Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc01g081200.3 Solanum lycopersicum HOM05D007033 ORTHO05D008770 6.7e-66 253.8 125 100.0
Sopen01g032780 Solanum pennellii HOM05D007033 ORTHO05D008770 2.6e-65 251.9 125 99.2
PGSC0003DMG400001787 Solanum tuberosum HOM05D007033 ORTHO05D008770 9.4e-60 233.4 125 91.2
CAN.G700.33 Capsicum annuum HOM05D007033 ORTHO05D008770 5.3e-55 217.6 125 86.4
Peaxi162Scf00592g00448 Petunia axillaris HOM05D007033 ORTHO05D008770 3.2e-52 208.4 125 81.6
Nitab4.5_0004800g0080 Nicotiana tabacum HOM05D007033 ORTHO05D008770 3.2e-44 181.8 107 86.9
Nitab4.5_0004594g0020 Nicotiana tabacum HOM05D007033 ORTHO05D008770 4.2e-44 181.4 108 86.1
TWI60G0127 Tripterygium wilfordii HOM05D007033 ORTHO05D008770 2.6e-41 172.2 115 71.3
Cc02_g26390 Coffea canephora HOM05D007033 ORTHO05D008770 3.4e-41 171.8 123 64.2
PGR042G3214 Punica granatum HOM05D007033 ORTHO05D008770 1.7e-40 169.5 128 67.2
Dinv43975 Davidia involucrata HOM05D007033 ORTHO05D008770 6.3e-40 167.5 127 64.6
Carub.0006s1585 Capsella rubella HOM05D007033 ORTHO05D008770 1.1e-39 166.8 112 71.4
GSVIVG01011318001 Vitis vinifera HOM05D007033 ORTHO05D008770 1.4e-39 166.4 116 66.4
Ciclev10033075m.g Citrus clementina HOM05D007033 ORTHO05D008770 1.8e-39 166.0 122 65.6
C02p09210 Brassica napus HOM05D007033 ORTHO05D008770 5.4e-39 164.5 108 72.2
BcaC03g13530 Brassica carinata HOM05D007033 ORTHO05D008770 7.0e-39 164.1 108 71.3
BolC2t06829H Brassica oleracea HOM05D007033 ORTHO05D008770 7.0e-39 164.1 108 71.3
ClCG05G002970 Citrullus lanatus HOM05D007033 ORTHO05D008770 9.1e-39 163.7 114 64.9
CsaV3_3G010550 Cucumis sativus L. HOM05D007033 ORTHO05D008770 1.2e-38 163.3 114 64.9
Rhsim12G0078100 Rhododendron simsii HOM05D007033 ORTHO05D008770 1.2e-38 163.3 120 66.7
A02p04360 Brassica napus HOM05D007033 ORTHO05D008770 1.6e-38 162.9 108 70.4
BraA02t05400Z Brassica rapa HOM05D007033 ORTHO05D008770 1.6e-38 162.9 108 70.4
MELO3C006276.2 Cucumis melo HOM05D007033 ORTHO05D008770 2.0e-38 162.5 114 64.0
RcHm_v2.0_Chr1g0337311 Rosa chinensis HOM05D007033 ORTHO05D008770 2.7e-38 162.2 111 68.5
Thecc.05G231700 Theobroma cacao HOM05D007033 ORTHO05D008770 2.7e-38 162.2 118 62.7
Actinidia21596 Actinidia chinensis HOM05D007033 ORTHO05D008770 4.5e-38 161.4 114 66.7
Haze_15805 Corylus avellana HOM05D007033 ORTHO05D008770 4.5e-38 161.4 112 65.2
Sp6g26610 Schrenkiella parvula HOM05D007033 ORTHO05D008770 4.5e-38 161.4 111 66.7
FvH4_7g07210 Fragaria vesca HOM05D007033 ORTHO05D008770 5.9e-38 161.0 111 68.5
FAN03G2679 Fragaria x ananassa HOM05D007033 ORTHO05D008770 5.9e-38 161.0 111 68.5
Nn3g19225 Nelumbo nucifera HOM05D007033 ORTHO05D008770 5.9e-38 161.0 114 65.8
Prupe.2G100000 Prunus persica HOM05D007033 ORTHO05D008770 5.9e-38 161.0 114 69.3
Sed0003013 Sechium edule HOM05D007033 ORTHO05D008770 7.7e-38 160.6 124 60.5
CANSAT35G1406 Cannabis sativa HOM05D007033 ORTHO05D008770 1.0e-37 160.2 114 63.2
arahy.Tifrunner.gnm1.ann1.14YBGE Arachis hypogaea HOM05D007033 ORTHO05D008770 1.7e-37 159.5 112 64.3
FAN06G3925 Fragaria x ananassa HOM05D007033 ORTHO05D008770 1.7e-37 159.5 111 67.6
AL6G28700 Arabidopsis lyrata HOM05D007033 ORTHO05D008770 2.3e-37 159.1 113 65.5
Hma1.2p1_0353F.1_g133340 Hydrangea macrophylla HOM05D007033 ORTHO05D008770 2.3e-37 159.1 111 66.7
arahy.Tifrunner.gnm1.ann1.GIK8C1 Arachis hypogaea HOM05D007033 ORTHO05D008770 2.9e-37 158.7 112 63.4
Glyma.07G123600 Glycine max HOM05D007033 ORTHO05D008770 2.9e-37 158.7 105 66.7
MD07G1078200 Malus domestica HOM05D007033 ORTHO05D008770 2.9e-37 158.7 115 66.1
Glyma.03G098200 Glycine max HOM05D007033 ORTHO05D008770 3.8e-37 158.3 119 62.2
Thhalv10014961m.g Eutrema salsugineum HOM05D007033 ORTHO05D008770 6.5e-37 157.5 111 64.9
Gohir.D13G100400 Gossypium hirsutum HOM05D007033 ORTHO05D008770 6.5e-37 157.5 117 60.7
Gorai.013G112100 Gossypium raimondii HOM05D007033 ORTHO05D008770 6.5e-37 157.5 117 60.7
CARHR195570 Cardamine hirsuta HOM05D007033 ORTHO05D008770 1.1e-36 156.8 96 70.8
Manes.08G157600 Manihot esculenta HOM05D007033 ORTHO05D008770 1.1e-36 156.8 125 59.2
VMungo0331G1478 Vigna mungo HOM05D007033 ORTHO05D008770 1.1e-36 156.8 113 65.5
Eucgr.E01772 Eucalyptus grandis HOM05D007033 ORTHO05D008770 1.5e-36 156.4 123 60.2
Lalb_Chr12g0210181 Lupinus albus HOM05D007033 ORTHO05D008770 2.5e-36 155.6 109 60.6
HPP92_003404 Vanilla planifolia HOM05D007033 ORTHO05D008770 2.5e-36 155.6 115 64.3
Gohir.A13G085300 Gossypium hirsutum HOM05D007033 ORTHO05D008770 4.2e-36 154.8 117 59.8
Aqoxy5G03237 Aquilegia oxysepala HOM05D007033 ORTHO05D008770 5.5e-36 154.5 97 70.1
Migut.B01441 Erythranthe guttata HOM05D007033 ORTHO05D008770 5.5e-36 154.5 116 58.6
Lj3g0004375 Lotus japonicus HOM05D007033 ORTHO05D008770 5.5e-36 154.5 96 69.8
MD02G1238400 Malus domestica HOM05D007033 ORTHO05D008770 5.5e-36 154.5 110 65.5
Phvul.010G038500 Phaseolus vulgaris HOM05D007033 ORTHO05D008770 5.5e-36 154.5 113 63.7
THA.LOC104827245 Tarenaya hassleriana HOM05D007033 ORTHO05D008770 5.5e-36 154.5 105 67.6
AT5G17610 Arabidopsis thaliana HOM05D007033 ORTHO05D008770 7.2e-36 154.1 113 62.8
HPP92_003427 Vanilla planifolia HOM05D007033 ORTHO05D008770 7.2e-36 154.1 114 63.2
Potri.013G073100 Populus trichocarpa HOM05D007033 ORTHO05D008770 9.5e-36 153.7 114 63.2
Sed0002871 Sechium edule HOM05D007033 ORTHO05D008770 2.1e-35 152.5 113 61.1
BcaC04g18775 Brassica carinata HOM05D007033 ORTHO05D008770 3.6e-35 151.8 112 64.3
C09p59560 Brassica napus HOM05D007033 ORTHO05D008770 3.6e-35 151.8 112 64.3
BolC9t58794H Brassica oleracea HOM05D007033 ORTHO05D008770 3.6e-35 151.8 112 64.3
CiPaw.02G048600 Carya illinoinensis HOM05D007033 ORTHO05D008770 3.6e-35 151.8 112 64.3
ECA234G3633 Erigeron canadensis HOM05D007033 ORTHO05D008770 8.0e-35 150.6 120 58.3
PSO782G0028 Papaver somniferum HOM05D007033 ORTHO05D008770 8.0e-35 150.6 114 58.8
PSO063G1631 Papaver somniferum HOM05D007033 ORTHO05D008770 1.0e-34 150.2 114 58.8
vmacro21112 Vaccinium macrocarpon HOM05D007033 ORTHO05D008770 1.0e-34 150.2 89 75.3
EL10Ac1g00673 Beta vulgaris HOM05D007033 ORTHO05D008770 1.4e-34 149.8 112 64.3
TPR.G17361 Trifolium pratense HOM05D007033 ORTHO05D008770 1.8e-34 149.4 118 57.6
CDE12G0505 Ceratophyllum demersum HOM05D007033 ORTHO05D008770 3.0e-34 148.7 119 58.0
Sc23g0004770 Simmondsia chinensis HOM05D007033 ORTHO05D008770 4.0e-34 148.3 103 67.0
HanXRQChr03g0088201 Helianthus annuus HOM05D007033 ORTHO05D008770 8.9e-34 147.1 112 60.7
Lsat_1_v5_gn_4_42281 Lactuca sativa HOM05D007033 ORTHO05D008770 4.4e-33 144.8 111 59.5
QL04p052404 Quercus lobata HOM05D007033 ORTHO05D008770 5.7e-33 144.4 89 73.0
SalBow5G2417 Salvia bowleyana HOM05D007033 ORTHO05D008770 5.7e-33 144.4 108 62.0
SGA_v2.0_scaffold98G29399 Striga asiatica HOM05D007033 ORTHO05D008770 5.7e-33 144.4 143 52.4
MBI16_g43713_MAGBIO Magnolia biondii HOM05D007033 ORTHO05D008770 9.8e-33 143.7 95 66.3
Zm00001eb009070 Zea mays HOM05D007033 ORTHO05D008770 1.3e-32 143.3 115 58.3
COL.COLO4_08541 Corchorus olitorius HOM05D007033 ORTHO05D008770 2.8e-32 142.1 101 65.3
Cfa003682 Carpinus fangiana HOM05D007033 ORTHO05D008770 1.8e-31 139.4 130 53.1
Hund17162 Selenicereus undatus HOM05D007033 ORTHO05D008770 3.1e-31 138.7 118 55.9
Sabra13G0063200 Salix brachista HOM05D007033 ORTHO05D008770 4.5e-30 134.8 99 61.6
Psat4g215800 Pisum sativum HOM05D007033 ORTHO05D008770 7.8e-30 134.0 105 61.0
unitig_8.g3853 Utricularia gibba HOM05D007033 ORTHO05D008770 1.3e-29 133.3 107 55.1
Sc23g0004660 Simmondsia chinensis HOM05D007033 ORTHO05D008770 5.6e-28 127.9 109 60.6
MBI16_g43476_MAGBIO Magnolia biondii HOM05D007033 ORTHO05D008770 9.5e-28 127.1 114 55.3
Ah.05g177250 Amaranthus hybridus HOM05D007033 ORTHO05D008770 5.2e-26 121.3 107 57.0
ATR0829G185 Amborella trichopoda HOM05D007033 ORTHO05D008770 5.2e-26 121.3 80 67.5
BraA10t44240Z Brassica rapa HOM05D007033 ORTHO05D008770 5.2e-26 121.3 99 60.6
AUR62014520 Chenopodium quinoa HOM05D007033 ORTHO05D008770 8.9e-26 120.6 93 65.6
HPP92_025932 Vanilla planifolia HOM05D007033 ORTHO05D008770 1.5e-25 119.8 111 52.3
AUR62038014 Chenopodium quinoa HOM05D007033 ORTHO05D008770 7.5e-25 117.5 93 64.5
SEGI_14041 Sequoiadendron giganteum HOM05D007033 ORTHO05D008770 8.3e-24 114.0 101 54.5
AagrBONN_evm.TU.Sc2ySwM_368.1536 Anthoceros agrestis HOM05D007033 ORTHO05D008770 1.5e-20 103.2 80 51.2
Pp3c19_9960 Physcomitrium patens HOM05D007033 ORTHO05D008770 1.6e-19 99.8 105 44.8
Pp3c18_1710 Physcomitrium patens HOM05D007033 ORTHO05D008770 8.0e-19 97.4 107 43.9
SMO351G0381 Selaginella moellendorffii HOM05D007033 ORTHO05D008770 5.2e-18 94.7 112 41.1
Pp3c7_5640 Physcomitrium patens HOM05D007033 ORTHO05D008770 6.8e-18 94.4 68 54.4
Mapoly0058s0110 Marchantia polymorpha HOM05D007033 ORTHO05D008770 2.0e-17 92.8 100 47.0
A10p21800 Brassica napus HOM05D007033 ORTHO05D008770 5.8e-17 91.3 52 73.1
TAR629G3499 Trochodendron aralioides HOM05D007033 ORTHO05D008770 4.1e-15 85.1 53 66.0
Sopen05g015510 Solanum pennellii HOM05D007033 ORTHO05D008770 5.4e-15 84.7 48 79.2
Atru.chr2.1689 Acer truncatum HOM05D007033 ORTHO05D008770 1.3e-13 80.1 42 83.3
Peaxi162Scf00117g01735 Petunia axillaris HOM05D007033 ORTHO05D008770 9.5e-12 73.9 84 47.6
MCO10G230 Micromonas commoda HOM05D007033 ORTHO05D008770 4.9e-08 61.6 96 32.3
PRCOL_00006026 Prasinoderma coloniale HOM05D007033 ORTHO05D008770 1.4e-07 60.1 42 54.8
CBR_g44313 Chara braunii HOM05D007033 ORTHO05D008770 3.2e-07 58.9 67 40.3
CBR_g49607 Chara braunii HOM05D007033 ORTHO05D008770 7.1e-07 57.8 67 38.8


User provided reference genes

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