Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc01g081588.1 Solanum lycopersicum HOM05D023029 ORTHO05D026032 5.7e-74 280.8 139 100.0
Sopen01g033130 Solanum pennellii HOM05D023029 ORTHO05D026032 8.2e-73 276.9 139 98.6
PGSC0003DMG400031125 Solanum tuberosum HOM05D023029 ORTHO05D026032 1.7e-65 252.7 139 89.2
Solyc01g081580.2 Solanum lycopersicum HOM05D023029 ORTHO05D026032 2.1e-23 112.8 130 46.9
Peaxi162Scf01213g00004 Petunia axillaris HOM05D023029 ORTHO05D026032 7.6e-18 94.4 118 39.8
QL04p000796 Quercus lobata HOM05D000275 ORTHO05D000181 7.6e-10 67.8 93 33.3
TAR623G0763 Trochodendron aralioides HOM05D000275 ORTHO05D000181 1.7e-09 66.6 94 34.0
Potri.001G232900 Populus trichocarpa HOM05D000275 ORTHO05D000181 3.8e-09 65.5 94 29.8
MBI04_g37006_MAGBIO Magnolia biondii HOM05D000275 ORTHO05D000181 1.1e-08 63.9 94 30.9
CANSAT11G2344 Cannabis sativa HOM05D000275 ORTHO05D000181 1.9e-08 63.2 93 29.0
Potri.001G232700 Populus trichocarpa HOM05D000275 ORTHO05D000181 1.9e-08 63.2 94 28.7
DCAR_015724 Daucus carota HOM05D000275 ORTHO05D000181 2.4e-08 62.8 124 29.0
Aqoxy2G02542 Aquilegia oxysepala HOM05D000275 ORTHO05D000181 4.2e-08 62.0 99 30.3
arahy.Tifrunner.gnm1.ann1.EB1W4P Arachis hypogaea HOM05D000275 ORTHO05D000181 7.1e-08 61.2 120 28.3
Solyc01g081590.4 Solanum lycopersicum HOM05D000275 ORTHO05D020304 7.1e-08 61.2 128 24.2
MSTRG.28109 Avicennia marina HOM05D000275 ORTHO05D000181 1.2e-07 60.5 97 29.9
CiPaw.15G186600 Carya illinoinensis HOM05D000275 ORTHO05D000181 3.5e-07 58.9 93 26.9
PGSC0003DMG400031126 Solanum tuberosum HOM05D000275 ORTHO05D020304 4.6e-07 58.5 128 24.2
Cpa.g.sc228.23 Carica papaya HOM05D000275 ORTHO05D000181 1.0e-06 57.4 91 30.8
Cfa010681 Carpinus fangiana HOM05D000275 ORTHO05D000181 1.0e-06 57.4 130 26.9
Sabra09G0016700 Salix brachista HOM05D000275 ORTHO05D000181 1.0e-06 57.4 132 24.2
SalBow4G2860 Salvia bowleyana HOM05D000275 ORTHO05D000181 1.0e-06 57.4 96 25.0
BcaB04g18572 Brassica carinata HOM05D000275 ORTHO05D000181 3.9e-06 55.5 91 31.9
Solyc01g081600.3 Solanum lycopersicum HOM05D000275 ORTHO05D000181 3.9e-06 55.5 94 31.9
Sopen01g033150 Solanum pennellii HOM05D000275 ORTHO05D000181 3.9e-06 55.5 94 31.9
Dinv43951 Davidia involucrata HOM05D000275 ORTHO05D000181 5.1e-06 55.1 132 25.0
BcaB06g29060 Brassica carinata HOM05D000275 ORTHO05D000181 6.6e-06 54.7 96 30.2
HanXRQChr03g0089201 Helianthus annuus HOM05D000275 ORTHO05D000181 6.6e-06 54.7 96 30.2
Gohir.A02G027300 Gossypium hirsutum HOM05D000275 ORTHO05D000181 8.7e-06 54.3 101 23.8


User provided reference genes

Program Settings