Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc01g091490.3 Solanum lycopersicum HOM05D003683 ORTHO05D004143 3.2e-54 214.9 114 100.0
PGSC0003DMG400012753 Solanum tuberosum HOM05D003683 ORTHO05D004143 2.4e-46 188.7 113 88.5
Peaxi162Scf00021g00139 Petunia axillaris HOM05D003683 ORTHO05D004143 3.9e-28 128.3 110 69.1
Nitab4.5_0011654g0010 Nicotiana tabacum HOM05D003683 ORTHO05D004143 7.3e-19 97.4 111 58.6
Dinv32390 Davidia involucrata HOM05D003683 ORTHO05D004143 2.4e-14 82.4 89 57.3
Dinv43725 Davidia involucrata HOM05D003683 ORTHO05D004143 1.3e-12 76.6 111 49.5
Hma1.2p1_3528F.1_g336600 Hydrangea macrophylla HOM05D003683 ORTHO05D004143 1.5e-11 73.2 101 48.5
Cfa001703 Carpinus fangiana HOM05D003683 ORTHO05D004143 2.5e-11 72.4 104 48.1
Hma1.2p1_1793F.1_g302590 Hydrangea macrophylla HOM05D003683 ORTHO05D004143 1.1e-09 67.0 76 55.3
Glyma.03G022200 Glycine max HOM05D003683 ORTHO05D004143 2.4e-09 65.9 104 46.2
CiPaw.01G260700 Carya illinoinensis HOM05D003683 ORTHO05D004143 4.0e-09 65.1 81 50.6
Potri.014G071200 Populus trichocarpa HOM05D003683 ORTHO05D004143 4.0e-09 65.1 88 52.3
Duzib133G0707 Durio zibethinus HOM05D003683 ORTHO05D004143 1.5e-08 63.2 86 48.8
Thecc.01G374500 Theobroma cacao HOM05D003683 ORTHO05D004143 2.0e-08 62.8 111 40.5
CAN.G630.45 Capsicum annuum HOM05D003683 ORTHO05D004143 2.6e-08 62.4 107 39.3
Duzib138G1197 Durio zibethinus HOM05D003683 ORTHO05D004143 2.6e-08 62.4 91 44.0
Lsat_1_v5_gn_4_37980 Lactuca sativa HOM05D003683 ORTHO05D004143 2.6e-08 62.4 81 48.1
Lalb_Chr03g0039121 Lupinus albus HOM05D003683 ORTHO05D004143 2.6e-08 62.4 102 42.2
Medtr7g075120 Medicago truncatula HOM05D003683 ORTHO05D004143 2.6e-08 62.4 89 42.7
Phvul.010G085600 Phaseolus vulgaris HOM05D003683 ORTHO05D004143 2.6e-08 62.4 53 64.2
Potri.002G149600 Populus trichocarpa HOM05D003683 ORTHO05D004143 4.5e-08 61.6 88 46.6
CiPaw.02G166400 Carya illinoinensis HOM05D003683 ORTHO05D004143 5.8e-08 61.2 83 45.8
COL.COLO4_12571 Corchorus olitorius HOM05D003683 ORTHO05D004143 9.9e-08 60.5 91 45.1
Gohir.A11G081600 Gossypium hirsutum HOM05D003683 ORTHO05D004143 1.7e-07 59.7 88 46.6
Dinv39058 Davidia involucrata HOM05D003683 ORTHO05D004143 2.2e-07 59.3 106 40.6
Sed0003331 Sechium edule HOM05D003683 ORTHO05D004143 2.2e-07 59.3 101 44.6
Cfa012041 Carpinus fangiana HOM05D003683 ORTHO05D004143 3.8e-07 58.5 101 42.6
Glyma.18G221800 Glycine max HOM05D003683 ORTHO05D004143 3.8e-07 58.5 79 46.8
TWI23G1078 Tripterygium wilfordii HOM05D003683 ORTHO05D004143 3.8e-07 58.5 84 42.9
Actinidia14483 Actinidia chinensis HOM05D003683 ORTHO05D004143 4.9e-07 58.2 106 40.6
Haze_09035 Corylus avellana HOM05D003683 ORTHO05D004143 4.9e-07 58.2 101 43.6
Gohir.D11G086200 Gossypium hirsutum HOM05D003683 ORTHO05D004143 6.4e-07 57.8 78 47.4
HanXRQChr16g0521651 Helianthus annuus HOM05D003683 ORTHO05D004143 6.4e-07 57.8 90 44.4
Oeu064712.1 Olea europaea HOM05D003683 ORTHO05D004143 6.4e-07 57.8 69 49.3
BcaB02g08997 Brassica carinata HOM05D003683 ORTHO05D004143 8.4e-07 57.4 82 48.8
BcaC02g12206 Brassica carinata HOM05D003683 ORTHO05D004143 8.4e-07 57.4 68 50.0
A05p05480 Brassica napus HOM05D003683 ORTHO05D004143 8.4e-07 57.4 68 50.0
C04p06420 Brassica napus HOM05D003683 ORTHO05D004143 8.4e-07 57.4 68 50.0
BolC4t22265H Brassica oleracea HOM05D003683 ORTHO05D004143 8.4e-07 57.4 68 50.0
BraA05t19518Z Brassica rapa HOM05D003683 ORTHO05D004143 8.4e-07 57.4 68 50.0
Glyma.09G268100 Glycine max HOM05D003683 ORTHO05D004143 8.4e-07 57.4 66 48.5
Lj2A204T52 Lonicera japonica HOM05D003683 ORTHO05D004143 8.4e-07 57.4 107 38.3
Lj3g0025203 Lotus japonicus HOM05D003683 ORTHO05D004143 1.1e-06 57.0 112 42.0
Nn4g26435 Nelumbo nucifera HOM05D003683 ORTHO05D004143 1.1e-06 57.0 79 44.3
RcHm_v2.0_Chr1g0350821 Rosa chinensis HOM05D003683 ORTHO05D004143 1.1e-06 57.0 90 45.6
TWI60G0451 Tripterygium wilfordii HOM05D003683 ORTHO05D004143 1.1e-06 57.0 101 43.6
vmacro00217 Vaccinium macrocarpon HOM05D003683 ORTHO05D004143 1.1e-06 57.0 83 43.4
Dinv37740 Davidia involucrata HOM05D003683 ORTHO05D004143 1.4e-06 56.6 84 46.4
Cc02_g36550 Coffea canephora HOM05D003683 ORTHO05D004143 1.9e-06 56.2 104 40.4
Phvul.008G075300 Phaseolus vulgaris HOM05D003683 ORTHO05D004143 1.9e-06 56.2 89 44.9
MD02G1201500 Malus domestica HOM05D003683 ORTHO05D004143 2.4e-06 55.8 79 50.6
GSVIVG01027629001 Vitis vinifera HOM05D003683 ORTHO05D004143 3.2e-06 55.5 101 39.6
CSS0019244 Camellia sinensis var. sinensis HOM05D003683 ORTHO05D004143 4.2e-06 55.1 78 50.0
Prupe.2G147300 Prunus persica HOM05D003683 ORTHO05D004143 4.2e-06 55.1 69 49.3
FvH4_7g12070 Fragaria vesca HOM05D003683 ORTHO05D004143 5.5e-06 54.7 97 44.3
FAN06G0493 Fragaria x ananassa HOM05D003683 ORTHO05D004143 5.5e-06 54.7 97 44.3
FAN06G2934 Fragaria x ananassa HOM05D003683 ORTHO05D004143 5.5e-06 54.7 97 44.3
Gohir.A03G010200 Gossypium hirsutum HOM05D003683 ORTHO05D004143 5.5e-06 54.7 75 48.0
HanXRQChr17g0557021 Helianthus annuus HOM05D003683 ORTHO05D004143 5.5e-06 54.7 90 45.6
VMungo1383G1500 Vigna mungo HOM05D003683 ORTHO05D004143 5.5e-06 54.7 88 44.3
CSS0021060 Camellia sinensis var. sinensis HOM05D003683 ORTHO05D004143 7.1e-06 54.3 79 46.8
Nitab4.5_0006122g0030 Nicotiana tabacum HOM05D003683 ORTHO05D004143 7.1e-06 54.3 60 53.3
Oeu056803.1 Olea europaea HOM05D003683 ORTHO05D004143 7.1e-06 54.3 94 42.6
Aa31LG1G26950 Aethionema arabicum HOM05D003683 ORTHO05D004143 9.3e-06 53.9 82 48.8
AL5G43210 Arabidopsis lyrata HOM05D003683 ORTHO05D004143 9.3e-06 53.9 91 41.8
BcaB02g08986 Brassica carinata HOM05D003683 ORTHO05D004143 9.3e-06 53.9 66 48.5
MELO3C005596.2 Cucumis melo HOM05D003683 ORTHO05D004143 9.3e-06 53.9 76 47.4
Hma1.2p1_0138F.1_g062970 Hydrangea macrophylla HOM05D003683 ORTHO05D004143 9.3e-06 53.9 76 48.7
Manes.02G031900 Manihot esculenta HOM05D003683 ORTHO05D004143 9.3e-06 53.9 78 46.2
Sp4g27480 Schrenkiella parvula HOM05D003683 ORTHO05D004143 9.3e-06 53.9 81 48.1


User provided reference genes

Program Settings