Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc01g090100.3 Solanum lycopersicum HOM05D002564 ORTHO05D011154 2.8e-103 378.6 193 100.0
Sopen01g035900 Solanum pennellii HOM05D002564 ORTHO05D011154 3.8e-84 315.1 232 73.7
Solyc01g090110.2 Solanum lycopersicum HOM05D002564 ORTHO05D011154 3.6e-74 282.0 241 65.1
Solyc01g090090.3 Solanum lycopersicum HOM05D002564 ORTHO05D011154 1.8e-73 279.6 190 72.1
Solyc01g057510.2 Solanum lycopersicum HOM05D002564 ORTHO05D011154 1.8e-65 253.1 231 61.9
Solyc01g090080.3 Solanum lycopersicum HOM05D002564 ORTHO05D011154 2.0e-56 223.0 240 50.8
Nitab4.5_0000563g0280 Nicotiana tabacum HOM05D002564 ORTHO05D011154 1.7e-44 183.3 240 42.5
Sopen01g022220 Solanum pennellii HOM05D005298 ORTHO05D008015 2.9e-44 182.6 188 55.9
CAN.G1497.3 Capsicum annuum HOM05D002564 ORTHO05D011154 3.8e-44 182.2 229 45.9
CAN.G1497.4 Capsicum annuum HOM05D002564 ORTHO05D011154 1.2e-42 177.2 218 49.1
Nitab4.5_0003596g0040 Nicotiana tabacum HOM05D002564 ORTHO05D011154 2.3e-41 172.9 240 41.7
PGSC0003DMG400039124 Solanum tuberosum HOM05D002564 ORTHO05D011154 2.8e-34 149.4 190 40.0
PGSC0003DMG400011987 Solanum tuberosum HOM05D002564 ORTHO05D011154 4.0e-33 145.6 145 53.1
Solyc01g090010.2 Solanum lycopersicum HOM05D002564 ORTHO05D011154 2.6e-32 142.9 230 40.0
PGSC0003DMG400011982 Solanum tuberosum HOM05D002564 ORTHO05D011154 6.3e-31 138.3 182 44.0
Sopen01g035890 Solanum pennellii HOM05D002564 ORTHO05D011154 1.1e-30 137.5 238 38.2
Solyc01g090030.2 Solanum lycopersicum HOM05D002564 ORTHO05D011154 1.4e-30 137.1 232 36.6
Solyc01g090070.2 Solanum lycopersicum HOM05D002564 ORTHO05D011154 1.8e-30 136.7 238 38.2
Solyc01g089920.3 Solanum lycopersicum HOM05D002564 ORTHO05D011154 1.2e-29 134.0 233 36.9
PGSC0003DMG400036059 Solanum tuberosum HOM05D002564 ORTHO05D011154 1.0e-28 131.0 234 37.6
Sopen01g035790 Solanum pennellii HOM05D002564 ORTHO05D011154 1.5e-27 127.1 231 38.5
Solyc03g113825.1 Solanum lycopersicum HOM05D002564 ORTHO05D011154 1.9e-27 126.7 233 38.6
Sopen01g035770 Solanum pennellii HOM05D002564 ORTHO05D011154 2.1e-26 123.2 259 33.6
Solyc01g090000.1 Solanum lycopersicum HOM05D002564 ORTHO05D011154 2.6e-24 116.3 226 32.3
CAN.G1585.17 Capsicum annuum HOM05D002564 ORTHO05D011154 9.8e-24 114.4 230 33.5
PGSC0003DMG400011986 Solanum tuberosum HOM05D002564 ORTHO05D011154 9.8e-24 114.4 142 45.8
PGSC0003DMG400042267 Solanum tuberosum HOM05D002564 ORTHO05D011154 7.0e-22 108.2 190 37.4
Sopen01g035870 Solanum pennellii HOM05D002564 ORTHO05D011154 2.7e-21 106.3 231 33.8
PGSC0003DMG400042136 Solanum tuberosum HOM05D002564 ORTHO05D398490 2.5e-19 99.8 166 34.9
PGSC0003DMG400017370 Solanum tuberosum HOM05D002564 ORTHO05D394569 9.5e-19 97.8 114 43.9
Solyc01g089940.1 Solanum lycopersicum HOM05D002564 ORTHO05D011154 1.6e-18 97.1 176 34.7
CAN.G1497.2 Capsicum annuum HOM05D002564 ORTHO05D011154 3.1e-17 92.8 143 37.8
Solyc03g113840.3 Solanum lycopersicum HOM05D003119 ORTHO05D003559 3.1e-17 92.8 117 43.6
CAN.G1585.16 Capsicum annuum HOM05D002564 ORTHO05D011154 1.1e-14 84.3 233 27.9
PGSC0003DMG400011988 Solanum tuberosum HOM05D002564 ORTHO05D011154 5.4e-14 82.0 182 33.0
PGSC0003DMG400045632 Solanum tuberosum HOM05D002564 ORTHO05D011154 1.7e-12 77.0 47 74.5
PGSC0003DMG400046680 Solanum tuberosum HOM05D002564 ORTHO05D011154 8.6e-12 74.7 190 28.4
PGSC0003DMG400028015 Solanum tuberosum HOM05D002564 ORTHO05D011154 4.3e-11 72.4 50 68.0
PGSC0003DMG400036924 Solanum tuberosum HOM05D002564 ORTHO05D397037 1.2e-08 64.3 73 37.0
CAN.G1298.27 Capsicum annuum HOM05D002189 ORTHO05D002233 2.6e-08 63.2 99 37.4
TWI15G0629 Tripterygium wilfordii HOM05D002564 ORTHO05D003945 7.6e-08 61.6 169 29.0
Migut.E00823 Erythranthe guttata HOM05D002564 ORTHO05D003945 1.3e-07 60.8 178 28.1
TAR004G0001 Trochodendron aralioides HOM05D002564 ORTHO05D003945 2.2e-07 60.1 140 29.3
TWI60G0953 Tripterygium wilfordii HOM05D002564 ORTHO05D003945 2.9e-07 59.7 169 29.0
Atru.chr9.1224 Acer truncatum HOM05D002564 ORTHO05D003945 3.7e-07 59.3 135 30.4
CsaV3_3G049850 Cucumis sativus L. HOM05D002564 ORTHO05D003945 3.7e-07 59.3 140 30.7
Psat4g075160 Pisum sativum HOM05D002564 ORTHO05D003945 3.7e-07 59.3 140 31.4
TAR374G0594 Trochodendron aralioides HOM05D002564 ORTHO05D003945 3.7e-07 59.3 140 28.6
Cpa.g.sc89.3 Carica papaya HOM05D002564 ORTHO05D003945 4.9e-07 58.9 130 30.8
PSO782G2969 Papaver somniferum HOM05D002564 ORTHO05D003945 4.9e-07 58.9 144 27.8
Medtr5g013340 Medicago truncatula HOM05D002564 ORTHO05D003945 6.4e-07 58.5 149 28.2
Phvul.003G224400 Phaseolus vulgaris HOM05D002564 ORTHO05D003945 6.4e-07 58.5 176 29.5
Ca_24608_v3 Cicer arietinum L. HOM05D002564 ORTHO05D003945 8.4e-07 58.2 140 30.7
Glyma.17G146500 Glycine max HOM05D002564 ORTHO05D003945 8.4e-07 58.2 145 29.7
PSO063G6369 Papaver somniferum HOM05D002564 ORTHO05D003945 8.4e-07 58.2 140 28.6
Aqoxy3G02682 Aquilegia oxysepala HOM05D002564 ORTHO05D003945 1.4e-06 57.4 141 29.8
Psat2g176040 Pisum sativum HOM05D002564 ORTHO05D003945 1.4e-06 57.4 140 30.0
ClCG09G012790 Citrullus lanatus HOM05D002564 ORTHO05D003945 1.9e-06 57.0 140 29.3
MELO3C003331.2 Cucumis melo HOM05D002564 ORTHO05D003945 1.9e-06 57.0 140 30.0
Gohir.D12G216300 Gossypium hirsutum HOM05D002564 ORTHO05D003945 1.9e-06 57.0 140 28.6
Gorai.008G231700 Gossypium raimondii HOM05D002564 ORTHO05D003945 1.9e-06 57.0 140 28.6
Gohir.A12G213700 Gossypium hirsutum HOM05D002564 ORTHO05D003945 2.4e-06 56.6 140 27.9
Nn1g00814 Nelumbo nucifera HOM05D002564 ORTHO05D003945 2.4e-06 56.6 132 30.3
TAR629G3463 Trochodendron aralioides HOM05D002564 ORTHO05D003945 2.4e-06 56.6 133 30.8
CSS0020501 Camellia sinensis var. sinensis HOM05D002564 ORTHO05D003945 3.2e-06 56.2 139 30.9
Duzib205G0006 Durio zibethinus HOM05D002564 ORTHO05D003945 3.2e-06 56.2 130 30.8
Thecc.03G242800 Theobroma cacao HOM05D002564 ORTHO05D003945 3.2e-06 56.2 130 29.2
VMungo0251G2763 Vigna mungo HOM05D002564 ORTHO05D003945 3.2e-06 56.2 138 31.2
Glyma.05G064700 Glycine max HOM05D002564 ORTHO05D003945 4.1e-06 55.8 143 29.4
SalBow1G5297 Salvia bowleyana HOM05D002564 ORTHO05D003945 4.1e-06 55.8 130 30.8
SalBow1G6888 Salvia bowleyana HOM05D002564 ORTHO05D003945 4.1e-06 55.8 130 30.8
TAR375G0233 Trochodendron aralioides HOM05D002564 ORTHO05D003945 4.1e-06 55.8 140 28.6
AUR62018857 Chenopodium quinoa HOM05D002564 ORTHO05D003945 5.4e-06 55.5 169 27.2
Glyma.01G205200 Glycine max HOM05D002564 ORTHO05D003945 5.4e-06 55.5 140 30.0
Gohir.A11G028900 Gossypium hirsutum HOM05D002564 ORTHO05D003945 5.4e-06 55.5 130 30.0
Gohir.D11G027400 Gossypium hirsutum HOM05D002564 ORTHO05D003945 5.4e-06 55.5 130 30.0
Gorai.007G029900 Gossypium raimondii HOM05D002564 ORTHO05D003945 5.4e-06 55.5 130 30.0
Lj4g0000920 Lotus japonicus HOM05D002564 ORTHO05D003945 5.4e-06 55.5 140 29.3
Oeu037378.2 Olea europaea HOM05D002564 ORTHO05D003945 5.4e-06 55.5 177 27.1
TPR.G31430 Trifolium pratense HOM05D002564 ORTHO05D003945 5.4e-06 55.5 140 30.0
CSS0031131 Camellia sinensis var. sinensis HOM05D002564 ORTHO05D003945 7.1e-06 55.1 170 28.2
AUR62007154 Chenopodium quinoa HOM05D002564 ORTHO05D003945 7.1e-06 55.1 169 27.2
Duzib084G1389 Durio zibethinus HOM05D002564 ORTHO05D003945 7.1e-06 55.1 132 30.3
Gorai.004G193400 Gossypium raimondii HOM05D002564 ORTHO05D003945 9.2e-06 54.7 130 28.5
Rhsim07G0118600 Rhododendron simsii HOM05D002564 ORTHO05D003945 9.2e-06 54.7 169 27.8
Rhsim07G0118800 Rhododendron simsii HOM05D002564 ORTHO05D003945 9.2e-06 54.7 169 27.8


User provided reference genes

Program Settings