Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc01g081420.3 Solanum lycopersicum HOM05D004910 ORTHO05D006864 3.3e-124 448.4 220 100.0
Sopen01g032990 Solanum pennellii HOM05D004910 ORTHO05D006864 1.5e-121 439.5 216 99.1
Nitab4.5_0006461g0010 Nicotiana tabacum HOM05D004910 ORTHO05D006864 1.3e-117 426.4 216 95.8
Nitab4.5_0000792g0070 Nicotiana tabacum HOM05D004910 ORTHO05D006864 1.7e-117 426.0 219 95.0
CAN.G992.20 Capsicum annuum HOM05D004910 ORTHO05D006864 4.7e-115 417.9 216 92.6
Peaxi162Scf00907g00123 Petunia axillaris HOM05D004910 ORTHO05D006864 7.8e-110 400.6 230 87.0
Dinv43524 Davidia involucrata HOM05D004910 ORTHO05D006864 4.3e-108 394.8 216 87.0
TAR629G2465 Trochodendron aralioides HOM05D004910 ORTHO05D006864 7.6e-105 384.0 216 84.3
DCAR_029567 Daucus carota HOM05D004910 ORTHO05D006864 1.3e-104 383.3 216 84.7
Ciclev10030475m.g Citrus clementina HOM05D004910 ORTHO05D006864 2.2e-104 382.5 216 83.3
Atru.chr2.1651 Acer truncatum HOM05D004910 ORTHO05D006864 3.8e-104 381.7 216 82.9
Manes.08G157000 Manihot esculenta HOM05D004910 ORTHO05D006864 6.4e-104 380.9 216 83.3
TWI34G0933 Tripterygium wilfordii HOM05D004910 ORTHO05D006864 3.2e-103 378.6 216 83.8
QL04p053202 Quercus lobata HOM05D004910 ORTHO05D006864 7.1e-103 377.5 216 83.3
Cc08_g05600 Coffea canephora HOM05D004910 ORTHO05D006864 9.3e-103 377.1 216 81.9
Lj3g0022995 Lotus japonicus HOM05D004910 ORTHO05D006864 9.3e-103 377.1 216 82.9
Migut.N01670 Erythranthe guttata HOM05D004910 ORTHO05D006864 1.6e-102 376.3 216 83.8
CiPaw.02G046700 Carya illinoinensis HOM05D004910 ORTHO05D006864 2.1e-102 375.9 216 81.9
COL.COLO4_08664 Corchorus olitorius HOM05D004910 ORTHO05D006864 4.6e-102 374.8 216 82.9
arahy.Tifrunner.gnm1.ann1.2JI1W5 Arachis hypogaea HOM05D004910 ORTHO05D006864 1.0e-101 373.6 216 81.5
Lsat_1_v5_gn_4_42261 Lactuca sativa HOM05D004910 ORTHO05D006864 1.0e-101 373.6 215 83.7
Glyma.07G122900 Glycine max HOM05D004910 ORTHO05D006864 1.7e-101 372.9 216 82.4
Potri.013G071800 Populus trichocarpa HOM05D004910 ORTHO05D006864 1.7e-101 372.9 216 82.4
Cpa.g.sc73.62 Carica papaya HOM05D004910 ORTHO05D006864 3.0e-101 372.1 218 81.7
Cfa003693 Carpinus fangiana HOM05D004910 ORTHO05D006864 5.1e-101 371.3 210 82.9
SalBow4G1969 Salvia bowleyana HOM05D004910 ORTHO05D006864 5.1e-101 371.3 216 82.4
GSVIVG01019298001 Vitis vinifera HOM05D004910 ORTHO05D006864 5.1e-101 371.3 216 81.5
Glyma.03G099800 Glycine max HOM05D004910 ORTHO05D006864 1.1e-100 370.2 216 81.9
Thecc.05G234000 Theobroma cacao HOM05D004910 ORTHO05D006864 1.5e-100 369.8 216 81.9
FAN03G0816 Fragaria x ananassa HOM05D004910 ORTHO05D006864 2.5e-100 369.0 216 81.9
ATR0829G021 Amborella trichopoda HOM05D004910 ORTHO05D006864 5.6e-100 367.9 216 78.7
Duzib177G0285 Durio zibethinus HOM05D004910 ORTHO05D006864 5.6e-100 367.9 216 81.5
Phvul.010G039700 Phaseolus vulgaris HOM05D004910 ORTHO05D006864 5.6e-100 367.9 216 81.5
FvH4_7g07740 Fragaria vesca HOM05D004910 ORTHO05D006864 9.6e-100 367.1 216 81.5
FAN01G0980 Fragaria x ananassa HOM05D004910 ORTHO05D006864 9.6e-100 367.1 216 81.5
Ca_25886_v3 Cicer arietinum L. HOM05D004910 ORTHO05D006864 2.8e-99 365.5 216 81.5
FAN06G0636 Fragaria x ananassa HOM05D004910 ORTHO05D006864 2.8e-99 365.5 216 81.0
Prupe.2G105000 Prunus persica HOM05D004910 ORTHO05D006864 2.8e-99 365.5 216 80.6
FAN10G3403 Fragaria x ananassa HOM05D004910 ORTHO05D006864 3.6e-99 365.2 216 81.0
Gorai.007G249800 Gossypium raimondii HOM05D004910 ORTHO05D006864 3.6e-99 365.2 216 80.6
PSO063G2935 Papaver somniferum HOM05D004910 ORTHO05D006864 3.6e-99 365.2 217 80.2
RcHm_v2.0_Chr1g0342311 Rosa chinensis HOM05D004910 ORTHO05D006864 8.1e-99 364.0 216 81.0
MELO3C006215.2 Cucumis melo HOM05D004910 ORTHO05D006864 1.1e-98 363.6 216 79.2
PSO782G5450 Papaver somniferum HOM05D004910 ORTHO05D006864 1.8e-98 362.8 217 79.7
HanXRQChr15g0492621 Helianthus annuus HOM05D004910 ORTHO05D006864 4.0e-98 361.7 215 80.5
CANSAT25G1237 Cannabis sativa HOM05D004910 ORTHO05D006864 6.9e-98 360.9 216 78.7
vmacro13594 Vaccinium macrocarpon HOM05D004910 ORTHO05D006864 9.0e-98 360.5 226 77.4
TPR.G17367 Trifolium pratense HOM05D004910 ORTHO05D006864 1.5e-97 359.8 216 80.1
Medtr8g009780 Medicago truncatula HOM05D004910 ORTHO05D006864 9.9e-97 357.1 216 80.1
CsaV3_3G009930 Cucumis sativus L. HOM05D004910 ORTHO05D006864 3.8e-96 355.1 216 77.8
Eucgr.D01069 Eucalyptus grandis HOM05D004910 ORTHO05D006864 8.4e-96 354.0 216 78.2
Lalb_Chr07g0194851 Lupinus albus HOM05D004910 ORTHO05D006864 8.4e-96 354.0 216 78.7
Psat4g215960 Pisum sativum HOM05D004910 ORTHO05D006864 1.4e-95 353.2 216 78.2
THA.LOC104805731 Tarenaya hassleriana HOM05D004910 ORTHO05D006864 2.4e-95 352.4 217 76.5
Sed0008127 Sechium edule HOM05D004910 ORTHO05D006864 3.2e-95 352.1 216 78.2
Rhsim07G0047300 Rhododendron simsii HOM05D004910 ORTHO05D006864 4.2e-95 351.7 198 83.8
PGR083G1400 Punica granatum HOM05D004910 ORTHO05D006864 4.6e-94 348.2 217 77.0
Aqoxy3G02002 Aquilegia oxysepala HOM05D004910 ORTHO05D006864 3.0e-93 345.5 219 74.9
ECA234G3354 Erigeron canadensis HOM05D004910 ORTHO05D006864 6.6e-93 344.4 198 81.8
AL7G44770 Arabidopsis lyrata HOM05D004910 ORTHO05D006864 1.6e-91 339.7 216 74.1
arahy.Tifrunner.gnm1.ann1.7UUD9R Arachis hypogaea HOM05D004910 ORTHO05D006864 4.8e-91 338.2 216 75.5
Aa31LG9G17970 Aethionema arabicum HOM05D004910 ORTHO05D006864 1.1e-90 337.0 216 74.1
EL10Ac1g00665 Beta vulgaris HOM05D004910 ORTHO05D006864 9.0e-90 334.0 241 67.6
Haze_15794 Corylus avellana HOM05D004910 ORTHO05D006864 4.2e-87 325.1 183 82.0
MD07G1080500 Malus domestica HOM05D004910 ORTHO05D006864 3.0e-85 318.9 182 81.9
Zm00001eb025470 Zea mays HOM05D004910 ORTHO05D006864 3.7e-83 312.0 209 70.3
Prupe.2G100700 Prunus persica HOM05D004910 ORTHO05D006864 2.4e-82 309.3 182 80.2
unitig_578.g16705 Utricularia gibba HOM05D004910 ORTHO05D006864 2.9e-80 302.4 216 69.0
MBI04_g30775_MAGBIO Magnolia biondii HOM05D004910 ORTHO05D006864 2.3e-77 292.7 261 60.2
AagrBONN_evm.TU.Sc2ySwM_362.1947 Anthoceros agrestis HOM05D004910 ORTHO05D006864 1.5e-76 290.0 213 65.3
Mapoly0032s0018 Marchantia polymorpha HOM05D004910 ORTHO05D006864 2.5e-76 289.3 216 63.4
Os04g0218600 Oryza sativa ssp. japonica HOM05D004910 ORTHO05D006864 4.3e-76 288.5 183 72.1
Pp3c7_26820 Physcomitrium patens HOM05D004910 ORTHO05D006864 1.3e-75 287.0 214 65.0
Ah.05g177140 Amaranthus hybridus HOM05D004910 ORTHO05D006864 1.2e-70 270.4 170 75.3
CBR_g49462 Chara braunii HOM05D004910 ORTHO05D006864 1.3e-67 260.4 203 60.1
AUR62038025 Chenopodium quinoa HOM05D004910 ORTHO05D006864 1.5e-65 253.4 217 61.8
AUR62014510 Chenopodium quinoa HOM05D004910 ORTHO05D006864 7.7e-65 251.1 217 61.8
VMungo0331G1288 Vigna mungo HOM05D004910 ORTHO05D010195 1.8e-61 240.0 128 88.3
ClCG05G002500 Citrullus lanatus HOM05D004910 ORTHO05D006864 1.1e-55 220.7 136 75.0
Hund26917 Selenicereus undatus HOM05D004910 ORTHO05D006864 9.4e-55 217.6 135 74.8
Gohir.A11G225602 Gossypium hirsutum HOM05D004910 ORTHO05D006864 1.8e-45 186.8 117 75.2
CDE12G0362 Ceratophyllum demersum HOM05D004910 ORTHO05D006864 2.0e-44 183.3 216 47.7
CSS0002002 Camellia sinensis var. sinensis HOM05D004910 ORTHO05D006864 3.1e-34 149.4 73 90.4
CSS0008041 Camellia sinensis var. sinensis HOM05D004910 ORTHO05D006864 3.1e-34 149.4 73 90.4
CSS0036242 Camellia sinensis var. sinensis HOM05D004910 ORTHO05D006864 7.2e-31 138.3 89 74.2
CSS0010022 Camellia sinensis var. sinensis HOM05D004910 ORTHO05D006864 9.5e-31 137.9 89 74.2
Actinidia21203 Actinidia chinensis HOM05D004910 ORTHO05D006864 1.8e-29 133.7 64 93.8
VMungo0331G1962 Vigna mungo HOM05D004910 ORTHO05D006864 2.3e-29 133.3 92 69.6
SEGI_03241 Sequoiadendron giganteum HOM05D004910 ORTHO05D006864 1.4e-26 124.0 95 62.1
Dinv00622 Davidia involucrata HOM05D004910 ORTHO05D006864 4.0e-21 105.9 79 68.4
Nitab4.5_0011076g0010 Nicotiana tabacum HOM05D004910 ORTHO05D006864 7.5e-20 101.7 55 89.1
CSS0032650 Camellia sinensis var. sinensis HOM05D004910 ORTHO05D006864 9.8e-20 101.3 57 82.5
Actinidia31737 Actinidia chinensis HOM05D004910 ORTHO05D006864 1.3e-19 100.9 55 83.6
ClCG00G006380 Citrullus lanatus HOM05D004910 ORTHO05D006864 7.8e-17 91.7 53 81.1
SGA_v2.0_scaffold4G02226 Striga asiatica HOM05D004910 ORTHO05D006864 2.3e-13 80.1 55 70.9
Phvul.010G039400 Phaseolus vulgaris HOM05D004910 ORTHO05D006864 3.4e-12 76.3 55 70.9
Haze_15793 Corylus avellana HOM05D004910 ORTHO05D006864 8.6e-08 61.6 38 81.6
Lj9A617T56 Lonicera japonica HOM05D004910 ORTHO05D006864 9.5e-07 58.2 36 77.8


User provided reference genes

Program Settings