Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc01g080830.3 Solanum lycopersicum HOM05D006977 ORTHO05D008738 1.1e-116 423.3 216 100.0
Sopen01g030650 Solanum pennellii HOM05D006977 ORTHO05D008738 5.5e-92 341.3 181 96.7
PGSC0003DMG400001120 Solanum tuberosum HOM05D006977 ORTHO05D008738 1.3e-88 330.1 177 95.5
CAN.G100.60 Capsicum annuum HOM05D006977 ORTHO05D008738 4.4e-57 225.3 124 88.7
Peaxi162Scf00309g00082 Petunia axillaris HOM05D006977 ORTHO05D008738 4.6e-54 215.3 122 86.9
Nitab4.5_0003092g0050 Nicotiana tabacum HOM05D006977 ORTHO05D008738 4.4e-49 198.7 137 73.0
Nitab4.5_0000222g0410 Nicotiana tabacum HOM05D006977 ORTHO05D008738 2.5e-44 183.0 109 80.7
CSS0050251 Camellia sinensis var. sinensis HOM05D006977 ORTHO05D008738 6.2e-43 178.3 157 61.1
Dinv12080 Davidia involucrata HOM05D006977 ORTHO05D008738 5.2e-42 175.3 150 61.3
Actinidia25872 Actinidia chinensis HOM05D006977 ORTHO05D008738 1.3e-40 170.6 154 59.7
Cc04_g01560 Coffea canephora HOM05D006977 ORTHO05D008738 1.3e-40 170.6 148 60.8
DCAR_012297 Daucus carota HOM05D006977 ORTHO05D008738 1.3e-40 170.6 181 51.4
Haze_05149 Corylus avellana HOM05D006977 ORTHO05D008738 2.9e-40 169.5 146 63.0
Cfa004914 Carpinus fangiana HOM05D006977 ORTHO05D008738 3.8e-40 169.1 161 59.6
Cpa.g.sc112.76 Carica papaya HOM05D006977 ORTHO05D008738 1.1e-39 167.5 152 61.2
Ca_17328_v3 Cicer arietinum L. HOM05D006977 ORTHO05D008738 4.2e-39 165.6 147 59.9
Lalb_Chr11g0071671 Lupinus albus HOM05D006977 ORTHO05D008738 7.1e-39 164.9 146 61.0
Ciclev10022352m.g Citrus clementina HOM05D006977 ORTHO05D008738 1.6e-38 163.7 171 56.1
Hma1.2p1_0484F.1_g162990 Hydrangea macrophylla HOM05D006977 ORTHO05D008738 1.6e-38 163.7 171 53.8
Prupe.3G002600 Prunus persica HOM05D006977 ORTHO05D008738 1.6e-38 163.7 164 56.1
TAR362G0624 Trochodendron aralioides HOM05D006977 ORTHO05D008738 1.6e-38 163.7 159 57.2
Thecc.01G325400 Theobroma cacao HOM05D006977 ORTHO05D008738 2.1e-38 163.3 152 59.9
GSVIVG01028248001 Vitis vinifera HOM05D006977 ORTHO05D008738 2.7e-38 162.9 174 54.0
Cpa.g.sc57.16 Carica papaya HOM05D006977 ORTHO05D008738 6.0e-38 161.8 152 58.6
QL05p057365 Quercus lobata HOM05D006977 ORTHO05D008738 6.0e-38 161.8 170 57.1
Lsat_1_v5_gn_7_107761 Lactuca sativa HOM05D006977 ORTHO05D008738 7.8e-38 161.4 158 57.0
Rhsim01G0293500 Rhododendron simsii HOM05D006977 ORTHO05D008738 7.8e-38 161.4 153 56.9
Sabra14G0082500 Salix brachista HOM05D006977 ORTHO05D008738 7.8e-38 161.4 146 60.3
TWI81G0461 Tripterygium wilfordii HOM05D006977 ORTHO05D008738 1.7e-37 160.2 152 59.2
Phvul.L002843 Phaseolus vulgaris HOM05D006977 ORTHO05D008738 3.0e-37 159.5 151 57.6
RcHm_v2.0_Chr3g0485771 Rosa chinensis HOM05D006977 ORTHO05D008738 3.0e-37 159.5 163 54.6
VMungo0720G2811 Vigna mungo HOM05D006977 ORTHO05D008738 3.0e-37 159.5 176 52.3
MSTRG.6995 Avicennia marina HOM05D006977 ORTHO05D008738 3.9e-37 159.1 147 57.8
Potri.014G112200 Populus trichocarpa HOM05D006977 ORTHO05D008738 3.9e-37 159.1 146 61.0
Glyma.04G053700 Glycine max HOM05D006977 ORTHO05D008738 5.1e-37 158.7 150 58.7
Manes.05G008900 Manihot esculenta HOM05D006977 ORTHO05D008738 5.1e-37 158.7 156 58.3
Hund02455 Selenicereus undatus HOM05D006977 ORTHO05D008738 5.1e-37 158.7 143 53.8
Medtr8g103265 Medicago truncatula HOM05D006977 ORTHO05D008738 1.5e-36 157.1 149 57.0
CiPaw.08G082500 Carya illinoinensis HOM05D006977 ORTHO05D008738 1.9e-36 156.8 153 58.8
Lj5g0006261 Lotus japonicus HOM05D006977 ORTHO05D008738 3.3e-36 156.0 146 56.2
Nn4g24845 Nelumbo nucifera HOM05D006977 ORTHO05D008738 3.3e-36 156.0 184 50.0
Psat7g015240 Pisum sativum HOM05D006977 ORTHO05D008738 3.3e-36 156.0 147 57.1
ECA236G2063 Erigeron canadensis HOM05D006977 ORTHO05D008738 4.3e-36 155.6 146 57.5
Glyma.10G137900 Glycine max HOM05D006977 ORTHO05D008738 4.3e-36 155.6 149 58.4
Eucgr.A01003 Eucalyptus grandis HOM05D006977 ORTHO05D008738 5.6e-36 155.2 146 58.9
MBI19_g30288_MAGBIO Magnolia biondii HOM05D006977 ORTHO05D008738 5.6e-36 155.2 169 50.9
HanXRQChr15g0493961 Helianthus annuus HOM05D006977 ORTHO05D008738 7.3e-36 154.8 164 54.9
Migut.M01655 Erythranthe guttata HOM05D006977 ORTHO05D008738 9.6e-36 154.5 164 53.7
COL.COLO4_23128 Corchorus olitorius HOM05D006977 ORTHO05D008738 1.6e-35 153.7 138 60.9
SalBow5G4120 Salvia bowleyana HOM05D006977 ORTHO05D008738 3.6e-35 152.5 160 52.5
Carub.0006s3543 Capsella rubella HOM05D006977 ORTHO05D008738 4.8e-35 152.1 161 48.4
PSO357G0421 Papaver somniferum HOM05D006977 ORTHO05D008738 4.8e-35 152.1 146 54.8
Atru.chr5.861 Acer truncatum HOM05D006977 ORTHO05D008738 8.1e-35 151.4 173 52.6
FAN23G2129 Fragaria x ananassa HOM05D006977 ORTHO05D008738 1.1e-34 151.0 158 55.1
Duzib133G0680 Durio zibethinus HOM05D006977 ORTHO05D008738 1.8e-34 150.2 165 54.5
Aa31LG5G1570 Aethionema arabicum HOM05D006977 ORTHO05D008738 2.4e-34 149.8 160 51.2
BcaC01g06803 Brassica carinata HOM05D006977 ORTHO05D008738 3.1e-34 149.4 136 54.4
C03p38480 Brassica napus HOM05D006977 ORTHO05D008738 3.1e-34 149.4 136 54.4
BolC3t16121H Brassica oleracea HOM05D006977 ORTHO05D008738 3.1e-34 149.4 136 54.4
CsaV3_5G018620 Cucumis sativus L. HOM05D006977 ORTHO05D008738 4.0e-34 149.1 149 57.0
Aqoxy5G02822 Aquilegia oxysepala HOM05D006977 ORTHO05D008738 5.3e-34 148.7 142 56.3
PSO170G4516 Papaver somniferum HOM05D006977 ORTHO05D008738 5.3e-34 148.7 146 52.7
Gohir.D11G109500 Gossypium hirsutum HOM05D006977 ORTHO05D008738 6.9e-34 148.3 159 52.8
Gorai.007G117100 Gossypium raimondii HOM05D006977 ORTHO05D008738 6.9e-34 148.3 159 52.8
MD09G1290400 Malus domestica HOM05D006977 ORTHO05D008738 6.9e-34 148.3 136 59.6
AT4G01790 Arabidopsis thaliana HOM05D006977 ORTHO05D008738 9.0e-34 147.9 153 49.7
FAN19G2776 Fragaria x ananassa HOM05D006977 ORTHO05D008738 9.0e-34 147.9 158 53.8
PGR042G1466 Punica granatum HOM05D006977 ORTHO05D008738 9.0e-34 147.9 145 54.5
ClCG01G007180 Citrullus lanatus HOM05D006977 ORTHO05D008738 1.5e-33 147.1 147 57.8
MELO3C005192.2 Cucumis melo HOM05D006977 ORTHO05D008738 1.5e-33 147.1 147 57.1
Gohir.A11G104700 Gossypium hirsutum HOM05D006977 ORTHO05D008738 1.5e-33 147.1 159 52.2
arahy.Tifrunner.gnm1.ann1.KP3I1I Arachis hypogaea HOM05D006977 ORTHO05D008738 2.0e-33 146.7 151 55.6
FAN26G0658 Fragaria x ananassa HOM05D006977 ORTHO05D008738 2.6e-33 146.4 158 53.2
vmacro15094 Vaccinium macrocarpon HOM05D006977 ORTHO05D008738 3.4e-33 146.0 132 57.6
BcaB01g02378 Brassica carinata HOM05D006977 ORTHO05D008738 4.5e-33 145.6 136 52.2
Lj1A7G42 Lonicera japonica HOM05D006977 ORTHO05D008738 4.5e-33 145.6 127 61.4
AUR62020194 Chenopodium quinoa HOM05D006977 ORTHO05D008738 5.8e-33 145.2 154 49.4
Thhalv10029024m.g Eutrema salsugineum HOM05D006977 ORTHO05D008738 5.8e-33 145.2 137 54.0
Sc02g0004000 Simmondsia chinensis HOM05D006977 ORTHO05D008738 5.8e-33 145.2 153 50.3
CARHR249760 Cardamine hirsuta HOM05D006977 ORTHO05D008738 7.6e-33 144.8 168 45.2
HPP92_012764 Vanilla planifolia HOM05D006977 ORTHO05D008738 1.3e-32 144.1 147 51.0
A03p31490 Brassica napus HOM05D006977 ORTHO05D008738 1.7e-32 143.7 136 52.9
BraA03t12329Z Brassica rapa HOM05D006977 ORTHO05D008738 1.7e-32 143.7 136 52.9
AUR62007556 Chenopodium quinoa HOM05D006977 ORTHO05D008738 6.4e-32 141.7 154 48.7
Sp3g31270 Schrenkiella parvula HOM05D006977 ORTHO05D008738 8.4e-32 141.4 139 51.1
SpUn0082_0020 Schrenkiella parvula HOM05D006977 ORTHO05D008738 8.4e-32 141.4 139 51.1
arahy.Tifrunner.gnm1.ann1.PT1J72 Arachis hypogaea HOM05D006977 ORTHO05D008738 1.1e-31 141.0 150 54.7
FAN28G2841 Fragaria x ananassa HOM05D006977 ORTHO05D008738 1.1e-31 141.0 153 53.6
AL6G51510 Arabidopsis lyrata HOM05D006977 ORTHO05D008738 1.4e-31 140.6 153 48.4
THA.LOC104799825 Tarenaya hassleriana HOM05D006977 ORTHO05D008738 1.9e-31 140.2 142 52.1
Duzib268G1378 Durio zibethinus HOM05D006977 ORTHO05D008738 2.4e-31 139.8 128 57.8
ATR0796G043 Amborella trichopoda HOM05D006977 ORTHO05D008738 3.2e-31 139.4 166 48.2
Sed0019401 Sechium edule HOM05D006977 ORTHO05D008738 5.4e-31 138.7 149 54.4
Duzib268G1723 Durio zibethinus HOM05D006977 ORTHO05D008738 1.2e-30 137.5 147 54.4
FvH4_1g26230 Fragaria vesca HOM05D006977 ORTHO05D008738 2.1e-30 136.7 146 53.4
Oeu031543.1 Olea europaea HOM05D006977 ORTHO05D008738 7.9e-30 134.8 156 49.4
SGA_v2.0_scaffold204G41642 Striga asiatica HOM05D006977 ORTHO05D008738 1.8e-29 133.7 157 49.7
CANSAT25G0488 Cannabis sativa HOM05D006977 ORTHO05D008738 3.9e-29 132.5 163 49.7
TPR.G23504 Trifolium pratense HOM05D006977 ORTHO05D008738 1.1e-28 131.0 115 59.1
unitig_8.g4039 Utricularia gibba HOM05D006977 ORTHO05D008738 2.8e-27 126.3 155 47.7
Os07g0636400 Oryza sativa ssp. japonica HOM05D006977 ORTHO05D008738 6.2e-27 125.2 146 45.2
Zm00001eb328690 Zea mays HOM05D006977 ORTHO05D008738 8.1e-27 124.8 145 45.5
Duzib268G1823 Durio zibethinus HOM05D006977 ORTHO05D008738 2.4e-26 123.2 128 55.5
EL10Ac6g15579 Beta vulgaris HOM05D006977 ORTHO05D008738 6.9e-26 121.7 135 48.1
CiPaw.07G125600 Carya illinoinensis HOM05D006977 ORTHO05D008738 2.6e-25 119.8 173 48.0
Sp6g01640 Schrenkiella parvula HOM05D006977 ORTHO05D008738 4.2e-23 112.5 105 50.5
CDE02G1393 Ceratophyllum demersum HOM05D006977 ORTHO05D008738 1.9e-15 87.0 75 54.7
MD17G1285100 Malus domestica HOM05D006977 ORTHO05D008738 1.9e-15 87.0 66 65.2
CDE04G2744 Ceratophyllum demersum HOM05D006977 ORTHO05D008738 8.2e-11 71.6 102 36.3
Mapoly0147s0029 Marchantia polymorpha HOM05D006977 ORTHO05D008738 1.3e-08 64.3 121 34.7
Pp3c20_22530 Physcomitrium patens HOM05D006977 ORTHO05D008738 1.1e-07 61.2 128 32.0
Duzib138G1646 Durio zibethinus HOM05D006977 ORTHO05D008738 2.7e-06 56.6 71 47.9


User provided reference genes

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