.B01651 Erythranthe guttata HOM05D006822 ORTHO05D008884 8.9e-179 631.3 701 57.3
TAR375G1023 Trochodendron aralioides HOM05D006822 ORTHO05D008884 5.7e-178 628.6 686 57.0
Manes.01G264800 Manihot esculenta HOM05D006822 ORTHO05D008884 1.7e-177 627.1 677 57.0
SGA_v2.0_scaffold95G28889 Striga asiatica HOM05D006822 ORTHO05D008884 5.4e-176 622.1 696 57.2
Haze_16833 Corylus avellana HOM05D006822 ORTHO05D008884 1.6e-175 620.5 707 56.2
HanXRQChr04g0122211 Helianthus annuus HOM05D006822 ORTHO05D008884 3.9e-174 615.9 691 57.0
Cfa001701 Carpinus fangiana HOM05D006822 ORTHO05D008884 1.5e-173 614.0 697 55.8
Thecc.01G374100 Theobroma cacao HOM05D006822 ORTHO05D008884 9.5e-173 611.3 679 57.4
Potri.002G149800 Populus trichocarpa HOM05D006822 ORTHO05D008884 8.9e-171 604.7 678 56.2
Cpa.g.sc18.138 Carica papaya HOM05D006822 ORTHO05D008884 4.4e-170 602.4 697 53.1
Gohir.A08G031700 Gossypium hirsutum HOM05D006822 ORTHO05D008884 6.4e-169 598.6 686 59.0
Atru.chr5.328 Acer truncatum HOM05D006822 ORTHO05D008884 8.3e-169 598.2 675 56.1
Ciclev10019178m.g Citrus clementina HOM05D006822 ORTHO05D008884 8.3e-169 598.2 678 55.6
CANSAT56G1004 Cannabis sativa HOM05D006822 ORTHO05D008884 2.4e-168 596.7 682 57.5
Gohir.D08G042800 Gossypium hirsutum HOM05D006822 ORTHO05D008884 3.2e-168 596.3 682 59.1
Gorai.004G041400 Gossypium raimondii HOM05D006822 ORTHO05D008884 3.2e-168 596.3 684 59.6
Aqoxy7G00564 Aquilegia oxysepala HOM05D006822 ORTHO05D008884 3.5e-167 592.8 671 54.7
Duzib133G0703 Durio zibethinus HOM05D006822 ORTHO05D008884 1.3e-166 590.9 681 57.4
QL08p051944 Quercus lobata HOM05D006822 ORTHO05D008884 1.7e-166 590.5 694 59.4
CsaV3_3G009540 Cucumis sativus L. HOM05D006822 ORTHO05D008884 5.0e-166 589.0 677 57.6
MELO3C006175.2 Cucumis melo HOM05D006822 ORTHO05D008884 5.6e-165 585.5 677 57.2
Glyma.09G267800 Glycine max HOM05D006822 ORTHO05D008884 1.6e-164 583.9 706 51.7
PSO478G2587 Papaver somniferum HOM05D006822 ORTHO05D008884 2.8e-164 583.2 695 53.1
Hund27354 Selenicereus undatus HOM05D006822 ORTHO05D008884 6.2e-164 582.0 692 53.8
Eucgr.D02443 Eucalyptus grandis HOM05D006822 ORTHO05D008884 1.5e-162 577.4 683 58.1
Hma1.2p1_0053F.1_g030820 Hydrangea macrophylla HOM05D006822 ORTHO05D008884 1.5e-162 577.4 535 57.9
ClCG05G002100 Citrullus lanatus HOM05D006822 ORTHO05D008884 5.8e-162 575.5 676 56.4
Lsat_1_v5_gn_7_7481 Lactuca sativa HOM05D006822 ORTHO05D008884 9.8e-162 574.7 678 55.3
Ah.05g175170 Amaranthus hybridus HOM05D006822 ORTHO05D008884 3.7e-161 572.8 689 55.3
Lj1g0013249 Lotus japonicus HOM05D006822 ORTHO05D008884 8.3e-161 571.6 687 53.6
Sabra02G0118500 Salix brachista HOM05D006822 ORTHO05D008884 2.4e-160 570.1 670 53.3
COL.COLO4_12575 Corchorus olitorius HOM05D006822 ORTHO05D008884 4.1e-160 569.3 671 55.1
Glyma.18G222100 Glycine max HOM05D006822 ORTHO05D008884 4.1e-160 569.3 697 51.4
VMungo1383G2566 Vigna mungo HOM05D006822 ORTHO05D008884 7.8e-159 565.1 681 51.4
MD02G1201200 Malus domestica HOM05D006822 ORTHO05D008884 1.0e-158 564.7 702 50.7
Phvul.008G075100 Phaseolus vulgaris HOM05D006822 ORTHO05D008884 1.7e-158 563.9 700 50.4
Lalb_Chr01g0021331 Lupinus albus HOM05D006822 ORTHO05D008884 3.0e-158 563.1 683 48.5
EL10Ac1g00937 Beta vulgaris HOM05D006822 ORTHO05D008884 8.6e-158 561.6 684 53.1
TWI14G1233 Tripterygium wilfordii HOM05D006822 ORTHO05D008884 4.3e-157 559.3 676 57.2
Ca_07832_v3 Cicer arietinum L. HOM05D006822 ORTHO05D008884 2.8e-156 556.6 682 51.2
AUR62013615 Chenopodium quinoa HOM05D006822 ORTHO05D008884 6.8e-155 552.0 680 50.9
Sc23g0003500 Simmondsia chinensis HOM05D006822 ORTHO05D008884 8.9e-155 551.6 728 50.0
PGR031G1001 Punica granatum HOM05D006822 ORTHO05D008884 2.6e-154 550.1 670 56.0
Sed0020963 Sechium edule HOM05D006822 ORTHO05D008884 2.9e-153 546.6 688 53.8
MBI04_g46545_MAGBIO Magnolia biondii HOM05D006822 ORTHO05D008884 4.9e-153 545.8 571 60.1
arahy.Tifrunner.gnm1.ann1.K16L32 Arachis hypogaea HOM05D006822 ORTHO05D008884 1.1e-152 544.7 708 53.5
Actinidia31423 Actinidia chinensis HOM05D006822 ORTHO05D008884 3.2e-152 543.1 697 49.1
arahy.Tifrunner.gnm1.ann1.485MU0 Arachis hypogaea HOM05D006822 ORTHO05D008884 1.6e-151 540.8 709 50.8
Medtr7g075170 Medicago truncatula HOM05D006822 ORTHO05D008884 1.1e-149 534.6 677 53.3
AUR62004233 Chenopodium quinoa HOM05D006822 ORTHO05D008884 9.6e-149 531.6 679 50.1
TPR.G26925 Trifolium pratense HOM05D006822 ORTHO05D008884 1.1e-147 528.1 677 53.2
Psat3g115280 Pisum sativum HOM05D006822 ORTHO05D008884 3.1e-147 526.6 684 52.9
Prupe.2G147600 Prunus persica HOM05D006822 ORTHO05D008884 2.2e-145 520.4 548 54.6
Nn1g01174 Nelumbo nucifera HOM05D006822 ORTHO05D008884 1.9e-144 517.3 586 53.6
HPP92_015074 Vanilla planifolia HOM05D006822 ORTHO05D008884 2.4e-144 516.9 695 47.2
FAN01G0942 Fragaria x ananassa HOM05D006822 ORTHO05D008884 4.6e-143 512.7 652 53.8
RcHm_v2.0_Chr1g0350861 Rosa chinensis HOM05D006822 ORTHO05D008884 8.7e-142 508.4 525 55.2
FvH4_7g12110 Fragaria vesca HOM05D006822 ORTHO05D008884 5.6e-141 505.8 549 54.5
FAN06G2864 Fragaria x ananassa HOM05D006822 ORTHO05D008884 5.6e-141 505.8 549 54.6
unitig_22.g5376 Utricularia gibba HOM05D006822 ORTHO05D008884 8.1e-140 501.9 689 49.2
Os04g0574600 Oryza sativa ssp. japonica HOM05D006822 ORTHO05D008884 6.9e-139 498.8 694 50.0
THA.LOC104817014 Tarenaya hassleriana HOM05D006822 ORTHO05D008884 3.8e-137 493.0 667 49.6
CSS0048598 Camellia sinensis var. sinensis HOM05D006822 ORTHO05D008884 4.6e-135 486.1 578 57.4
Aa31LG1G11250 Aethionema arabicum HOM05D006822 ORTHO05D008884 7.9e-135 485.3 723 46.6
Lsat_1_v5_gn_3_133341 Lactuca sativa HOM05D006822 ORTHO05D008884 1.3e-134 484.6 553 49.9
ECA236G3401 Erigeron canadensis HOM05D006822 ORTHO05D008884 7.4e-133 478.8 446 57.8
Zm00001eb073430 Zea mays HOM05D006822 ORTHO05D008884 2.1e-132 477.2 696 48.4
CDE11G0821 Ceratophyllum demersum HOM05D006822 ORTHO05D008884 1.3e-129 468.0 653 46.6
AT1G01930 Arabidopsis thaliana HOM05D006822 ORTHO05D008884 1.4e-128 464.5 543 49.5
Thhalv10007219m.g Eutrema salsugineum HOM05D006822 ORTHO05D008884 3.2e-128 463.4 541 49.9
AL1G10390 Arabidopsis lyrata HOM05D006822 ORTHO05D008884 6.0e-127 459.1 531 50.1
Sp1g00370 Schrenkiella parvula HOM05D006822 ORTHO05D008884 2.3e-126 457.2 546 47.8
HanXRQChr13g0425441 Helianthus annuus HOM05D006822 ORTHO05D008884 1.6e-124 451.1 548 47.6
Carub.0001s0031 Capsella rubella HOM05D006822 ORTHO05D008884 1.8e-123 447.6 522 48.1
SEGI_38546 Sequoiadendron giganteum HOM05D006822 ORTHO05D008884 8.4e-121 438.7 693 43.7
Eucgr.L02337 Eucalyptus grandis HOM05D006822 ORTHO05D008884 7.1e-120 435.6 599 54.1
Medtr7g075185 Medicago truncatula HOM05D006822 ORTHO05D008884 1.8e-118 431.0 520 47.5
C08p53940 Brassica napus HOM05D006822 ORTHO05D008884 3.9e-118 429.9 515 48.9
BolC8t52907H Brassica oleracea HOM05D006822 ORTHO05D008884 3.9e-118 429.9 515 48.9
BraA09t42269Z Brassica rapa HOM05D006822 ORTHO05D008884 3.3e-117 426.8 515 48.3
ECA240G3107 Erigeron canadensis HOM05D006822 ORTHO05D008884 2.0e-106 391.0 475 50.1
FAN03G3111 Fragaria x ananassa HOM05D006822 ORTHO05D008884 7.2e-104 382.5 523 46.7
ATR0757G063 Amborella trichopoda HOM05D006822 ORTHO05D008884 2.0e-98 364.4 381 51.4
COL.COLO4_05508 Corchorus olitorius HOM05D006822 ORTHO05D008884 1.8e-91 341.3 375 49.3
Mapoly0008s0196 Marchantia polymorpha HOM05D006822 ORTHO05D008884 7.2e-88 329.3 693 42.0
AagrBONN_evm.TU.Sc2ySwM_117.565 Anthoceros agrestis HOM05D006822 ORTHO05D008884 1.2e-87 328.6 637 38.3
Pp3c3_38070 Physcomitrium patens HOM05D006822 ORTHO05D008884 3.0e-86 323.9 529 39.7
CARHR000420 Cardamine hirsuta HOM05D006822 ORTHO05D008884 4.1e-67 260.4 328 49.1
FAN10G0810 Fragaria x ananassa HOM05D006822 ORTHO05D008884 1.4e-62 245.4 526 35.7
CARHR000430 Cardamine hirsuta HOM05D006822 ORTHO05D008884 8.6e-57 226.1 233 51.5
Cre07.g325715 Chlamydomonas reinhardtii HOM05D006822 ORTHO05D008884 9.8e-53 212.6 480 34.0
SEGI_35234 Sequoiadendron giganteum HOM05D006822 ORTHO05D008884 1.2e-42 179.1 231 45.9
PRCOL_00005597 Prasinoderma coloniale HOM05D006822 ORTHO05D008884 2.3e-33 148.3 306 35.0
Cfa022202 Carpinus fangiana HOM05D006822 ORTHO05D004559 8.1e-31 139.8 577 27.2
Medtr7g075430 Medicago truncatula HOM05D006822 ORTHO05D008884 9.9e-21 106.3 168 42.9
ATR0757G024 Amborella trichopoda HOM05D006822 ORTHO05D004559 6.2e-15 87.0 188 63.8
arahy.Tifrunner.gnm1.ann1.EYK22X Arachis hypogaea HOM05D006822 ORTHO05D008884 2.3e-09 68.6 51 60.8
Medtr7g075450 Medicago truncatula HOM05D006822 ORTHO05D008884 4.8e-07 60.8 100 39.0
CsaV3_4G032230 Cucumis sativus L. HOM05D006822 ORTHO05D008884 6.2e-07 60.5 101 37.6


User provided reference genes

Program Settings