Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc01g080330.4 Solanum lycopersicum HOM05D001150 ORTHO05D390125 2.3e-63 245.4 118 100.0
Sopen01g032130 Solanum pennellii HOM05D001150 ORTHO05D000998 4.6e-16 88.2 45 88.9
PGSC0003DMG400012777 Solanum tuberosum HOM05D001150 ORTHO05D000998 2.3e-15 85.9 45 86.7
Peaxi162Scf00095g00715 Petunia axillaris HOM05D001150 ORTHO05D000998 1.1e-14 83.6 45 82.2
Nitab4.5_0000059g0070 Nicotiana tabacum HOM05D001150 ORTHO05D000998 1.5e-14 83.2 45 82.2
Nitab4.5_0000535g0170 Nicotiana tabacum HOM05D001150 ORTHO05D000998 5.6e-14 81.3 45 82.2
CAN.G889.21 Capsicum annuum HOM05D001150 ORTHO05D000998 1.3e-13 80.1 45 84.4
Lj6A664T62 Lonicera japonica HOM05D001150 ORTHO05D000998 1.1e-09 67.0 59 62.7
Hma1.2p1_2025F.1_g311470 Hydrangea macrophylla HOM05D001150 ORTHO05D000998 1.9e-09 66.2 45 71.1
Dinv38358 Davidia involucrata HOM05D001150 ORTHO05D000998 7.1e-09 64.3 45 68.9
Dinv44464 Davidia involucrata HOM05D001150 ORTHO05D000998 2.1e-08 62.8 45 66.7
Actinidia40217 Actinidia chinensis HOM05D001150 ORTHO05D000998 3.5e-08 62.0 45 66.7
GSVIVG01017864001 Vitis vinifera HOM05D001150 ORTHO05D000998 7.9e-08 60.8 45 62.2
Actinidia23463 Actinidia chinensis HOM05D001150 ORTHO05D000998 1.0e-07 60.5 45 64.4
AUR62015307 Chenopodium quinoa HOM05D001150 ORTHO05D000998 2.3e-07 59.3 31 80.6
AUR62032746 Chenopodium quinoa HOM05D001150 ORTHO05D000998 2.3e-07 59.3 31 80.6
Prupe.1G148200 Prunus persica HOM05D001150 ORTHO05D000998 6.7e-07 57.8 68 48.5
Aqoxy2G03208 Aquilegia oxysepala HOM05D001150 ORTHO05D000998 8.7e-07 57.4 45 60.0
TAR633G0831 Trochodendron aralioides HOM05D001150 ORTHO05D000998 8.7e-07 57.4 45 62.2
EL10Ac3g06855 Beta vulgaris HOM05D001150 ORTHO05D000998 1.1e-06 57.0 31 77.4
MBI17_g17894_MAGBIO Magnolia biondii HOM05D001150 ORTHO05D000998 1.1e-06 57.0 45 60.0
CDE07G1902 Ceratophyllum demersum HOM05D001150 ORTHO05D000998 1.5e-06 56.6 50 52.0
Lsat_1_v5_gn_5_49321 Lactuca sativa HOM05D001150 ORTHO05D000998 1.9e-06 56.2 45 55.6
Nn4g26141 Nelumbo nucifera HOM05D001150 ORTHO05D000998 2.5e-06 55.8 45 62.2
Peaxi162Scf00152g01434 Petunia axillaris HOM05D001150 ORTHO05D000998 3.3e-06 55.5 52 44.2
Sc13g0003820 Simmondsia chinensis HOM05D001150 ORTHO05D000998 3.3e-06 55.5 46 56.5
HanXRQChr03g0079931 Helianthus annuus HOM05D001150 ORTHO05D000998 4.3e-06 55.1 66 45.5
MBI19_g39900_MAGBIO Magnolia biondii HOM05D001150 ORTHO05D000998 5.6e-06 54.7 45 60.0
Manes.03G187000 Manihot esculenta HOM05D001150 ORTHO05D000998 7.4e-06 54.3 48 62.5
MD13G1179700 Malus domestica HOM05D001150 ORTHO05D000998 9.6e-06 53.9 68 45.6
Rhsim04G0212000 Rhododendron simsii HOM05D001150 ORTHO05D000998 9.6e-06 53.9 71 43.7


User provided reference genes

Program Settings