Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc01g089900.4 Solanum lycopersicum HOM05D006213 ORTHO05D008107 1.2e-286 989.2 500 100.0
CAN.G1585.8 Capsicum annuum HOM05D006213 ORTHO05D008107 6.2e-272 940.3 500 93.2
Sopen01g035740 Solanum pennellii HOM05D006213 ORTHO05D008107 5.5e-236 820.8 415 98.8
Peaxi162Scf00853g00316 Petunia axillaris HOM05D006213 ORTHO05D008107 1.1e-233 813.1 502 82.5
Nitab4.5_0004837g0040 Nicotiana tabacum HOM05D006213 ORTHO05D008107 1.2e-230 803.1 524 80.3
Dinv44047 Davidia involucrata HOM05D006213 ORTHO05D008107 2.8e-224 781.9 495 75.4
HanXRQChr17g0562541 Helianthus annuus HOM05D006213 ORTHO05D008107 1.5e-217 759.6 495 73.5
RcHm_v2.0_Chr1g0346061 Rosa chinensis HOM05D006213 ORTHO05D008107 2.0e-217 759.2 496 73.0
MSTRG.20674 Avicennia marina HOM05D006213 ORTHO05D008107 4.8e-216 754.6 491 74.1
ECA234G2079 Erigeron canadensis HOM05D006213 ORTHO05D008107 4.1e-215 751.5 490 73.3
QL04p029079 Quercus lobata HOM05D006213 ORTHO05D008107 5.4e-215 751.1 493 72.2
Migut.B01508 Erythranthe guttata HOM05D006213 ORTHO05D008107 7.0e-215 750.7 491 73.1
Thecc.01G397800 Theobroma cacao HOM05D006213 ORTHO05D008107 5.9e-214 747.7 492 73.6
Oeu037443.2 Olea europaea HOM05D006213 ORTHO05D008107 1.0e-213 746.9 468 76.3
CiPaw.13G025000 Carya illinoinensis HOM05D006213 ORTHO05D008107 2.9e-213 745.3 495 70.7
SalBow5G4694 Salvia bowleyana HOM05D006213 ORTHO05D008107 8.6e-213 743.8 491 73.9
Gorai.004G166900 Gossypium raimondii HOM05D006213 ORTHO05D008107 1.4e-210 736.5 495 72.3
Ciclev10019843m.g Citrus clementina HOM05D006213 ORTHO05D008107 2.3e-210 735.7 489 71.4
Lsat_1_v5_gn_4_39261 Lactuca sativa HOM05D006213 ORTHO05D008107 3.0e-210 735.3 492 72.8
Gohir.A08G139600 Gossypium hirsutum HOM05D006213 ORTHO05D008107 1.2e-209 733.4 492 72.0
Gohir.D08G160600 Gossypium hirsutum HOM05D006213 ORTHO05D008107 9.8e-209 730.3 492 71.7
ClCG06G000670 Citrullus lanatus HOM05D006213 ORTHO05D008107 2.2e-208 729.2 495 70.1
Duzib133G0253 Durio zibethinus HOM05D006213 ORTHO05D008107 4.9e-208 728.0 484 73.1
Actinidia30939 Actinidia chinensis HOM05D006213 ORTHO05D008107 1.8e-207 726.1 475 74.1
TWI14G1148 Tripterygium wilfordii HOM05D006213 ORTHO05D008107 2.4e-207 725.7 495 70.9
CsaV3_6G006460 Cucumis sativus L. HOM05D006213 ORTHO05D008107 3.1e-207 725.3 495 70.7
Manes.05G056250 Manihot esculenta HOM05D006213 ORTHO05D008107 2.0e-206 722.6 496 70.6
Sed0013772 Sechium edule HOM05D006213 ORTHO05D008107 7.8e-206 720.7 495 70.1
Prupe.2G122100 Prunus persica HOM05D006213 ORTHO05D008107 1.7e-205 719.5 469 73.1
Aqoxy3G02673 Aquilegia oxysepala HOM05D006213 ORTHO05D008107 8.6e-205 717.2 499 70.1
FvH4_7g09360 Fragaria vesca HOM05D006213 ORTHO05D008107 1.1e-204 716.8 496 69.2
Potri.002G139200 Populus trichocarpa HOM05D006213 ORTHO05D008107 2.5e-204 715.7 496 70.4
PGR042G3832 Punica granatum HOM05D006213 ORTHO05D008107 5.6e-204 714.5 495 70.1
FAN06G2734 Fragaria x ananassa HOM05D006213 ORTHO05D008107 7.3e-204 714.1 511 67.3
FAN06G3851 Fragaria x ananassa HOM05D006213 ORTHO05D008107 7.3e-204 714.1 511 67.3
FAN06G4345 Fragaria x ananassa HOM05D006213 ORTHO05D008107 7.3e-204 714.1 511 67.3
Eucgr.E01545 Eucalyptus grandis HOM05D006213 ORTHO05D008107 1.0e-202 710.3 495 69.1
arahy.Tifrunner.gnm1.ann1.SKJX1Q Arachis hypogaea HOM05D006213 ORTHO05D008107 4.4e-201 704.9 496 68.5
COL.COLO4_12385 Corchorus olitorius HOM05D006213 ORTHO05D008107 5.8e-201 704.5 464 73.1
FAN03G1287 Fragaria x ananassa HOM05D006213 ORTHO05D008107 1.3e-200 703.4 511 66.7
GSVIVG01018298001 Vitis vinifera HOM05D006213 ORTHO05D008107 2.9e-200 702.2 469 71.6
PSO017G1536 Papaver somniferum HOM05D006213 ORTHO05D008107 3.2e-199 698.7 492 68.5
Psat4g223120 Pisum sativum HOM05D006213 ORTHO05D008107 1.2e-198 696.8 492 67.9
Lalb_Chr12g0210581 Lupinus albus HOM05D006213 ORTHO05D008107 1.6e-198 696.4 492 68.3
Glyma.03G108200 Glycine max HOM05D006213 ORTHO05D008107 3.5e-198 695.3 492 68.1
PSO837G0013 Papaver somniferum HOM05D006213 ORTHO05D008107 6.0e-198 694.5 492 68.3
CANSAT25G1963 Cannabis sativa HOM05D006213 ORTHO05D008107 1.7e-197 693.0 495 67.7
Sabra02G0108200 Salix brachista HOM05D006213 ORTHO05D008107 1.5e-196 689.9 547 64.4
MBI04_g13842_MAGBIO Magnolia biondii HOM05D006213 ORTHO05D008107 5.6e-196 688.0 498 67.5
Sc23g0004890 Simmondsia chinensis HOM05D006213 ORTHO05D008107 1.2e-195 686.8 495 65.7
Phvul.010G045600 Phaseolus vulgaris HOM05D006213 ORTHO05D008107 2.1e-195 686.0 494 67.6
Sabra02G0108400 Salix brachista HOM05D006213 ORTHO05D008107 6.2e-195 684.5 547 63.8
CARHR000180 Cardamine hirsuta HOM05D006213 ORTHO05D008107 8.0e-195 684.1 495 66.7
Carub.0001s0002 Capsella rubella HOM05D006213 ORTHO05D008107 1.1e-191 673.7 492 65.0
Sp1g00110 Schrenkiella parvula HOM05D006213 ORTHO05D008107 3.2e-191 672.2 489 65.8
AL1G10080 Arabidopsis lyrata HOM05D006213 ORTHO05D008107 4.1e-191 671.8 489 65.4
MELO3C022474.2 Cucumis melo HOM05D006213 ORTHO05D008107 4.1e-191 671.8 457 70.0
Medtr8g007345 Medicago truncatula HOM05D006213 ORTHO05D008107 5.4e-191 671.4 490 64.9
BraA10t42287Z Brassica rapa HOM05D006213 ORTHO05D008107 1.2e-190 670.2 493 64.9
A10p00090 Brassica napus HOM05D006213 ORTHO05D008107 1.6e-190 669.8 493 64.9
Nn1g00791 Nelumbo nucifera HOM05D006213 ORTHO05D008107 1.6e-190 669.8 492 66.1
C05p00060 Brassica napus HOM05D006213 ORTHO05D008107 2.7e-190 669.1 493 64.7
BolC5t28793H Brassica oleracea HOM05D006213 ORTHO05D008107 2.7e-190 669.1 493 64.7
THA.LOC104814061 Tarenaya hassleriana HOM05D006213 ORTHO05D008107 1.0e-189 667.2 498 66.7
Aa31LG1G11550 Aethionema arabicum HOM05D006213 ORTHO05D008107 8.6e-189 664.1 524 62.4
vmacro13511 Vaccinium macrocarpon HOM05D006213 ORTHO05D008107 4.7e-187 658.3 608 57.7
MD07G1098100 Malus domestica HOM05D006213 ORTHO05D008107 5.2e-186 654.8 438 73.5
Os04g0544900 Oryza sativa ssp. japonica HOM05D006213 ORTHO05D008107 2.2e-184 649.4 489 63.4
CDE02G2871 Ceratophyllum demersum HOM05D006213 ORTHO05D008107 3.7e-184 648.7 480 63.5
ATR0665G630 Amborella trichopoda HOM05D006213 ORTHO05D008107 1.9e-183 646.4 482 64.5
AUR62013761 Chenopodium quinoa HOM05D006213 ORTHO05D008107 1.2e-182 643.7 525 61.1
Lj3g0010513 Lotus japonicus HOM05D006213 ORTHO05D008107 1.2e-182 643.7 457 68.1
BcaC07g42440 Brassica carinata HOM05D006213 ORTHO05D008107 1.6e-182 643.3 493 62.5
HPP92_020680 Vanilla planifolia HOM05D006213 ORTHO05D008107 3.5e-182 642.1 483 65.2
BraA09t42282Z Brassica rapa HOM05D006213 ORTHO05D008107 4.6e-182 641.7 493 63.1
SGA_v2.0_scaffold52G19244 Striga asiatica HOM05D006213 ORTHO05D008107 3.9e-181 638.6 470 69.1
TPR.G32127 Trifolium pratense HOM05D006213 ORTHO05D008107 1.2e-177 627.1 518 60.2
AT1G02145 Arabidopsis thaliana HOM05D006213 ORTHO05D008107 2.0e-177 626.3 453 65.3
PGSC0003DMG402031172 Solanum tuberosum HOM05D006213 ORTHO05D008107 2.2e-176 622.9 334 95.8
Hund17106 Selenicereus undatus HOM05D006213 ORTHO05D008107 7.8e-174 614.4 495 62.2
Nitab4.5_0000563g0240 Nicotiana tabacum HOM05D006213 ORTHO05D008107 6.2e-171 604.7 988 42.3
A09p69370 Brassica napus HOM05D006213 ORTHO05D008107 1.2e-169 600.5 505 59.4
Zm00001eb075160 Zea mays HOM05D006213 ORTHO05D008107 1.2e-169 600.5 488 60.9
BcaB03g13635 Brassica carinata HOM05D006213 ORTHO05D008107 2.5e-164 582.8 492 58.5
Thhalv10007459m.g Eutrema salsugineum HOM05D006213 ORTHO05D008107 3.6e-163 578.9 414 68.6
AUR62023393 Chenopodium quinoa HOM05D006213 ORTHO05D008107 4.8e-163 578.6 517 56.7
FAN10G1434 Fragaria x ananassa HOM05D006213 ORTHO05D008107 6.9e-162 574.7 431 63.8
BolC8t52928H Brassica oleracea HOM05D006213 ORTHO05D008107 1.5e-156 557.0 510 55.7
Glyma.07G119300 Glycine max HOM05D006213 ORTHO05D008107 1.8e-154 550.1 394 66.2
EL10Ac1g00745 Beta vulgaris HOM05D006213 ORTHO05D008107 9.0e-154 547.7 495 56.8
Cc02_g25210 Coffea canephora HOM05D006213 ORTHO05D008107 5.1e-149 531.9 335 79.4
Mapoly0044s0100 Marchantia polymorpha HOM05D006213 ORTHO05D008107 6.7e-149 531.6 484 54.3
unitig_8.g3848 Utricularia gibba HOM05D006213 ORTHO05D008107 1.1e-148 530.8 484 58.1
AagrBONN_evm.TU.Sc2ySwM_344.5349 Anthoceros agrestis HOM05D006213 ORTHO05D008107 8.2e-147 524.6 484 53.9
Lj2g0022411 Lotus japonicus HOM05D006213 ORTHO05D008107 3.1e-146 522.7 396 63.1
Pp3c18_21620 Physcomitrium patens HOM05D006213 ORTHO05D008107 3.4e-145 519.2 484 52.7
TAR374G1216 Trochodendron aralioides HOM05D006213 ORTHO05D008107 2.9e-144 516.2 334 76.9
VMungo0331G0117 Vigna mungo HOM05D006213 ORTHO05D008107 1.4e-138 497.3 689 43.3
Haze_02866 Corylus avellana HOM05D006213 ORTHO05D008107 5.7e-132 475.3 531 50.8
SMO117G0345 Selaginella moellendorffii HOM05D006213 ORTHO05D008107 4.2e-127 459.1 427 54.3
Lj9A554T27 Lonicera japonica HOM05D006213 ORTHO05D008107 3.9e-117 426.0 312 67.6
BcaC07g42336 Brassica carinata HOM05D006213 ORTHO05D008107 1.7e-115 420.6 468 48.1
Sabra02G0107000 Salix brachista HOM05D006213 ORTHO05D008107 1.5e-108 397.5 350 58.3
SGA_v2.0_scaffold340G49332 Striga asiatica HOM05D006213 ORTHO05D008107 3.1e-106 389.8 499 46.7
Rhsim07G0037600 Rhododendron simsii HOM05D006213 ORTHO05D008107 9.4e-103 378.3 446 49.6
Atru.chr5.108 Acer truncatum HOM05D006213 ORTHO05D008107 1.4e-82 311.2 251 61.8
FAN01G1024 Fragaria x ananassa HOM05D006213 ORTHO05D008107 1.5e-79 301.2 201 73.1
MCO12G031 Micromonas commoda HOM05D006213 ORTHO05D008107 6.8e-77 292.4 553 35.1
SHI13624 Sapria himalayana HOM05D006213 ORTHO05D008107 5.6e-71 272.7 302 52.0
PRCOL_00003622 Prasinoderma coloniale HOM05D006213 ORTHO05D008107 1.1e-66 258.5 482 35.5
FAN06G1264 Fragaria x ananassa HOM05D006213 ORTHO05D008107 1.7e-64 251.1 201 62.7
SEGI_13726 Sequoiadendron giganteum HOM05D006213 ORTHO05D008107 7.6e-60 235.7 183 59.6
DCAR_029492 Daucus carota HOM05D006213 ORTHO05D008107 7.8e-57 225.7 160 66.9
arahy.Tifrunner.gnm1.ann1.RXQ5U4 Arachis hypogaea HOM05D006213 ORTHO05D008107 4.2e-42 176.8 161 59.0
Ca_14798_v3 Cicer arietinum L. HOM05D006213 ORTHO05D008107 3.5e-41 173.7 115 73.9
Cc02_g25230 Coffea canephora HOM05D006213 ORTHO05D008107 4.6e-41 173.3 112 67.0
SHI13625 Sapria himalayana HOM05D006213 ORTHO05D008107 2.9e-27 127.5 155 42.6
DCAR_029493 Daucus carota HOM05D006213 ORTHO05D008107 3.2e-26 124.0 67 80.6
Psat4g223040 Pisum sativum HOM05D006213 ORTHO05D008107 7.4e-23 112.8 80 72.5
Psat5g245640 Pisum sativum HOM05D000300 ORTHO05D000383 4.6e-17 93.6 64 71.9
arahy.Tifrunner.gnm1.ann1.PL2W5K Arachis hypogaea HOM05D006213 ORTHO05D008107 1.7e-14 85.1 81 44.4
Migut.B01510 Erythranthe guttata HOM05D006213 ORTHO05D003423 1.1e-13 82.4 43 86.0
FAN06G1132 Fragaria x ananassa HOM05D006213 ORTHO05D008107 1.1e-13 82.4 114 43.0
TPR.G39431 Trifolium pratense HOM05D006213 ORTHO05D008107 6.9e-13 79.7 46 82.6
Cc02_g25220 Coffea canephora HOM05D006213 ORTHO05D008107 1.2e-12 79.0 49 73.5
Atru.chr5.109 Acer truncatum HOM05D006213 ORTHO05D000044 5.5e-10 70.1 44 75.0
Mapoly0152s0016 Marchantia polymorpha HOM05D005919 ORTHO05D007176 3.0e-08 64.3 234 27.8
AUR62013597 Chenopodium quinoa HOM05D005919 ORTHO05D007176 2.6e-07 61.2 285 26.3
SMO172G0226 Selaginella moellendorffii HOM05D005919 ORTHO05D007176 2.8e-06 57.8 262 24.8


User provided reference genes

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