Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc01g080610.3 Solanum lycopersicum HOM05D006926 ORTHO05D008863 1.1e-240 836.3 424 100.0
PGSC0003DMG400006296 Solanum tuberosum HOM05D000011 ORTHO05D007164 1.3e-81 307.8 289 64.4
Sopen01g030780 Solanum pennellii HOM05D006926 ORTHO05D008863 3.4e-53 213.4 105 95.2
Solyc01g080720.4 Solanum lycopersicum HOM05D006926 ORTHO05D008863 5.8e-53 212.6 105 95.2
PGSC0003DMG400006295 Solanum tuberosum HOM05D006926 ORTHO05D008863 1.9e-51 207.6 105 91.4
Nitab4.5_0000059g0440 Nicotiana tabacum HOM05D006926 ORTHO05D008863 2.1e-50 204.1 117 82.1
Nitab4.5_0005852g0010 Nicotiana tabacum HOM05D006926 ORTHO05D008863 2.9e-44 183.7 109 78.9
PGSC0003DMG400035412 Solanum tuberosum HOM05D000896 ORTHO05D000594 4.9e-44 183.0 302 44.4
CAN.G185.37 Capsicum annuum HOM05D006926 ORTHO05D008863 1.2e-42 178.3 105 81.0
PGSC0003DMG400043436 Solanum tuberosum HOM05D000896 ORTHO05D000594 2.1e-42 177.6 293 43.3
Sopen11g001210 Solanum pennellii HOM05D000896 ORTHO05D000594 1.3e-39 168.3 266 45.9
Peaxi162Scf01123g00213 Petunia axillaris HOM05D006926 ORTHO05D008863 4.8e-39 166.4 105 73.3
Nitab4.5_0001582g0060 Nicotiana tabacum HOM05D000896 ORTHO05D000594 1.1e-38 165.2 297 42.1
Nitab4.5_0001681g0040 Nicotiana tabacum HOM05D000896 ORTHO05D000594 2.0e-37 161.0 294 40.1
Peaxi162Scf00765g00215 Petunia axillaris HOM05D000896 ORTHO05D000594 1.6e-26 124.8 225 40.4
CAN.G1140.8 Capsicum annuum HOM05D000896 ORTHO05D000594 3.6e-26 123.6 362 32.9
Peaxi162Scf00177g00063 Petunia axillaris HOM05D000896 ORTHO05D000594 4.3e-24 116.7 246 37.4
CAN.G476.8 Capsicum annuum HOM05D000896 ORTHO05D000594 5.7e-24 116.3 300 34.3
Peaxi162Scf01732g00010 Petunia axillaris HOM05D000896 ORTHO05D000594 4.8e-23 113.2 261 36.8
PGSC0003DMG400034363 Solanum tuberosum HOM05D000896 ORTHO05D000594 1.0e-20 105.5 209 39.7
Nitab4.5_0000320g0170 Nicotiana tabacum HOM05D000896 ORTHO05D000594 9.4e-19 99.0 137 45.3
Nitab4.5_0008084g0030 Nicotiana tabacum HOM05D000896 ORTHO05D000594 7.9e-18 95.9 94 59.6
Solyc11g005210.1 Solanum lycopersicum HOM05D000896 ORTHO05D000594 2.3e-17 94.4 79 67.1
Nitab4.5_0007441g0030 Nicotiana tabacum HOM05D000896 ORTHO05D000594 2.0e-13 81.3 87 59.8
Sopen11g001220 Solanum pennellii HOM05D000896 ORTHO05D000594 1.8e-09 68.2 191 36.6
Dinv40965 Davidia involucrata HOM05D000896 ORTHO05D000594 1.1e-08 65.5 80 47.5
Dinv08221 Davidia involucrata HOM05D000896 ORTHO05D000594 1.5e-08 65.1 80 47.5
Dinv40964 Davidia involucrata HOM05D000896 ORTHO05D000594 1.5e-08 65.1 80 47.5
Peaxi162Scf00168g00169 Petunia axillaris HOM05D000896 ORTHO05D000594 2.0e-08 64.7 82 46.3
QL06p009008 Quercus lobata HOM05D006926 ORTHO05D008863 2.0e-08 64.7 104 37.5
Sopen02g010570 Solanum pennellii HOM05D000896 ORTHO05D000594 2.2e-07 61.2 94 42.6
TWI09G0560 Tripterygium wilfordii HOM05D006926 ORTHO05D008863 2.8e-07 60.8 104 37.5
Sopen02g010630 Solanum pennellii HOM05D000896 ORTHO05D000594 6.3e-07 59.7 93 41.9
TWI34G0441 Tripterygium wilfordii HOM05D000896 ORTHO05D000594 1.1e-06 58.9 104 38.5
Actinidia23083 Actinidia chinensis HOM05D000896 ORTHO05D000594 1.8e-06 58.2 80 45.0
Nitab4.5_0011772g0030 Nicotiana tabacum HOM05D000896 ORTHO05D000594 1.8e-06 58.2 122 31.1
PGSC0003DMG400043561 Solanum tuberosum HOM05D000896 ORTHO05D000594 1.8e-06 58.2 93 40.9
Actinidia23084 Actinidia chinensis HOM05D000896 ORTHO05D000594 2.4e-06 57.8 80 45.0
Dinv21551 Davidia involucrata HOM05D000896 ORTHO05D000594 2.4e-06 57.8 82 41.5
Migut.G00155 Erythranthe guttata HOM05D006926 ORTHO05D008863 2.4e-06 57.8 104 32.7
Dinv21550 Davidia involucrata HOM05D000896 ORTHO05D000594 3.1e-06 57.4 82 41.5
Solyc02g032220.1 Solanum lycopersicum HOM05D000896 ORTHO05D000594 3.1e-06 57.4 78 43.6
Sopen02g010620 Solanum pennellii HOM05D000896 ORTHO05D000594 3.1e-06 57.4 100 41.0
SGA_v2.0_scaffold67G22630 Striga asiatica HOM05D006926 ORTHO05D008863 4.1e-06 57.0 103 35.9
Solyc02g032270.1 Solanum lycopersicum HOM05D000896 ORTHO05D000594 9.1e-06 55.8 100 40.0
Sopen02g010560 Solanum pennellii HOM05D000896 ORTHO05D000594 9.1e-06 55.8 117 33.3


User provided reference genes

Program Settings