Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc01g068580.4 Solanum lycopersicum HOM05D006579 ORTHO05D007783 1.1e-133 480.3 299 100.0
Sopen01g030530 Solanum pennellii HOM05D006579 ORTHO05D007783 3.6e-126 455.3 289 98.6
CAN.G179.22 Capsicum annuum HOM05D006579 ORTHO05D007783 4.0e-117 425.2 289 93.1
PGSC0003DMG400000840 Solanum tuberosum HOM05D006579 ORTHO05D007783 6.9e-117 424.5 327 85.3
Nitab4.5_0001628g0050 Nicotiana tabacum HOM05D006579 ORTHO05D007783 3.4e-116 422.2 289 83.4
Nitab4.5_0002103g0080 Nicotiana tabacum HOM05D006579 ORTHO05D007783 3.4e-116 422.2 289 85.5
Dinv33186 Davidia involucrata HOM05D006579 ORTHO05D007783 2.5e-98 362.8 289 76.1
Cc06_g22680 Coffea canephora HOM05D006579 ORTHO05D007783 3.2e-98 362.5 288 68.1
Peaxi162Scf00309g00059 Petunia axillaris HOM05D006579 ORTHO05D007783 2.7e-97 359.4 304 76.3
Ciclev10021552m.g Citrus clementina HOM05D006579 ORTHO05D007783 2.3e-96 356.3 254 74.8
Thecc.01G328000 Theobroma cacao HOM05D006579 ORTHO05D007783 1.1e-95 354.0 290 67.2
Duzib138G1509 Durio zibethinus HOM05D006579 ORTHO05D007783 1.9e-95 353.2 290 67.2
COL.COLO4_23096 Corchorus olitorius HOM05D006579 ORTHO05D007783 5.7e-95 351.7 289 67.1
Glyma.02G006400 Glycine max HOM05D006579 ORTHO05D007783 7.4e-95 351.3 296 65.5
Gohir.D11G111000 Gossypium hirsutum HOM05D006579 ORTHO05D007783 9.7e-95 350.9 286 67.8
Potri.014G110200 Populus trichocarpa HOM05D006579 ORTHO05D007783 1.3e-94 350.5 290 67.6
Gorai.007G118800 Gossypium raimondii HOM05D006579 ORTHO05D007783 1.6e-94 350.1 286 67.8
Manes.14G164500 Manihot esculenta HOM05D006579 ORTHO05D007783 2.2e-94 349.7 290 72.4
Oeu038082.1 Olea europaea HOM05D006579 ORTHO05D007783 1.8e-93 346.7 288 67.0
Phvul.007G207700 Phaseolus vulgaris HOM05D006579 ORTHO05D007783 3.1e-93 345.9 299 70.9
Gohir.A11G106100 Gossypium hirsutum HOM05D006579 ORTHO05D007783 1.5e-92 343.6 286 67.5
Lj5g0006855 Lotus japonicus HOM05D006579 ORTHO05D007783 4.5e-92 342.0 299 65.2
DCAR_018237 Daucus carota HOM05D006579 ORTHO05D007783 7.7e-92 341.3 286 70.3
Glyma.10G140000 Glycine max HOM05D006579 ORTHO05D007783 1.3e-91 340.5 257 72.0
HanXRQChr01g0017841 Helianthus annuus HOM05D006579 ORTHO05D007783 1.3e-91 340.5 301 65.8
Aqoxy2G02395 Aquilegia oxysepala HOM05D006579 ORTHO05D007783 5.0e-91 338.6 297 70.7
Nn8g39570 Nelumbo nucifera HOM05D006579 ORTHO05D007783 5.0e-91 338.6 289 65.7
Ca_10226_v3 Cicer arietinum L. HOM05D006579 ORTHO05D007783 8.5e-91 337.8 289 65.4
VMungo0720G0607 Vigna mungo HOM05D006579 ORTHO05D007783 1.1e-90 337.4 257 72.0
ECA248G0873 Erigeron canadensis HOM05D006579 ORTHO05D007783 1.9e-90 336.7 297 65.3
THA.LOC104825921 Tarenaya hassleriana HOM05D006579 ORTHO05D007783 2.5e-90 336.3 293 66.2
arahy.Tifrunner.gnm1.ann1.3317JQ Arachis hypogaea HOM05D006579 ORTHO05D007783 4.2e-90 335.5 257 72.0
arahy.Tifrunner.gnm1.ann1.E1WP71 Arachis hypogaea HOM05D006579 ORTHO05D007783 9.4e-90 334.3 257 71.6
Lalb_Chr06g0167181 Lupinus albus HOM05D006579 ORTHO05D007783 1.6e-89 333.6 298 67.4
Medtr1g085470 Medicago truncatula HOM05D006579 ORTHO05D007783 2.1e-89 333.2 291 69.4
GSVIVG01028219001 Vitis vinifera HOM05D006579 ORTHO05D007783 6.1e-89 331.6 289 67.1
TAR362G0572 Trochodendron aralioides HOM05D006579 ORTHO05D007783 7.9e-89 331.3 255 70.6
Aa31LG1G10170 Aethionema arabicum HOM05D006579 ORTHO05D007783 1.0e-88 330.9 289 70.6
SalBow3G0048 Salvia bowleyana HOM05D006579 ORTHO05D007783 1.4e-88 330.5 288 66.7
TPR.G3075 Trifolium pratense HOM05D006579 ORTHO05D007783 1.4e-88 330.5 293 68.3
Lalb_Chr21g0309921 Lupinus albus HOM05D006579 ORTHO05D007783 1.8e-88 330.1 297 68.0
Carub.0001s0137 Capsella rubella HOM05D006579 ORTHO05D007783 2.3e-88 329.7 294 65.0
PGR042G1939 Punica granatum HOM05D006579 ORTHO05D007783 2.3e-88 329.7 287 63.1
Atru.chr5.832 Acer truncatum HOM05D006579 ORTHO05D007783 3.9e-88 328.9 250 77.2
CSS0004948 Camellia sinensis var. sinensis HOM05D006579 ORTHO05D007783 3.9e-88 328.9 210 81.4
Psat6g157680 Pisum sativum HOM05D006579 ORTHO05D007783 3.9e-88 328.9 291 63.2
ATR0796G267 Amborella trichopoda HOM05D006579 ORTHO05D007783 6.7e-88 328.2 286 65.4
Sabra14G0081200 Salix brachista HOM05D006579 ORTHO05D007783 6.7e-88 328.2 321 60.1
MBI15_g35678_MAGBIO Magnolia biondii HOM05D006579 ORTHO05D007783 1.1e-87 327.4 288 64.9
CARHR001640 Cardamine hirsuta HOM05D006579 ORTHO05D007783 1.5e-87 327.0 294 65.6
QL09p037462 Quercus lobata HOM05D006579 ORTHO05D007783 3.3e-87 325.9 268 69.8
AL1G11660 Arabidopsis lyrata HOM05D006579 ORTHO05D007783 7.4e-87 324.7 294 69.7
Thhalv10008452m.g Eutrema salsugineum HOM05D006579 ORTHO05D007783 1.3e-86 323.9 292 69.9
AT1G02330 Arabidopsis thaliana HOM05D006579 ORTHO05D007783 1.7e-86 323.6 295 69.8
Cfa004929 Carpinus fangiana HOM05D006579 ORTHO05D007783 1.7e-86 323.6 298 61.1
Sp1g01410 Schrenkiella parvula HOM05D006579 ORTHO05D007783 8.2e-86 321.2 293 69.3
CiPaw.07G127500 Carya illinoinensis HOM05D006579 ORTHO05D007783 1.8e-85 320.1 263 68.1
Migut.D00005 Erythranthe guttata HOM05D006579 ORTHO05D007783 1.8e-85 320.1 293 66.2
Eucgr.A00989 Eucalyptus grandis HOM05D006579 ORTHO05D007783 1.8e-85 320.1 284 64.4
ClCG01G007260 Citrullus lanatus HOM05D006579 ORTHO05D007783 3.1e-85 319.3 304 67.8
CsaV3_5G018690 Cucumis sativus L. HOM05D006579 ORTHO05D007783 5.3e-85 318.5 301 67.1
Lsat_1_v5_gn_1_78561 Lactuca sativa HOM05D006579 ORTHO05D007783 5.3e-85 318.5 285 64.2
BcaC05g24612 Brassica carinata HOM05D006579 ORTHO05D007783 6.9e-85 318.2 292 68.5
C05p01100 Brassica napus HOM05D006579 ORTHO05D007783 6.9e-85 318.2 292 68.5
MD17G1285900 Malus domestica HOM05D006579 ORTHO05D007783 6.9e-85 318.2 309 65.4
TWI23G0058 Tripterygium wilfordii HOM05D006579 ORTHO05D007783 2.0e-84 316.6 290 62.1
BolC5t28891H Brassica oleracea HOM05D006579 ORTHO05D007783 2.6e-84 316.2 292 68.2
Cpa.g.sc57.48 Carica papaya HOM05D006579 ORTHO05D007783 2.6e-84 316.2 289 63.0
Hund07814 Selenicereus undatus HOM05D006579 ORTHO05D007783 2.6e-84 316.2 285 62.1
MELO3C005183.2 Cucumis melo HOM05D006579 ORTHO05D007783 3.4e-84 315.8 300 64.7
BraA10t42384Z Brassica rapa HOM05D006579 ORTHO05D007783 5.9e-84 315.1 292 67.8
Prupe.3G000500 Prunus persica HOM05D006579 ORTHO05D007783 5.9e-84 315.1 308 66.9
PSO210G5405 Papaver somniferum HOM05D006579 ORTHO05D007783 1.0e-83 314.3 255 67.8
PSO761G0510 Papaver somniferum HOM05D006579 ORTHO05D007783 1.0e-83 314.3 257 67.3
Sed0009510 Sechium edule HOM05D006579 ORTHO05D007783 1.7e-83 313.5 295 67.1
CANSAT25G2874 Cannabis sativa HOM05D006579 ORTHO05D007783 1.6e-81 307.0 311 58.8
MSTRG.18055 Avicennia marina HOM05D006579 ORTHO05D007783 5.1e-80 302.0 286 65.4
EL10Ac9g20927 Beta vulgaris HOM05D006579 ORTHO05D007783 1.1e-79 300.8 285 60.0
SGA_v2.0_scaffold417G51243 Striga asiatica HOM05D006579 ORTHO05D007783 1.1e-79 300.8 320 58.1
HPP92_026046 Vanilla planifolia HOM05D006579 ORTHO05D007783 1.1e-79 300.8 289 60.9
FvH4_1g26040 Fragaria vesca HOM05D006579 ORTHO05D007783 4.8e-78 295.4 287 59.6
FAN19G0998 Fragaria x ananassa HOM05D006579 ORTHO05D007783 4.8e-78 295.4 287 59.6
FAN28G1483 Fragaria x ananassa HOM05D006579 ORTHO05D007783 2.4e-77 293.1 287 59.6
Sc12g0008270 Simmondsia chinensis HOM05D006579 ORTHO05D007783 3.1e-77 292.7 285 59.3
RcHm_v2.0_Chr3g0485501 Rosa chinensis HOM05D006579 ORTHO05D007783 1.5e-76 290.4 301 55.5
FAN23G1885 Fragaria x ananassa HOM05D006579 ORTHO05D007783 3.8e-75 285.8 291 58.4
FAN23G2819 Fragaria x ananassa HOM05D006579 ORTHO05D007783 3.8e-75 285.8 291 58.4
Hma1.2p1_1372F.1_g278650 Hydrangea macrophylla HOM05D006579 ORTHO05D007783 3.8e-75 285.8 180 83.3
FAN26G1368 Fragaria x ananassa HOM05D006579 ORTHO05D007783 2.1e-73 280.0 316 54.4
Pp3c6_17910 Physcomitrium patens HOM05D006579 ORTHO05D007783 2.7e-73 279.6 289 59.2
Actinidia21333 Actinidia chinensis HOM05D006579 ORTHO05D007783 3.6e-73 279.3 270 60.4
AUR62037602 Chenopodium quinoa HOM05D006579 ORTHO05D007783 4.7e-73 278.9 285 56.1
CSS0018503 Camellia sinensis var. sinensis HOM05D006579 ORTHO05D007783 4.4e-71 272.3 173 82.1
Mapoly0012s0210 Marchantia polymorpha HOM05D006579 ORTHO05D007783 1.3e-70 270.8 295 57.6
Os03g0374100 Oryza sativa ssp. japonica HOM05D006579 ORTHO05D007783 5.3e-69 265.4 289 59.9
Rhsim01G0001200 Rhododendron simsii HOM05D006579 ORTHO05D007783 6.5e-67 258.5 173 78.6
AagrBONN_evm.TU.Sc2ySwM_117.1030 Anthoceros agrestis HOM05D006579 ORTHO05D007783 1.1e-66 257.7 261 59.8
Zm00001eb018120 Zea mays HOM05D006579 ORTHO05D007783 9.4e-66 254.6 292 54.1
Pp3c5_5390 Physcomitrium patens HOM05D006579 ORTHO05D007783 6.1e-65 251.9 258 58.9
unitig_747.g21528 Utricularia gibba HOM05D006579 ORTHO05D007783 2.2e-62 243.4 290 54.5
SHI19775 Sapria himalayana HOM05D006579 ORTHO05D007783 1.6e-60 237.3 311 49.8
Ah.01g015750 Amaranthus hybridus HOM05D006579 ORTHO05D007783 1.5e-58 230.7 410 40.5
vmacro02350 Vaccinium macrocarpon HOM05D006579 ORTHO05D007783 1.1e-50 204.5 133 80.5
CBR_g3462 Chara braunii HOM05D006579 ORTHO05D007783 1.6e-49 200.7 204 55.4
Lju2566A1G36 Lonicera japonica HOM05D006579 ORTHO05D007783 2.8e-46 189.9 158 68.4
HanXRQChr09g0263751 Helianthus annuus HOM05D006579 ORTHO05D007783 7.8e-44 181.8 182 61.5
HPP92_013492 Vanilla planifolia HOM05D006579 ORTHO05D007783 1.0e-40 171.4 181 57.5
SEGI_25815 Sequoiadendron giganteum HOM05D006579 ORTHO05D007783 9.8e-39 164.9 134 68.7
SMO367G0899 Selaginella moellendorffii HOM05D006579 ORTHO05D007783 3.1e-32 143.3 148 60.1
Haze_05169 Corylus avellana HOM05D006579 ORTHO05D007783 2.9e-30 136.7 167 51.5
Cc00_g21250 Coffea canephora HOM05D006579 ORTHO05D007783 5.4e-29 132.5 77 85.7
AUR62039016 Chenopodium quinoa HOM05D006579 ORTHO05D007783 3.3e-26 123.2 153 49.0
SEGI_10424 Sequoiadendron giganteum HOM05D006579 ORTHO05D007783 9.9e-23 111.7 123 56.1
COL.COLO4_00282 Corchorus olitorius HOM05D006579 ORTHO05D007783 4.6e-20 102.8 116 53.4
Rhsim01G0001100 Rhododendron simsii HOM05D006579 ORTHO05D007783 2.8e-17 93.6 116 50.9
vmacro02349 Vaccinium macrocarpon HOM05D006579 ORTHO05D007783 1.1e-16 91.7 115 48.7
MCO04G420 Micromonas commoda HOM05D006579 ORTHO05D007783 8.9e-16 88.6 94 51.1
Lju2566A1T41 Lonicera japonica HOM05D006579 ORTHO05D007783 8.7e-11 72.0 42 83.3
Lju2566A1T42 Lonicera japonica HOM05D006579 ORTHO05D007783 1.7e-06 57.8 115 41.7


User provided reference genes

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