Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc01g080890.2 Solanum lycopersicum HOM05D007785 ORTHO05D008997 9.6e-37 156.4 82 100.0
Sopen01g032480 Solanum pennellii HOM05D007785 ORTHO05D008997 6.9e-35 150.2 82 96.3
PGSC0003DMG400001700 Solanum tuberosum HOM05D007785 ORTHO05D008997 3.2e-32 141.4 82 91.5
Nitab4.5_0001476g0130 Nicotiana tabacum HOM05D007785 ORTHO05D008997 4.5e-26 120.9 85 78.8
Peaxi162Scf01144g00004 Petunia axillaris HOM05D007785 ORTHO05D008997 1.1e-24 116.3 84 75.0
Nitab4.5_0003887g0040 Nicotiana tabacum HOM05D007785 ORTHO05D008997 2.3e-22 108.6 72 81.9
Peaxi162Scf00901g00032 Petunia axillaris HOM05D007785 ORTHO05D008997 6.7e-22 107.1 76 75.0
Nitab4.5_0006705g0010 Nicotiana tabacum HOM05D007785 ORTHO05D008997 4.0e-19 97.8 82 74.4
Nitab4.5_0000166g0090 Nicotiana tabacum HOM05D007785 ORTHO05D008997 5.3e-19 97.4 82 74.4
CiPaw.13G020000 Carya illinoinensis HOM05D007785 ORTHO05D008997 3.0e-14 81.6 85 55.3
CSS0006779 Camellia sinensis var. sinensis HOM05D007785 ORTHO05D008997 2.5e-13 78.6 76 53.9
Cc02_g26020 Coffea canephora HOM05D007785 ORTHO05D008997 5.7e-13 77.4 76 56.6
Hma1.2p1_0021F.1_g014470 Hydrangea macrophylla HOM05D007785 ORTHO05D008997 4.8e-12 74.3 87 54.0
QL04p025073 Quercus lobata HOM05D007785 ORTHO05D008997 4.8e-12 74.3 85 51.8
Actinidia05806 Actinidia chinensis HOM05D007785 ORTHO05D008997 6.2e-12 73.9 83 53.0
MSTRG.17094 Avicennia marina HOM05D007785 ORTHO05D008997 1.1e-11 73.2 76 55.3
Dinv43998 Davidia involucrata HOM05D007785 ORTHO05D008997 1.8e-11 72.4 68 57.4
DCAR_025013 Daucus carota HOM05D007785 ORTHO05D008997 5.3e-11 70.9 76 52.6
Hma1.2p1_0601F.1_g187290 Hydrangea macrophylla HOM05D007785 ORTHO05D008997 9.0e-11 70.1 85 55.3
Haze_02930 Corylus avellana HOM05D007785 ORTHO05D008997 1.2e-10 69.7 76 55.3
ECA234G3743 Erigeron canadensis HOM05D007785 ORTHO05D008997 1.2e-10 69.7 85 51.8
Migut.N01702 Erythranthe guttata HOM05D007785 ORTHO05D008997 1.2e-10 69.7 86 48.8
Oeu021958.1 Olea europaea HOM05D007785 ORTHO05D008997 1.5e-10 69.3 76 52.6
CSS0013282 Camellia sinensis var. sinensis HOM05D007785 ORTHO05D008997 2.6e-10 68.6 76 53.9
RcHm_v2.0_Chr1g0341401 Rosa chinensis HOM05D007785 ORTHO05D008997 3.4e-10 68.2 83 53.0
SalBow5G3019 Salvia bowleyana HOM05D007785 ORTHO05D008997 4.5e-10 67.8 76 53.9
MD02G1229100 Malus domestica HOM05D007785 ORTHO05D008997 7.6e-10 67.0 85 52.9
Migut.B01462 Erythranthe guttata HOM05D007785 ORTHO05D008997 1.7e-09 65.9 77 53.2
HanXRQChr16g0520951 Helianthus annuus HOM05D007785 ORTHO05D008997 1.7e-09 65.9 82 47.6
Atru.chr5.15 Acer truncatum HOM05D007785 ORTHO05D008997 2.2e-09 65.5 76 50.0
Sabra01G0113200 Salix brachista HOM05D007785 ORTHO05D008997 2.9e-09 65.1 82 45.1
SalBow4G1855 Salvia bowleyana HOM05D007785 ORTHO05D008997 2.9e-09 65.1 78 50.0
FAN01G0084 Fragaria x ananassa HOM05D007785 ORTHO05D008997 5.0e-09 64.3 85 51.8
Nn1g00585 Nelumbo nucifera HOM05D007785 ORTHO05D008997 5.0e-09 64.3 85 49.4
Rhsim01G0145700 Rhododendron simsii HOM05D007785 ORTHO05D008997 8.4e-09 63.5 95 49.5
FvH4_7g07910 Fragaria vesca HOM05D007785 ORTHO05D008997 1.1e-08 63.2 85 51.8
FAN06G1471 Fragaria x ananassa HOM05D007785 ORTHO05D008997 1.1e-08 63.2 85 51.8
FAN10G3075 Fragaria x ananassa HOM05D007785 ORTHO05D008997 1.1e-08 63.2 85 51.8
Gohir.A13G011800 Gossypium hirsutum HOM05D007785 ORTHO05D008997 1.1e-08 63.2 83 47.0
Lalb_Chr09g0329531 Lupinus albus HOM05D007785 ORTHO05D008997 1.4e-08 62.8 74 51.4
Potri.001G145066 Populus trichocarpa HOM05D007785 ORTHO05D008997 1.4e-08 62.8 76 48.7
Sed0022240 Sechium edule HOM05D007785 ORTHO05D008997 1.9e-08 62.4 92 50.0
Gorai.013G013800 Gossypium raimondii HOM05D007785 ORTHO05D008997 5.5e-08 60.8 81 46.9
MD07G1083000 Malus domestica HOM05D007785 ORTHO05D008997 5.5e-08 60.8 85 50.6
FAN03G1138 Fragaria x ananassa HOM05D007785 ORTHO05D008997 9.3e-08 60.1 85 50.6
Gohir.D13G012700 Gossypium hirsutum HOM05D007785 ORTHO05D008997 9.3e-08 60.1 81 46.9
Oeu024374.1 Olea europaea HOM05D007785 ORTHO05D008997 9.3e-08 60.1 92 45.7
Thecc.03G232200 Theobroma cacao HOM05D012518 ORTHO05D008997 9.3e-08 60.1 76 48.7
TAR636G3686 Trochodendron aralioides HOM05D007785 ORTHO05D008997 1.2e-07 59.7 80 43.8
Potri.003G089100 Populus trichocarpa HOM05D007785 ORTHO05D008997 2.1e-07 58.9 77 45.5
Aqoxy3G02467 Aquilegia oxysepala HOM05D007785 ORTHO05D008997 2.7e-07 58.5 81 49.4
Manes.15G169900 Manihot esculenta HOM05D007785 ORTHO05D008997 3.5e-07 58.2 78 51.3
TAR375G1071 Trochodendron aralioides HOM05D007785 ORTHO05D008997 3.5e-07 58.2 71 49.3
Lalb_Chr05g0214041 Lupinus albus HOM05D007785 ORTHO05D008997 4.6e-07 57.8 74 50.0
TAR374G0344 Trochodendron aralioides HOM05D007785 ORTHO05D008997 4.6e-07 57.8 76 46.1
vmacro21104 Vaccinium macrocarpon HOM05D008336 ORTHO05D008997 6.1e-07 57.4 105 42.9
Glyma.17G153500 Glycine max HOM05D007785 ORTHO05D008997 7.9e-07 57.0 75 54.7
VMungo0251G2587 Vigna mungo HOM05D007785 ORTHO05D008997 7.9e-07 57.0 74 52.7
Ciclev10033202m.g Citrus clementina HOM05D007785 ORTHO05D008997 1.8e-06 55.8 72 48.6
Glyma.01G199900 Glycine max HOM05D007785 ORTHO05D008997 1.8e-06 55.8 74 45.9
Glyma.05G113700 Glycine max HOM05D007785 ORTHO05D008997 1.8e-06 55.8 74 51.4
Glyma.11G042100 Glycine max HOM05D007785 ORTHO05D008997 3.0e-06 55.1 74 45.9
ClCG05G002700 Citrullus lanatus HOM05D007785 ORTHO05D008997 3.9e-06 54.7 94 45.7
Lj4g0027032 Lotus japonicus HOM05D007785 ORTHO05D008997 3.9e-06 54.7 75 50.7
Phvul.003G229200 Phaseolus vulgaris HOM05D007785 ORTHO05D008997 6.7e-06 53.9 74 50.0
Prupe.2G109900 Prunus persica HOM05D007785 ORTHO05D008997 8.7e-06 53.5 86 43.0


User provided reference genes

Program Settings