Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc01g080100.3 Solanum lycopersicum HOM05D007677 ORTHO05D009728 1.3e-84 316.2 151 100.0
Sopen01g031880 Solanum pennellii HOM05D007677 ORTHO05D009728 3.9e-84 314.7 151 99.3
PGSC0003DMG400033121 Solanum tuberosum HOM05D007677 ORTHO05D009728 7.3e-83 310.5 152 98.7
Peaxi162Scf00196g00106 Petunia axillaris HOM05D007677 ORTHO05D009728 3.9e-76 288.1 155 89.7
Nitab4.5_0001247g0090 Nicotiana tabacum HOM05D007677 ORTHO05D009728 5.6e-67 257.7 152 82.9
Oeu037682.1 Olea europaea HOM05D007677 ORTHO05D009728 2.2e-63 245.7 147 80.3
Cc03_g03130 Coffea canephora HOM05D007677 ORTHO05D009728 1.0e-60 236.9 146 76.0
DCAR_030598 Daucus carota HOM05D007677 ORTHO05D009728 6.7e-60 234.2 146 73.3
Thecc.04G221700 Theobroma cacao HOM05D007677 ORTHO05D009728 7.4e-59 230.7 138 77.5
Nn1g02165 Nelumbo nucifera HOM05D007677 ORTHO05D009728 3.6e-58 228.4 147 72.8
Ciclev10006064m.g Citrus clementina HOM05D007677 ORTHO05D009728 4.8e-58 228.0 148 71.6
Manes.03G184600 Manihot esculenta HOM05D007677 ORTHO05D009728 6.2e-58 227.6 147 74.1
COL.COLO4_21648 Corchorus olitorius HOM05D007677 ORTHO05D009728 1.1e-57 226.9 141 74.5
SGA_v2.0_scaffold237G43825 Striga asiatica HOM05D007677 ORTHO05D009728 1.4e-57 226.5 154 68.2
CSS0026660 Camellia sinensis var. sinensis HOM05D007677 ORTHO05D009728 1.8e-57 226.1 145 75.2
Gohir.A02G031000 Gossypium hirsutum HOM05D007677 ORTHO05D009728 9.0e-57 223.8 139 74.8
Gohir.D02G037900 Gossypium hirsutum HOM05D007677 ORTHO05D009728 1.2e-56 223.4 139 74.8
Gorai.005G041800 Gossypium raimondii HOM05D007677 ORTHO05D009728 1.2e-56 223.4 139 74.8
RcHm_v2.0_Chr4g0418331 Rosa chinensis HOM05D007677 ORTHO05D009728 2.0e-56 222.6 138 76.8
QL06p004212 Quercus lobata HOM05D007677 ORTHO05D009728 2.6e-56 222.2 145 71.7
FvH4_4g14500 Fragaria vesca HOM05D007677 ORTHO05D009728 5.8e-56 221.1 138 76.1
FAN12G4178 Fragaria x ananassa HOM05D007677 ORTHO05D009728 5.8e-56 221.1 138 76.1
TWI09G0567 Tripterygium wilfordii HOM05D007677 ORTHO05D009728 5.8e-56 221.1 141 74.5
CiPaw.02G092500 Carya illinoinensis HOM05D007677 ORTHO05D009728 1.3e-55 219.9 146 71.2
Lj6P565T22 Lonicera japonica HOM05D007677 ORTHO05D009728 1.7e-55 219.5 145 70.3
CiPaw.01G160100 Carya illinoinensis HOM05D007677 ORTHO05D009728 2.9e-55 218.8 146 70.5
Duzib212G0325 Durio zibethinus HOM05D001530 ORTHO05D003676 3.8e-55 218.4 138 73.2
CANSAT78G2143 Cannabis sativa HOM05D007677 ORTHO05D009728 4.9e-55 218.0 140 75.7
FAN07G0089 Fragaria x ananassa HOM05D007677 ORTHO05D009728 8.4e-55 217.2 138 74.6
Glyma.15G104100 Glycine max HOM05D007677 ORTHO05D009728 8.4e-55 217.2 145 73.1
MD13G1183200 Malus domestica HOM05D007677 ORTHO05D009728 2.4e-54 215.7 141 72.3
MD16G1184100 Malus domestica HOM05D007677 ORTHO05D009728 2.4e-54 215.7 149 70.5
Medtr4g117270 Medicago truncatula HOM05D007677 ORTHO05D009728 1.2e-53 213.4 145 71.7
Phvul.003G092600 Phaseolus vulgaris HOM05D007677 ORTHO05D009728 1.2e-53 213.4 146 69.2
ClCG05G005440 Citrullus lanatus HOM05D007677 ORTHO05D009728 1.6e-53 213.0 144 68.8
MELO3C006567.2 Cucumis melo HOM05D007677 ORTHO05D009728 1.6e-53 213.0 145 68.3
Sabra10G0011000 Salix brachista HOM05D001530 ORTHO05D004168 1.6e-53 213.0 147 70.1
Glyma.17G017000 Glycine max HOM05D007677 ORTHO05D009728 2.7e-53 212.2 146 69.9
VMungo1215G2604 Vigna mungo HOM05D007677 ORTHO05D009728 2.7e-53 212.2 146 69.2
CSS0045125 Camellia sinensis var. sinensis HOM05D007677 ORTHO05D009728 6.0e-53 211.1 154 68.2
Prupe.1G151500 Prunus persica HOM05D007677 ORTHO05D009728 6.0e-53 211.1 140 74.3
CsaV3_3G013730 Cucumis sativus L. HOM05D007677 ORTHO05D009728 1.0e-52 210.3 145 68.3
Haze_00962 Corylus avellana HOM05D007677 ORTHO05D009728 1.8e-52 209.5 146 69.2
Eucgr.H03598 Eucalyptus grandis HOM05D007677 ORTHO05D009728 1.8e-52 209.5 150 68.7
Cfa015583 Carpinus fangiana HOM05D007677 ORTHO05D009728 5.1e-52 208.0 146 68.5
Lj4g0019321 Lotus japonicus HOM05D007677 ORTHO05D009728 5.1e-52 208.0 150 68.0
Migut.G00291 Erythranthe guttata HOM05D007677 ORTHO05D009728 1.1e-51 206.8 144 68.8
Glyma.13G208700 Glycine max HOM05D007677 ORTHO05D009728 1.1e-51 206.8 145 69.7
Aqoxy2G03269 Aquilegia oxysepala HOM05D007677 ORTHO05D009728 1.9e-51 206.1 153 63.4
vmacro08279 Vaccinium macrocarpon HOM05D007677 ORTHO05D009728 1.9e-51 206.1 153 66.0
Sed0011127 Sechium edule HOM05D007677 ORTHO05D009728 2.5e-51 205.7 145 66.9
TPR.G20115 Trifolium pratense HOM05D007677 ORTHO05D009728 5.6e-51 204.5 145 68.3
Phvul.006G153800 Phaseolus vulgaris HOM05D007677 ORTHO05D009728 7.4e-51 204.1 145 69.0
TAR633G1088 Trochodendron aralioides HOM05D007677 ORTHO05D009728 1.3e-50 203.4 159 62.3
PGR004G0596 Punica granatum HOM05D007677 ORTHO05D009728 3.7e-50 201.8 138 69.6
Ca_00644_v3 Cicer arietinum L. HOM05D007677 ORTHO05D009728 4.8e-50 201.4 147 68.7
Psat4g031560 Pisum sativum HOM05D007677 ORTHO05D009728 6.2e-50 201.1 143 65.7
arahy.Tifrunner.gnm1.ann1.PDVV0K Arachis hypogaea HOM05D007677 ORTHO05D009728 8.1e-50 200.7 146 68.5
arahy.Tifrunner.gnm1.ann1.UI8DPT Arachis hypogaea HOM05D007677 ORTHO05D009728 1.1e-49 200.3 146 68.5
PSO407G0046 Papaver somniferum HOM05D007677 ORTHO05D009728 1.4e-49 199.9 141 70.9
Lalb_Chr18g0056081 Lupinus albus HOM05D007677 ORTHO05D009728 1.8e-49 199.5 147 67.3
Ca_21594_v3 Cicer arietinum L. HOM05D007677 ORTHO05D009728 3.1e-49 198.7 145 62.8
PSO170G6325 Papaver somniferum HOM05D007677 ORTHO05D009728 3.1e-49 198.7 141 70.2
Medtr2g022190 Medicago truncatula HOM05D007677 ORTHO05D009728 6.9e-49 197.6 145 68.3
Glyma.07G257100 Glycine max HOM05D007677 ORTHO05D009728 1.5e-48 196.4 146 65.8
Lj6g0003442 Lotus japonicus HOM05D007677 ORTHO05D009728 1.5e-48 196.4 148 65.5
VMungo0540G0472 Vigna mungo HOM05D007677 ORTHO05D009728 7.6e-48 194.1 144 66.0
Sc13g0003990 Simmondsia chinensis HOM05D007677 ORTHO05D009728 1.0e-47 193.7 149 61.1
TPR.G30685 Trifolium pratense HOM05D007677 ORTHO05D009728 1.0e-47 193.7 145 65.5
AUR62030087 Chenopodium quinoa HOM05D007677 ORTHO05D007693 8.4e-47 190.7 132 70.5
CSS0000052 Camellia sinensis var. sinensis HOM05D007677 ORTHO05D009728 1.1e-46 190.3 143 67.8
Psat1g183560 Pisum sativum HOM05D007677 ORTHO05D009728 1.2e-45 186.8 152 63.2
Dinv38394 Davidia involucrata HOM05D007677 ORTHO05D009728 3.5e-45 185.3 135 67.4
THA.LOC104820106 Tarenaya hassleriana HOM05D001407 ORTHO05D001314 2.4e-41 172.6 141 59.6
C05p61090 Brassica napus HOM05D007677 ORTHO05D009728 7.6e-40 167.5 152 52.6
BolC5t34766H Brassica oleracea HOM05D007677 ORTHO05D009728 7.6e-40 167.5 152 52.6
Sp3g05100 Schrenkiella parvula HOM05D007677 ORTHO05D009728 1.7e-39 166.4 152 52.6
BcaC05g30051 Brassica carinata HOM05D007677 ORTHO05D009728 2.2e-39 166.0 152 52.0
A05p41840 Brassica napus HOM05D007677 ORTHO05D009728 2.2e-39 166.0 152 52.0
BraA05t22903Z Brassica rapa HOM05D007677 ORTHO05D009728 2.2e-39 166.0 152 52.0
BcaNung06667 Brassica carinata HOM05D007677 ORTHO05D009728 5.0e-39 164.9 152 52.0
AL3G17000 Arabidopsis lyrata HOM05D007677 ORTHO05D009728 2.5e-38 162.5 152 52.6
Carub.0003s0558 Capsella rubella HOM05D007677 ORTHO05D009728 2.1e-37 159.5 152 51.3
Aa31LG5G16660 Aethionema arabicum HOM05D007677 ORTHO05D009728 2.7e-37 159.1 146 54.1
CARHR080660 Cardamine hirsuta HOM05D007677 ORTHO05D009728 3.6e-37 158.7 149 53.7
Thhalv10021653m.g Eutrema salsugineum HOM05D007677 ORTHO05D009728 7.9e-37 157.5 144 50.7
AT3G06145 Arabidopsis thaliana HOM05D007677 ORTHO05D009728 1.0e-36 157.1 146 52.1
TAR362G0152 Trochodendron aralioides HOM05D007677 ORTHO05D009728 2.6e-32 142.5 110 60.9
ATR0626G325 Amborella trichopoda HOM05D007677 ORTHO05D009728 1.9e-30 136.3 126 51.6
SEGI_19260 Sequoiadendron giganteum HOM05D007677 ORTHO05D009728 7.2e-30 134.4 126 52.4
SHI00378 Sapria himalayana HOM05D007677 ORTHO05D009728 9.7e-27 124.0 135 47.4
Lsat_1_v5_gn_7_41320 Lactuca sativa HOM05D007677 ORTHO05D009728 3.4e-24 115.5 68 76.5
Atru.chr4.2568 Acer truncatum HOM05D007677 ORTHO05D009728 3.0e-20 102.4 65 75.4
EL10Ac3g06358 Beta vulgaris HOM05D007677 ORTHO05D009728 5.2e-20 101.7 90 57.8
Potri.010G030701 Populus trichocarpa HOM05D007677 ORTHO05D009728 5.3e-17 91.7 82 62.2
MBI17_g34455_MAGBIO Magnolia biondii HOM05D002055 ORTHO05D002120 9.1e-17 90.9 99 44.4
SEGI_22306 Sequoiadendron giganteum HOM05D007677 ORTHO05D009728 1.7e-15 86.7 112 39.3
SEGI_22697 Sequoiadendron giganteum HOM05D007677 ORTHO05D009728 1.9e-14 83.2 112 39.3


User provided reference genes

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