Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc01g090880.3 Solanum lycopersicum HOM05D006638 ORTHO05D008246 1.1e-119 433.3 224 100.0
Sopen01g036620 Solanum pennellii HOM05D006638 ORTHO05D008246 1.3e-115 419.9 225 97.8
PGSC0003DMG400025975 Solanum tuberosum HOM05D006638 ORTHO05D008246 1.2e-113 413.3 225 96.4
Nitab4.5_0011151g0010 Nicotiana tabacum HOM05D006638 ORTHO05D008246 9.8e-100 367.1 225 86.2
Nitab4.5_0000859g0190 Nicotiana tabacum HOM05D006638 ORTHO05D008246 2.0e-97 359.4 225 85.3
CAN.G1872.5 Capsicum annuum HOM05D006638 ORTHO05D008246 2.9e-96 355.5 204 89.7
Peaxi162Scf00803g00218 Petunia axillaris HOM05D006638 ORTHO05D008246 1.3e-83 313.5 224 76.8
FvH4_7g11040 Fragaria vesca HOM05D006638 ORTHO05D008246 2.2e-75 286.2 216 69.0
Hma1.2p1_0001F.1_g001240 Hydrangea macrophylla HOM05D006638 ORTHO05D008246 3.7e-75 285.4 205 69.8
Dinv44116 Davidia involucrata HOM05D006638 ORTHO05D008246 1.1e-74 283.9 193 71.5
FAN06G4764 Fragaria x ananassa HOM05D006638 ORTHO05D008246 1.6e-73 280.0 220 66.8
Nn2g12739 Nelumbo nucifera HOM05D006638 ORTHO05D008246 2.7e-73 279.3 219 63.9
FAN10G2039 Fragaria x ananassa HOM05D006638 ORTHO05D008246 3.5e-73 278.9 196 72.4
RcHm_v2.0_Chr1g0349031 Rosa chinensis HOM05D006638 ORTHO05D008246 3.5e-73 278.9 218 67.4
FAN10G1288 Fragaria x ananassa HOM05D006638 ORTHO05D008246 4.6e-73 278.5 196 72.4
Rhsim05G0215700 Rhododendron simsii HOM05D006638 ORTHO05D008246 4.6e-73 278.5 199 70.4
FAN03G2254 Fragaria x ananassa HOM05D006638 ORTHO05D008246 6.0e-73 278.1 196 71.9
QL04p037061 Quercus lobata HOM05D006638 ORTHO05D008246 6.0e-73 278.1 217 65.4
Haze_02520 Corylus avellana HOM05D006638 ORTHO05D008246 2.3e-72 276.2 219 64.8
Lalb_Chr07g0190301 Lupinus albus HOM05D006638 ORTHO05D008246 5.0e-72 275.0 191 70.7
Atru.chr5.234 Acer truncatum HOM05D006638 ORTHO05D008246 1.1e-71 273.9 217 66.4
HanXRQChr12g0384211 Helianthus annuus HOM05D006638 ORTHO05D008246 1.5e-71 273.5 216 66.7
Prupe.2G137100 Prunus persica HOM05D006638 ORTHO05D008246 3.3e-71 272.3 191 69.6
Lj7A537T49 Lonicera japonica HOM05D006638 ORTHO05D008246 4.3e-71 271.9 196 72.4
PSO170G5140 Papaver somniferum HOM05D006638 ORTHO05D008246 5.6e-71 271.6 213 62.4
TAR636G0703 Trochodendron aralioides HOM05D006638 ORTHO05D008246 5.6e-71 271.6 191 69.6
arahy.Tifrunner.gnm1.ann1.WQW1G6 Arachis hypogaea HOM05D006638 ORTHO05D008246 9.5e-71 270.8 216 65.3
CiPaw.14G025400 Carya illinoinensis HOM05D006638 ORTHO05D008246 9.5e-71 270.8 191 69.6
Lj3g0022109 Lotus japonicus HOM05D006638 ORTHO05D008246 1.2e-70 270.4 191 67.5
Glyma.03G033200 Glycine max HOM05D006638 ORTHO05D008246 1.6e-70 270.0 191 69.1
GSVIVG01018156001 Vitis vinifera HOM05D006638 ORTHO05D008246 1.6e-70 270.0 193 69.9
Atru.BG.68.p Acer truncatum HOM05D006638 ORTHO05D008246 2.1e-70 269.6 176 76.1
COL.COLO4_12484 Corchorus olitorius HOM05D006638 ORTHO05D008246 2.1e-70 269.6 187 69.0
Migut.N01611 Erythranthe guttata HOM05D006638 ORTHO05D008246 2.1e-70 269.6 208 65.9
Psat0s3685g0120 Pisum sativum HOM05D006638 ORTHO05D008246 3.6e-70 268.9 193 69.4
ECA234G0121 Erigeron canadensis HOM05D006638 ORTHO05D008246 4.7e-70 268.5 182 71.4
Ca_19858_v3 Cicer arietinum L. HOM05D006638 ORTHO05D008246 6.2e-70 268.1 188 69.7
DCAR_029874 Daucus carota HOM05D006638 ORTHO05D008246 8.1e-70 267.7 191 69.1
Aqoxy7G00747 Aquilegia oxysepala HOM05D006638 ORTHO05D008246 1.4e-69 266.9 193 66.8
Lsat_1_v5_gn_4_45501 Lactuca sativa HOM05D006638 ORTHO05D008246 1.4e-69 266.9 215 65.1
arahy.Tifrunner.gnm1.ann1.B645Y9 Arachis hypogaea HOM05D006638 ORTHO05D008246 4.0e-69 265.4 222 62.6
EL10Ac1g00836 Beta vulgaris HOM05D006638 ORTHO05D008246 4.0e-69 265.4 191 69.1
Thecc.01G384300 Theobroma cacao HOM05D006638 ORTHO05D008246 4.0e-69 265.4 213 64.3
CANSAT56G0739 Cannabis sativa HOM05D006638 ORTHO05D008246 5.2e-69 265.0 193 67.9
MSTRG.4914 Avicennia marina HOM05D006638 ORTHO05D008246 8.9e-69 264.2 214 62.6
Sabra01G0171300 Salix brachista HOM05D006638 ORTHO05D008246 1.2e-68 263.8 207 65.2
Cpa.g.sc49.148 Carica papaya HOM05D006638 ORTHO05D008246 1.5e-68 263.5 183 69.9
Eucgr.H00160 Eucalyptus grandis HOM05D006638 ORTHO05D008246 1.5e-68 263.5 179 72.6
SGA_v2.0_scaffold43G16517 Striga asiatica HOM05D006638 ORTHO05D008246 2.6e-68 262.7 229 62.0
TWI23G0519 Tripterygium wilfordii HOM05D006638 ORTHO05D008246 2.6e-68 262.7 208 66.8
Sc23g0003780 Simmondsia chinensis HOM05D006638 ORTHO05D008246 3.4e-68 262.3 182 72.5
MD07G1114500 Malus domestica HOM05D006638 ORTHO05D008246 4.4e-68 261.9 191 67.5
Potri.004G225600 Populus trichocarpa HOM05D006638 ORTHO05D008246 5.8e-68 261.5 184 70.7
CsaV3_3G007360 Cucumis sativus L. HOM05D006638 ORTHO05D008246 1.7e-67 260.0 201 64.7
Cc02_g24450 Coffea canephora HOM05D006638 ORTHO05D008246 2.2e-67 259.6 215 65.1
Aa31LG1G2420 Aethionema arabicum HOM05D006638 ORTHO05D008246 1.1e-66 257.3 191 66.0
Carub.0001s1192 Capsella rubella HOM05D006638 ORTHO05D008246 1.1e-66 257.3 194 64.4
SalBow1G6174 Salvia bowleyana HOM05D006638 ORTHO05D008246 1.1e-66 257.3 183 69.4
BraA09t41748Z Brassica rapa HOM05D006638 ORTHO05D008246 1.9e-66 256.5 185 67.0
C08p47510 Brassica napus HOM05D006638 ORTHO05D008246 2.4e-66 256.1 202 65.3
Medtr4g027430 Medicago truncatula HOM05D006638 ORTHO05D008246 2.4e-66 256.1 188 67.0
Duzib133G1291 Durio zibethinus HOM05D006638 ORTHO05D008246 3.2e-66 255.8 222 59.0
ClCG05G000210 Citrullus lanatus HOM05D006638 ORTHO05D008246 4.1e-66 255.4 184 67.9
BcaC07g41715 Brassica carinata HOM05D006638 ORTHO05D008246 7.1e-66 254.6 202 64.4
BcaC07g42567 Brassica carinata HOM05D006638 ORTHO05D008246 9.2e-66 254.2 209 61.7
Gorai.008G106400 Gossypium raimondii HOM05D006638 ORTHO05D008246 9.2e-66 254.2 189 66.1
Hund17047 Selenicereus undatus HOM05D006638 ORTHO05D008246 1.2e-65 253.8 180 70.6
CDE02G4315 Ceratophyllum demersum HOM05D000218 ORTHO05D000125 1.6e-65 253.4 194 65.5
Gohir.A12G095100 Gossypium hirsutum HOM05D006638 ORTHO05D008246 2.1e-65 253.1 187 66.8
CARHR012550 Cardamine hirsuta HOM05D006638 ORTHO05D008246 7.8e-65 251.1 215 59.5
Lj1g0022300 Lotus japonicus HOM05D006638 ORTHO05D008246 7.8e-65 251.1 191 64.4
THA.LOC104809455 Tarenaya hassleriana HOM05D006638 ORTHO05D008246 7.8e-65 251.1 193 66.3
BolC8t52292H Brassica oleracea HOM05D006638 ORTHO05D008246 1.0e-64 250.8 202 64.4
AL1G23530 Arabidopsis lyrata HOM05D006638 ORTHO05D008246 1.3e-64 250.4 212 59.0
Ciclev10023836m.g Citrus clementina HOM05D006638 ORTHO05D008246 1.7e-64 250.0 203 63.5
unitig_748.g7114 Utricularia gibba HOM05D006638 ORTHO05D008246 2.3e-64 249.6 183 64.5
Thhalv10008640m.g Eutrema salsugineum HOM05D006638 ORTHO05D008246 6.6e-64 248.1 185 65.4
AT1G12244 Arabidopsis thaliana HOM05D006638 ORTHO05D008246 8.6e-64 247.7 186 62.9
PGR142G0596 Punica granatum HOM05D006638 ORTHO05D008246 4.3e-63 245.4 257 52.5
HPP92_022319 Vanilla planifolia HOM05D006638 ORTHO05D008246 5.2e-61 238.4 174 67.8
HPP92_022327 Vanilla planifolia HOM05D006638 ORTHO05D008246 5.8e-60 235.0 174 66.7
VMungo0331G0589 Vigna mungo HOM05D006638 ORTHO05D008246 4.9e-59 231.9 191 62.3
Actinidia33482 Actinidia chinensis HOM05D006638 ORTHO05D008246 3.5e-57 225.7 191 66.5
TAR629G0886 Trochodendron aralioides HOM05D006638 ORTHO05D008246 6.6e-56 221.5 194 59.8
MELO3C005958.2 Cucumis melo HOM05D006638 ORTHO05D008246 3.6e-54 215.7 297 43.4
Sp1g10860 Schrenkiella parvula HOM05D006638 ORTHO05D008246 8.1e-54 214.5 224 54.0
Os10g0555200 Oryza sativa ssp. japonica HOM05D006638 ORTHO05D008246 1.1e-53 214.2 220 56.4
Phvul.010G071600 Phaseolus vulgaris HOM05D006638 ORTHO05D008246 2.0e-52 209.9 131 76.3
CSS0019813 Camellia sinensis var. sinensis HOM05D006638 ORTHO05D008246 3.8e-51 205.7 206 57.3
CSS0044007 Camellia sinensis var. sinensis HOM05D006638 ORTHO05D008246 4.2e-50 202.2 204 56.9
Manes.17G011000 Manihot esculenta HOM05D006638 ORTHO05D008246 1.2e-49 200.7 142 71.8
Ah.01g003990 Amaranthus hybridus HOM05D006638 ORTHO05D008246 3.0e-48 196.1 138 71.0
TPR.G27556 Trifolium pratense HOM05D006638 ORTHO05D008246 2.5e-47 193.0 128 71.9
Sed0019776 Sechium edule HOM05D006638 ORTHO05D008246 4.3e-47 192.2 129 71.3
Zm00001eb023510 Zea mays HOM05D006638 ORTHO05D008246 6.2e-46 188.3 189 58.7
Gohir.D12G097700 Gossypium hirsutum HOM05D006638 ORTHO05D008246 3.1e-45 186.0 127 70.9
ATR0317G113 Amborella trichopoda HOM05D006638 ORTHO05D008246 9.0e-45 184.5 142 60.6
MBI04_g09497_MAGBIO Magnolia biondii HOM05D006638 ORTHO05D008246 1.2e-44 184.1 185 54.6
vmacro21035 Vaccinium macrocarpon HOM05D006638 ORTHO05D008246 2.7e-41 172.9 116 74.1
Hma1.2p1_0001F.1_g001250 Hydrangea macrophylla HOM05D006638 ORTHO05D008246 3.5e-41 172.6 116 73.3
CSS0006996 Camellia sinensis var. sinensis HOM05D006638 ORTHO05D008246 1.7e-40 170.2 112 77.7
Oeu000021.1 Olea europaea HOM05D006638 ORTHO05D008246 3.0e-40 169.5 109 79.8
AagrBONN_evm.TU.Sc2ySwM_228.3890 Anthoceros agrestis HOM05D006638 ORTHO05D008246 2.5e-39 166.4 188 50.0
Mapoly0010s0011 Marchantia polymorpha HOM05D006638 ORTHO05D008246 1.8e-37 160.2 176 50.6
CSS0041268 Camellia sinensis var. sinensis HOM05D006638 ORTHO05D008246 4.0e-37 159.1 112 75.0
Pp3c1_23680 Physcomitrium patens HOM05D006638 ORTHO05D008246 1.2e-33 147.5 170 47.1
Rhsim01G0151400 Rhododendron simsii HOM05D006638 ORTHO05D008246 1.2e-33 147.5 106 67.0
Medtr2g064690 Medicago truncatula HOM05D006638 ORTHO05D008246 2.3e-32 143.3 129 58.1
FAN01G0965 Fragaria x ananassa HOM05D006638 ORTHO05D008246 3.3e-31 139.4 97 71.1
SMO340G0150 Selaginella moellendorffii HOM05D006638 ORTHO05D008246 4.9e-27 125.6 176 43.8
TPR.G4994 Trifolium pratense HOM05D006954 ORTHO05D008246 4.3e-23 112.5 91 58.2
Pp3c1_23620 Physcomitrium patens HOM05D006638 ORTHO05D008246 4.8e-22 109.0 133 45.9
CBR_g17705 Chara braunii HOM05D006638 ORTHO05D008246 5.1e-16 89.0 160 36.2
Lsat_1_v5_gn_6_51920 Lactuca sativa HOM05D006638 ORTHO05D008246 6.7e-16 88.6 71 62.0
Medtr2g064700 Medicago truncatula HOM05D006638 ORTHO05D008246 1.1e-15 87.8 74 56.8
vmacro21034 Vaccinium macrocarpon HOM05D006638 ORTHO05D008246 4.3e-15 85.9 64 64.1
Solyc12g035620.2 Solanum lycopersicum HOM05D006638 ORTHO05D008246 1.1e-10 71.2 48 70.8
Medtr2g064670 Medicago truncatula HOM05D006638 ORTHO05D008246 2.5e-10 70.1 65 50.8
Lsat_1_v5_gn_1_125220 Lactuca sativa HOM05D006638 ORTHO05D008246 3.2e-10 69.7 62 59.7
MELO3C033920.2 Cucumis melo HOM05D006638 ORTHO05D008246 2.3e-08 63.5 101 38.6


User provided reference genes

Program Settings