Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc01g088040.3 Solanum lycopersicum HOM05D009126 ORTHO05D011285 1.7e-28 128.6 65 100.0
QL07p035122 Quercus lobata HOM05D009126 ORTHO05D011285 7.9e-10 66.6 44 70.5
CSS0000199 Camellia sinensis var. sinensis HOM05D009126 ORTHO05D011285 1.5e-08 62.4 48 64.6
Sed0014859 Sechium edule HOM05D009126 ORTHO05D011285 1.5e-08 62.4 49 63.3
Cfa014130 Carpinus fangiana HOM05D009126 ORTHO05D011285 1.9e-08 62.0 39 71.8
ClCG11G018970 Citrullus lanatus HOM05D009126 ORTHO05D011285 3.3e-08 61.2 48 60.4
Hma1.2p1_0699F.1_g205690 Hydrangea macrophylla HOM05D009126 ORTHO05D011285 5.7e-08 60.5 48 62.5
Ciclev10003083m.g Citrus clementina HOM05D009126 ORTHO05D011285 7.4e-08 60.1 46 60.9
CiPaw.07G134400 Carya illinoinensis HOM05D009126 ORTHO05D011285 9.7e-08 59.7 46 63.0
CiPaw.08G076800 Carya illinoinensis HOM05D009126 ORTHO05D011285 9.7e-08 59.7 46 65.2
Rhsim06G0003900 Rhododendron simsii HOM05D009126 ORTHO05D011285 1.3e-07 59.3 48 62.5
Thecc.08G064400 Theobroma cacao HOM05D009126 ORTHO05D011285 2.2e-07 58.5 39 69.2
Cfa003654 Carpinus fangiana HOM05D009126 ORTHO05D011285 3.7e-07 57.8 39 66.7
Manes.18G002601 Manihot esculenta HOM05D009126 ORTHO05D011285 3.7e-07 57.8 46 60.9
CsaV3_4G037570 Cucumis sativus L. HOM05D009126 ORTHO05D011285 4.8e-07 57.4 37 73.0
SGA_v2.0_scaffold54G19626 Striga asiatica HOM05D009126 ORTHO05D011285 1.4e-06 55.8 46 60.9
Atru.chr13.74 Acer truncatum HOM05D009126 ORTHO05D011285 1.8e-06 55.5 41 63.4
Potri.005G255701 Populus trichocarpa HOM05D009126 ORTHO05D011285 4.1e-06 54.3 43 65.1
Aa31sc158G30 Aethionema arabicum HOM05D009126 ORTHO05D011285 5.3e-06 53.9 50 52.0
Migut.N02982 Erythranthe guttata HOM05D009126 ORTHO05D011285 6.9e-06 53.5 48 54.2
Migut.O00885 Erythranthe guttata HOM05D009126 ORTHO05D011285 6.9e-06 53.5 48 54.2
Lj3g0009895 Lotus japonicus HOM05D009126 ORTHO05D011285 6.9e-06 53.5 49 51.0
Carub.0005s1498 Capsella rubella HOM05D009126 ORTHO05D011285 9.0e-06 53.1 42 59.5
Oeu035861.2 Olea europaea HOM05D009126 ORTHO05D011285 9.0e-06 53.1 46 52.2
unitig_21.g20582 Utricularia gibba HOM05D009126 ORTHO05D011285 9.0e-06 53.1 38 60.5


User provided reference genes

Program Settings