Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc01g087860.2 Solanum lycopersicum HOM05D007776 ORTHO05D009812 3.1e-85 318.5 172 100.0
PGSC0003DMG400006837 Solanum tuberosum HOM05D007776 ORTHO05D009812 1.7e-75 286.2 173 84.4
Sopen01g034790 Solanum pennellii HOM05D007776 ORTHO05D009812 2.2e-59 232.6 125 93.6
Dinv41753 Davidia involucrata HOM05D000238 ORTHO05D002999 6.9e-21 104.8 112 52.7
Migut.C01313 Erythranthe guttata HOM05D007776 ORTHO05D009812 1.3e-19 100.5 181 42.0
CiPaw.07G236300 Carya illinoinensis HOM05D007776 ORTHO05D009812 3.2e-18 95.9 152 44.1
Gohir.D05G288000 Gossypium hirsutum HOM05D007776 ORTHO05D009812 1.2e-17 94.0 146 43.2
Gorai.009G303100 Gossypium raimondii HOM05D007776 ORTHO05D009812 1.2e-17 94.0 146 43.2
Manes.02G198100 Manihot esculenta HOM05D007776 ORTHO05D009812 1.2e-17 94.0 146 45.2
CiPaw.05G123100 Carya illinoinensis HOM05D007776 ORTHO05D009812 3.6e-17 92.4 127 48.0
MD15G1406800 Malus domestica HOM05D007776 ORTHO05D009812 1.4e-16 90.5 113 49.6
CANSAT25G0596 Cannabis sativa HOM05D007776 ORTHO05D009812 2.3e-16 89.7 128 45.3
Prupe.1G555000 Prunus persica HOM05D007776 ORTHO05D009812 2.3e-16 89.7 110 50.0
Gohir.A05G287000 Gossypium hirsutum HOM05D007776 ORTHO05D009812 5.1e-16 88.6 145 44.8
CSS0049282 Camellia sinensis var. sinensis HOM05D007776 ORTHO05D009812 2.6e-15 86.3 114 51.8
Nn5g27525 Nelumbo nucifera HOM05D007776 ORTHO05D009812 2.6e-15 86.3 134 44.0
Potri.013G107300 Populus trichocarpa HOM05D007776 ORTHO05D009812 7.4e-15 84.7 147 42.9
Potri.019G079800 Populus trichocarpa HOM05D007776 ORTHO05D009812 1.3e-14 84.0 140 45.0
TWI59G0674 Tripterygium wilfordii HOM05D007776 ORTHO05D009812 1.3e-14 84.0 104 51.0
Ciclev10002690m.g Citrus clementina HOM05D007776 ORTHO05D009812 3.7e-14 82.4 143 44.1
Haze_21304 Corylus avellana HOM05D007776 ORTHO05D009812 6.3e-14 81.6 132 46.2
TWI14G0313 Tripterygium wilfordii HOM05D007776 ORTHO05D009812 8.2e-14 81.3 133 43.6
Cc10_g10000 Coffea canephora HOM05D007776 ORTHO05D009812 1.1e-13 80.9 136 43.4
Lsat_1_v5_gn_3_48301 Lactuca sativa HOM05D007776 ORTHO05D009812 1.4e-13 80.5 123 43.9
THA.LOC104806792 Tarenaya hassleriana HOM05D007776 ORTHO05D009812 1.8e-13 80.1 142 43.0
BolC6t36249H Brassica oleracea HOM05D007776 ORTHO05D009812 2.4e-13 79.7 147 40.1
C06p11140 Brassica napus HOM05D007776 ORTHO05D009812 6.9e-13 78.2 137 42.3
RcHm_v2.0_Chr7g0227891 Rosa chinensis HOM05D007776 ORTHO05D009812 6.9e-13 78.2 113 47.8
BraA09t38716Z Brassica rapa HOM05D007776 ORTHO05D009812 9.1e-13 77.8 119 45.4
FAN04G0521 Fragaria x ananassa HOM05D007776 ORTHO05D009812 9.1e-13 77.8 110 45.5
BcaC08g43737 Brassica carinata HOM05D007776 ORTHO05D009812 2.0e-12 76.6 119 44.5
A09p31800 Brassica napus HOM05D007776 ORTHO05D009812 2.6e-12 76.3 119 42.9
FAN04G1877 Fragaria x ananassa HOM05D007776 ORTHO05D009812 2.6e-12 76.3 110 45.5
FAN08G2421 Fragaria x ananassa HOM05D007776 ORTHO05D009812 3.4e-12 75.9 129 41.9
Sed0008767 Sechium edule HOM05D007776 ORTHO05D009812 5.9e-12 75.1 108 49.1
Sabra19G0091100 Salix brachista HOM05D007776 ORTHO05D009812 7.7e-12 74.7 122 43.4
VMungo1080G1686 Vigna mungo HOM05D007776 ORTHO05D009812 7.7e-12 74.7 134 41.8
Aa31LG6G8730 Aethionema arabicum HOM05D007776 ORTHO05D009812 1.0e-11 74.3 128 43.0
FvH4_5g31870 Fragaria vesca HOM05D007776 ORTHO05D009812 1.0e-11 74.3 129 41.1
FAN18G1270 Fragaria x ananassa HOM05D007776 ORTHO05D009812 1.3e-11 73.9 129 41.1
Cfa012949 Carpinus fangiana HOM05D007776 ORTHO05D009812 2.9e-11 72.8 134 43.3
CARHR034200 Cardamine hirsuta HOM05D007776 ORTHO05D009812 5.0e-11 72.0 109 48.6
Psat5g210040 Pisum sativum HOM05D007776 ORTHO05D009812 6.5e-11 71.6 162 38.3
Lalb_Chr25g0282901 Lupinus albus HOM05D007776 ORTHO05D009812 8.5e-11 71.2 121 44.6
Sp1g30150 Schrenkiella parvula HOM05D007776 ORTHO05D009812 8.5e-11 71.2 106 49.1
Ca_14480_v3 Cicer arietinum L. HOM05D007776 ORTHO05D009812 1.9e-10 70.1 134 39.6
PGR042G2621 Punica granatum HOM05D007776 ORTHO05D009812 1.9e-10 70.1 127 43.3
Duzib177G0943 Durio zibethinus HOM05D007776 ORTHO05D009812 2.5e-10 69.7 117 43.6
Thecc.08G190700 Theobroma cacao HOM05D007776 ORTHO05D009812 2.5e-10 69.7 144 40.3
ECA233G5618 Erigeron canadensis HOM05D007776 ORTHO05D009812 3.2e-10 69.3 57 54.4
Cpa.g.sc507.3 Carica papaya HOM05D007776 ORTHO05D009812 5.5e-10 68.6 124 43.5
Duzib116G0238 Durio zibethinus HOM05D007776 ORTHO05D009812 5.5e-10 68.6 113 45.1
Sabra13G0092600 Salix brachista HOM05D007776 ORTHO05D009812 5.5e-10 68.6 119 48.7
AT1G35430 Arabidopsis thaliana HOM05D007776 ORTHO05D009812 9.4e-10 67.8 109 45.9
HanXRQChr05g0130261 Helianthus annuus HOM05D007776 ORTHO05D009812 9.4e-10 67.8 116 37.9
QL02p026198 Quercus lobata HOM05D007776 ORTHO05D009812 1.2e-09 67.4 139 40.3
AL1G50270 Arabidopsis lyrata HOM05D007776 ORTHO05D009812 2.7e-09 66.2 111 46.8
Rhsim12G0006900 Rhododendron simsii HOM05D007776 ORTHO05D009812 2.7e-09 66.2 104 43.3
Carub.0001s3303 Capsella rubella HOM05D007776 ORTHO05D009812 4.7e-09 65.5 115 43.5
ClCG11G008540 Citrullus lanatus HOM05D007776 ORTHO05D009812 1.0e-08 64.3 114 42.1
Phvul.005G023800 Phaseolus vulgaris HOM05D007776 ORTHO05D009812 1.0e-08 64.3 135 38.5
TPR.G27845 Trifolium pratense HOM05D000479 ORTHO05D009812 1.0e-08 64.3 146 37.0
Ah.05g178510 Amaranthus hybridus HOM05D007776 ORTHO05D009812 1.8e-08 63.5 124 37.9
TAR628G0395 Trochodendron aralioides HOM05D007776 ORTHO05D009812 1.8e-08 63.5 120 38.3
BcaB01g02801 Brassica carinata HOM05D007776 ORTHO05D009812 2.3e-08 63.2 105 40.0
Lsat_1_v5_gn_8_157180 Lactuca sativa HOM05D007776 ORTHO05D009812 6.7e-08 61.6 61 50.8
COL.COLO4_25869 Corchorus olitorius HOM05D007776 ORTHO05D009812 1.5e-07 60.5 53 54.7
Medtr0045s0130 Medicago truncatula HOM05D007776 ORTHO05D009812 2.0e-07 60.1 146 34.9
Thhalv10029064m.g Eutrema salsugineum HOM05D007776 ORTHO05D009812 2.6e-07 59.7 125 37.6
Lj3g0020626 Lotus japonicus HOM05D007776 ORTHO05D009812 2.6e-07 59.7 137 40.1
A03p28480 Brassica napus HOM05D007776 ORTHO05D009812 5.7e-07 58.5 102 39.2
BraA03t12053Z Brassica rapa HOM05D007776 ORTHO05D009812 5.7e-07 58.5 102 39.2
PGSC0003DMG400008051 Solanum tuberosum HOM05D006634 ORTHO05D008282 5.7e-07 58.5 38 81.6
Peaxi162Scf00076g00214 Petunia axillaris HOM05D007776 ORTHO05D009812 7.4e-07 58.2 78 50.0
CARHR260240 Cardamine hirsuta HOM05D007776 ORTHO05D009812 1.3e-06 57.4 108 41.7
SalBow7G1484 Salvia bowleyana HOM05D007776 ORTHO05D009812 1.7e-06 57.0 110 39.1
BcaC01g04727 Brassica carinata HOM05D007776 ORTHO05D009812 4.8e-06 55.5 102 38.2


User provided reference genes

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