Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc01g088770.3 Solanum lycopersicum HOM05D007841 ORTHO05D009919 4.4e-33 144.1 73 100.0
Sopen01g035610 Solanum pennellii HOM05D007841 ORTHO05D009919 4.4e-33 144.1 73 100.0
PGSC0003DMG400001726 Solanum tuberosum HOM05D007841 ORTHO05D009919 4.4e-33 144.1 73 100.0
CAN.G756.38 Capsicum annuum HOM05D007841 ORTHO05D009919 2.0e-30 135.2 73 90.4
Hma1.2p1_2138F.1_g314930 Hydrangea macrophylla HOM05D007841 ORTHO05D009919 7.2e-28 126.7 73 83.6
Oeu034848.1 Olea europaea HOM05D007841 ORTHO05D009919 9.4e-28 126.3 71 85.9
EL10Ac1g00736 Beta vulgaris HOM05D007841 ORTHO05D009919 1.0e-26 122.9 70 82.9
HanXRQChr01g0019691 Helianthus annuus HOM05D007841 ORTHO05D009919 1.4e-26 122.5 73 80.8
Cc02_g25410 Coffea canephora HOM05D007841 ORTHO05D009919 2.3e-26 121.7 70 82.9
Prupe.2G120100 Prunus persica HOM05D007841 ORTHO05D009919 3.0e-26 121.3 70 80.0
Actinidia30942 Actinidia chinensis HOM05D007841 ORTHO05D009919 6.8e-26 120.2 73 79.5
Lsat_1_v5_gn_1_83981 Lactuca sativa HOM05D007841 ORTHO05D009919 6.8e-26 120.2 72 81.9
Atru.chr5.91 Acer truncatum HOM05D007841 ORTHO05D009919 8.8e-26 119.8 66 86.4
PGR004G1954 Punica granatum HOM05D007841 ORTHO05D009919 8.8e-26 119.8 72 81.9
CiPaw.14G018000 Carya illinoinensis HOM05D007841 ORTHO05D009919 1.2e-25 119.4 70 82.9
RcHm_v2.0_Chr1g0345181 Rosa chinensis HOM05D007841 ORTHO05D009919 2.0e-25 118.6 73 78.1
COL.COLO4_12370 Corchorus olitorius HOM05D007841 ORTHO05D009919 3.4e-25 117.9 70 84.3
ECA248G0141 Erigeron canadensis HOM05D007841 ORTHO05D009919 3.4e-25 117.9 72 79.2
Gohir.D12G101400 Gossypium hirsutum HOM05D007841 ORTHO05D009919 4.4e-25 117.5 70 80.0
Gorai.008G110500 Gossypium raimondii HOM05D007841 ORTHO05D009919 4.4e-25 117.5 70 80.0
Duzib138G1421 Durio zibethinus HOM05D007841 ORTHO05D009919 5.7e-25 117.1 70 80.0
Phvul.008G138900 Phaseolus vulgaris HOM05D007841 ORTHO05D009919 5.7e-25 117.1 70 80.0
arahy.Tifrunner.gnm1.ann1.K94MSK Arachis hypogaea HOM05D007841 ORTHO05D009919 9.8e-25 116.3 71 78.9
Psat3g152880 Pisum sativum HOM05D007841 ORTHO05D009919 1.3e-24 115.9 70 80.0
Potri.014G051850 Populus trichocarpa HOM05D007841 ORTHO05D009919 1.3e-24 115.9 70 81.4
Migut.N01723 Erythranthe guttata HOM05D007841 ORTHO05D009919 1.7e-24 115.5 73 78.1
CANSAT25G3347 Cannabis sativa HOM05D007841 ORTHO05D009919 2.2e-24 115.2 65 83.1
CANSAT25G3825 Cannabis sativa HOM05D007841 ORTHO05D009919 2.2e-24 115.2 65 83.1
Manes.05G057100 Manihot esculenta HOM05D007841 ORTHO05D009919 2.2e-24 115.2 64 85.9
Medtr7g050540 Medicago truncatula HOM05D007841 ORTHO05D009919 2.8e-24 114.8 70 78.6
Eucgr.D01199 Eucalyptus grandis HOM05D007841 ORTHO05D009919 3.7e-24 114.4 70 80.0
Gohir.A12G098200 Gossypium hirsutum HOM05D007841 ORTHO05D009919 3.7e-24 114.4 70 77.1
CsaV3_3G010620 Cucumis sativus L. HOM05D007841 ORTHO05D009919 4.9e-24 114.0 72 77.8
Glyma.08G340600 Glycine max HOM05D007841 ORTHO05D009919 6.3e-24 113.6 70 78.6
Thecc.01G400700 Theobroma cacao HOM05D007841 ORTHO05D009919 6.3e-24 113.6 74 79.7
Lalb_Chr03g0040951 Lupinus albus HOM05D007841 ORTHO05D009919 8.3e-24 113.2 70 78.6
Lj1g0014858 Lotus japonicus HOM05D007841 ORTHO05D009919 1.1e-23 112.8 70 78.6
PSO675G0834 Papaver somniferum HOM05D007841 ORTHO05D009919 1.4e-23 112.5 64 81.2
THA.LOC104814059 Tarenaya hassleriana HOM05D007841 ORTHO05D009919 1.4e-23 112.5 68 79.4
MD02G1221100 Malus domestica HOM05D007841 ORTHO05D009919 1.8e-23 112.1 70 75.7
Nitab4.5_0004425g0050 Nicotiana tabacum HOM05D007841 ORTHO05D009919 4.1e-23 110.9 67 79.1
PSO732G0215 Papaver somniferum HOM05D007841 ORTHO05D009919 7.0e-23 110.2 73 71.2
Thhalv10009237m.g Eutrema salsugineum HOM05D007841 ORTHO05D009919 9.1e-23 109.8 73 74.0
Aqoxy7G00835 Aquilegia oxysepala HOM05D007841 ORTHO05D009919 1.2e-22 109.4 65 81.5
AL1G10060 Arabidopsis lyrata HOM05D007841 ORTHO05D009919 1.2e-22 109.4 70 75.7
AT1G02160 Arabidopsis thaliana HOM05D007841 ORTHO05D009919 1.6e-22 109.0 71 74.6
BcaB03g13636 Brassica carinata HOM05D000300 ORTHO05D000383 1.6e-22 109.0 73 74.0
Peaxi162Scf00793g00363 Petunia axillaris HOM05D007841 ORTHO05D009919 1.6e-22 109.0 57 89.5
Carub.0001s0004 Capsella rubella HOM05D007841 ORTHO05D009919 2.0e-22 108.6 64 81.2
CARHR000160 Cardamine hirsuta HOM05D007841 ORTHO05D009919 2.0e-22 108.6 64 81.2
ClCG05G003010 Citrullus lanatus HOM05D007841 ORTHO05D009919 2.0e-22 108.6 70 75.7
MD07G1096500 Malus domestica HOM05D007841 ORTHO05D009919 2.0e-22 108.6 70 75.7
Sed0011386 Sechium edule HOM05D007841 ORTHO05D009919 2.0e-22 108.6 70 75.7
C05p00040 Brassica napus HOM05D007841 ORTHO05D009919 5.9e-22 107.1 73 72.6
BolC5t28791H Brassica oleracea HOM05D007841 ORTHO05D009919 5.9e-22 107.1 73 72.6
FvH4_7g09140 Fragaria vesca HOM05D007841 ORTHO05D009919 2.9e-21 104.8 71 73.2
unitig_22.g6702 Utricularia gibba HOM05D007841 ORTHO05D009919 5.0e-21 104.0 74 74.3
GSVIVG01018320001 Vitis vinifera HOM05D007841 ORTHO05D009919 1.5e-20 102.4 70 75.7
Haze_02887 Corylus avellana HOM05D000061 ORTHO05D000915 9.5e-20 99.8 58 75.9
FAN06G3108 Fragaria x ananassa HOM05D007841 ORTHO05D009919 9.5e-20 99.8 68 72.1
Os04g0665000 Oryza sativa ssp. japonica HOM05D007841 ORTHO05D009919 1.6e-19 99.0 66 74.2
SalBow4G0679 Salvia bowleyana HOM05D007841 ORTHO05D009919 1.6e-19 99.0 57 75.4
Zm00001eb067220 Zea mays HOM05D007841 ORTHO05D009919 1.4e-18 95.9 65 73.8
Hund17114 Selenicereus undatus HOM05D007841 ORTHO05D009919 3.0e-18 94.7 54 77.8
arahy.Tifrunner.gnm1.ann1.X5EUJ4 Arachis hypogaea HOM05D007841 ORTHO05D009919 5.2e-18 94.0 56 78.6
CSS0006405 Camellia sinensis var. sinensis HOM05D007841 ORTHO05D009919 5.2e-18 94.0 57 73.7
Ciclev10023064m.g Citrus clementina HOM05D007841 ORTHO05D009919 4.4e-17 90.9 50 82.0
AUR62013771 Chenopodium quinoa HOM05D007841 ORTHO05D009919 5.7e-17 90.5 54 79.6
AUR62023385 Chenopodium quinoa HOM05D007841 ORTHO05D009919 7.5e-17 90.1 54 77.8
Sc02g0003210 Simmondsia chinensis HOM05D007841 ORTHO05D009919 9.8e-17 89.7 50 84.0
PSO732G0130 Papaver somniferum HOM05D007841 ORTHO05D009919 2.8e-16 88.2 48 79.2
Nn6g33742 Nelumbo nucifera HOM05D007841 ORTHO05D009919 6.3e-16 87.0 54 72.2
Sp1g00090 Schrenkiella parvula HOM05D007841 ORTHO05D009919 1.4e-15 85.9 57 70.2
BraA10t42285Z Brassica rapa HOM05D007841 ORTHO05D009919 3.2e-15 84.7 48 79.2
FAN01G1055 Fragaria x ananassa HOM05D007841 ORTHO05D009919 1.6e-14 82.4 55 70.9
FAN03G2201 Fragaria x ananassa HOM05D007841 ORTHO05D009919 1.6e-14 82.4 55 70.9
Pp3c22_2080 Physcomitrium patens HOM05D007841 ORTHO05D009919 5.9e-14 80.5 71 59.2
Sabra14G0036700 Salix brachista HOM05D007841 ORTHO05D009919 2.5e-12 75.1 41 90.2
Aa31LG1G11570 Aethionema arabicum HOM05D007841 ORTHO05D009919 7.3e-12 73.6 48 75.0
TAR375G0262 Trochodendron aralioides HOM05D006103 ORTHO05D007468 1.8e-10 68.9 45 75.6
Mapoly0181s0011 Marchantia polymorpha HOM05D007841 ORTHO05D009919 5.2e-10 67.4 59 55.9
Actinidia05779 Actinidia chinensis HOM05D007841 ORTHO05D009919 3.4e-09 64.7 33 84.8
AagrBONN_evm.TU.Sc2ySwM_228.3132 Anthoceros agrestis HOM05D007841 ORTHO05D009919 3.4e-09 64.7 53 58.5
CAN.G756.35 Capsicum annuum HOM05D007841 ORTHO05D009919 5.8e-09 63.9 36 86.1


User provided reference genes

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