Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc01g080950.3 Solanum lycopersicum HOM05D008143 ORTHO05D010256 2.0e-47 192.2 105 100.0
Sopen01g032540 Solanum pennellii HOM05D008143 ORTHO05D010256 7.2e-45 183.7 105 96.2
PGSC0003DMG400001819 Solanum tuberosum HOM05D008143 ORTHO05D010256 3.7e-41 171.4 105 90.5
CAN.G700.4 Capsicum annuum HOM05D008143 ORTHO05D010256 2.1e-28 129.0 102 75.5
Oeu020235.1 Olea europaea HOM05D008143 ORTHO05D010256 6.1e-20 100.9 101 64.4
Nitab4.5_0001209g0030 Nicotiana tabacum HOM05D008143 ORTHO05D010256 1.0e-19 100.1 103 64.1
Migut.N01814 Erythranthe guttata HOM05D008143 ORTHO05D010256 1.8e-19 99.4 102 61.8
Peaxi162Scf01110g00012 Petunia axillaris HOM05D008143 ORTHO05D010256 4.0e-19 98.2 106 61.3
Cc02_g26140 Coffea canephora HOM05D008143 ORTHO05D010256 2.0e-18 95.9 87 65.5
Dinv43557 Davidia involucrata HOM05D008143 ORTHO05D010256 7.5e-18 94.0 126 53.2
Dinv43549 Davidia involucrata HOM05D000307 ORTHO05D010256 1.3e-17 93.2 105 61.0
Hma1.2p1_0076F.1_g039560 Hydrangea macrophylla HOM05D008143 ORTHO05D010256 1.1e-16 90.1 132 50.8
HanXRQChr01g0020571 Helianthus annuus HOM05D008143 ORTHO05D010256 2.4e-16 89.0 81 61.7
SGA_v2.0_scaffold4G02202 Striga asiatica HOM05D008143 ORTHO05D010256 2.4e-16 89.0 78 69.2
Dinv43993 Davidia involucrata HOM05D008143 ORTHO05D010256 7.0e-16 87.4 94 59.6
Medtr7g034335 Medicago truncatula HOM05D008143 ORTHO05D010256 9.1e-16 87.0 93 57.0
CiPaw.14G012000 Carya illinoinensis HOM05D008143 ORTHO05D010256 1.2e-15 86.7 82 64.6
Migut.N01697 Erythranthe guttata HOM05D008143 ORTHO05D010256 2.0e-15 85.9 70 72.9
MSTRG.28120 Avicennia marina HOM05D008143 ORTHO05D010256 3.5e-15 85.1 61 82.0
GSVIVG01026763001 Vitis vinifera HOM05D008143 ORTHO05D010256 4.5e-15 84.7 74 67.6
Lj1g0022952 Lotus japonicus HOM05D008143 ORTHO05D010256 5.9e-15 84.3 99 52.5
Ca_26206_v3 Cicer arietinum L. HOM05D008143 ORTHO05D010256 1.7e-14 82.8 70 67.1
ECA248G2885 Erigeron canadensis HOM05D008143 ORTHO05D010256 2.2e-14 82.4 85 57.6
Psat3g161880 Pisum sativum HOM05D008143 ORTHO05D010256 6.5e-14 80.9 81 58.0
Ciclev10023977m.g Citrus clementina HOM05D008143 ORTHO05D010256 1.1e-13 80.1 75 66.7
PGR042G2567 Punica granatum HOM05D008143 ORTHO05D010256 1.1e-13 80.1 91 56.0
Atru.chr5.8 Acer truncatum HOM05D008143 ORTHO05D010256 1.5e-13 79.7 82 61.0
Sed0007849 Sechium edule HOM05D000473 ORTHO05D009707 1.9e-13 79.3 99 53.5
Cpa.g.sc41.41 Carica papaya HOM05D008143 ORTHO05D010256 3.2e-13 78.6 101 53.5
QL04p024258 Quercus lobata HOM05D008143 ORTHO05D010256 3.2e-13 78.6 120 48.3
CiPaw.13G019200 Carya illinoinensis HOM05D008143 ORTHO05D010256 9.5e-13 77.0 84 54.8
Aqoxy3G02407 Aquilegia oxysepala HOM05D008143 ORTHO05D010256 1.2e-12 76.6 111 48.6
Prupe.2G109300 Prunus persica HOM05D008143 ORTHO05D010256 1.6e-12 76.3 108 49.1
SHI04152 Sapria himalayana HOM05D008143 ORTHO05D010256 1.6e-12 76.3 104 54.8
ClCG05G002660 Citrullus lanatus HOM05D008143 ORTHO05D010256 1.4e-11 73.2 90 55.6
MELO3C006232.2 Cucumis melo HOM05D008143 ORTHO05D010256 1.4e-11 73.2 90 55.6
CsaV3_3G010110 Cucumis sativus L. HOM05D008143 ORTHO05D010256 1.4e-11 73.2 90 54.4
MD00G1098100 Malus domestica HOM05D008143 ORTHO05D010256 1.4e-11 73.2 105 49.5
Glyma.04G128500 Glycine max HOM05D008143 ORTHO05D010256 1.8e-11 72.8 94 50.0
TWI59G0267 Tripterygium wilfordii HOM05D008143 ORTHO05D010256 1.8e-11 72.8 75 56.0
Sed0022797 Sechium edule HOM05D008143 ORTHO05D010256 3.0e-11 72.0 86 55.8
Glyma.06G310300 Glycine max HOM05D008143 ORTHO05D010256 5.2e-11 71.2 103 46.6
Sabra14G0137200 Salix brachista HOM05D008143 ORTHO05D010256 5.2e-11 71.2 70 61.4
TAR636G2193 Trochodendron aralioides HOM05D008143 ORTHO05D010256 6.8e-11 70.9 119 46.2
Sabra14G0139000 Salix brachista HOM05D008143 ORTHO05D010256 2.0e-10 69.3 70 60.0
arahy.Tifrunner.gnm1.ann1.H93UBA Arachis hypogaea HOM05D008143 ORTHO05D010256 4.4e-10 68.2 105 49.5
FAN10G1551 Fragaria x ananassa HOM05D008143 ORTHO05D010256 5.7e-10 67.8 106 49.1
Actinidia21604 Actinidia chinensis HOM05D008143 ORTHO05D010256 7.5e-10 67.4 103 44.7
DCAR_015763 Daucus carota HOM05D008143 ORTHO05D010256 7.5e-10 67.4 70 64.3
arahy.Tifrunner.gnm1.ann1.3N3IDJ Arachis hypogaea HOM05D008143 ORTHO05D010256 1.3e-09 66.6 105 48.6
FvH4_7g08030 Fragaria vesca HOM05D008143 ORTHO05D010256 1.3e-09 66.6 106 47.2
FAN01G0067 Fragaria x ananassa HOM05D008143 ORTHO05D010256 1.3e-09 66.6 106 47.2
RcHm_v2.0_Chr1g0341271 Rosa chinensis HOM05D008143 ORTHO05D010256 2.8e-09 65.5 111 45.0
FAN03G3180 Fragaria x ananassa HOM05D008143 ORTHO05D010256 4.9e-09 64.7 106 47.2
AUR62023336 Chenopodium quinoa HOM05D008143 ORTHO05D010256 8.3e-09 63.9 63 63.5
Potri.014G178900 Populus trichocarpa HOM05D008143 ORTHO05D010256 8.3e-09 63.9 70 55.7
Duzib128G1063 Durio zibethinus HOM05D008143 ORTHO05D010256 1.1e-08 63.5 66 57.6
Phvul.005G016300 Phaseolus vulgaris HOM05D008143 ORTHO05D010256 1.4e-08 63.2 75 49.3
PSO017G2691 Papaver somniferum HOM05D008143 ORTHO05D010256 1.8e-08 62.8 69 53.6
Lalb_Chr19g0126471 Lupinus albus HOM05D008143 ORTHO05D010256 4.1e-08 61.6 97 46.4
Nn1g00548 Nelumbo nucifera HOM05D008143 ORTHO05D010256 4.1e-08 61.6 106 42.5
Nn6g33614 Nelumbo nucifera HOM05D008143 ORTHO05D010256 2.7e-07 58.9 69 53.6
Thecc.10G157800 Theobroma cacao HOM05D008143 ORTHO05D010256 2.7e-07 58.9 95 44.2
MD02G1236800 Malus domestica HOM05D008143 ORTHO05D010256 2.3e-06 55.8 45 68.9
Sabra05G0099100 Salix brachista HOM05D008143 ORTHO05D010256 3.8e-06 55.1 61 57.4
Haze_02941 Corylus avellana HOM05D008143 ORTHO05D010256 8.6e-06 53.9 62 53.2


User provided reference genes

Program Settings