Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc01g068150.3 Solanum lycopersicum HOM05D006141 ORTHO05D007670 1.2e-99 366.7 218 100.0
Sopen01g030090 Solanum pennellii HOM05D006141 ORTHO05D007670 2.9e-96 355.5 228 86.0
Nitab4.5_0000222g0340 Nicotiana tabacum HOM05D006141 ORTHO05D007670 6.6e-77 291.2 227 71.4
Peaxi162Scf00309g01021 Petunia axillaris HOM05D006141 ORTHO05D007670 1.4e-66 256.9 227 65.2
DCAR_012301 Daucus carota HOM05D006141 ORTHO05D007670 2.0e-65 253.1 222 64.0
Nn4g25355 Nelumbo nucifera HOM05D006141 ORTHO05D007670 5.4e-63 245.0 216 64.4
SGA_v2.0_scaffold417G51257 Striga asiatica HOM05D006141 ORTHO05D007670 1.2e-62 243.8 223 60.5
Rhsim01G0000200 Rhododendron simsii HOM05D006141 ORTHO05D007670 2.3e-61 239.6 227 61.7
Manes.01G234600 Manihot esculenta HOM05D006141 ORTHO05D007670 6.7e-61 238.0 217 62.7
Thecc.01G324800 Theobroma cacao HOM05D006141 ORTHO05D007670 1.1e-60 237.3 222 63.1
Glyma.19G221200 Glycine max HOM05D006141 ORTHO05D007670 1.5e-60 236.9 217 62.2
GSVIVG01028253001 Vitis vinifera HOM05D006141 ORTHO05D007670 1.5e-60 236.9 208 62.5
Cfa004908 Carpinus fangiana HOM05D006141 ORTHO05D007670 1.9e-60 236.5 209 64.1
CSS0000718 Camellia sinensis var. sinensis HOM05D006141 ORTHO05D007670 3.3e-60 235.7 163 76.7
Atru.chr5.866 Acer truncatum HOM05D006141 ORTHO05D007670 9.6e-60 234.2 209 63.6
Potri.014G112900 Populus trichocarpa HOM05D006141 ORTHO05D007670 9.6e-60 234.2 223 61.4
CiPaw.08G082900 Carya illinoinensis HOM05D006141 ORTHO05D007670 2.1e-59 233.0 214 61.7
Ciclev10022224m.g Citrus clementina HOM05D006141 ORTHO05D007670 2.1e-59 233.0 214 62.1
Actinidia20966 Actinidia chinensis HOM05D006141 ORTHO05D007670 2.8e-59 232.6 219 61.2
QL12p034897 Quercus lobata HOM05D006141 ORTHO05D007670 3.6e-59 232.3 209 62.2
TAR362G0148 Trochodendron aralioides HOM05D006141 ORTHO05D007670 3.6e-59 232.3 218 61.5
Duzib138G1179 Durio zibethinus HOM05D006141 ORTHO05D007670 6.2e-59 231.5 222 61.7
Phvul.001G218100 Phaseolus vulgaris HOM05D006141 ORTHO05D007670 8.1e-59 231.1 215 58.6
CANSAT25G1526 Cannabis sativa HOM05D006141 ORTHO05D007670 1.1e-58 230.7 218 60.1
Glyma.03G224200 Glycine max HOM05D006141 ORTHO05D007670 1.8e-58 229.9 216 59.7
TWI59G0338 Tripterygium wilfordii HOM05D006141 ORTHO05D007670 1.8e-58 229.9 214 62.6
Aqoxy2G02498 Aquilegia oxysepala HOM05D006141 ORTHO05D007670 4.0e-58 228.8 218 58.7
Lalb_Chr18g0046401 Lupinus albus HOM05D006141 ORTHO05D007670 9.0e-58 227.6 212 60.4
Migut.D00015 Erythranthe guttata HOM05D006141 ORTHO05D007670 1.2e-57 227.3 220 56.4
FAN19G0972 Fragaria x ananassa HOM05D006141 ORTHO05D007670 2.0e-57 226.5 215 60.9
Gohir.A08G036900 Gossypium hirsutum HOM05D006141 ORTHO05D007670 2.0e-57 226.5 219 60.3
MD17G1284800 Malus domestica HOM05D006141 ORTHO05D007670 2.6e-57 226.1 218 59.2
PGR042G1406 Punica granatum HOM05D006141 ORTHO05D007670 2.6e-57 226.1 220 59.1
Sabra14G0083000 Salix brachista HOM05D006141 ORTHO05D007670 2.6e-57 226.1 215 60.5
MBI18_g10378_MAGBIO Magnolia biondii HOM05D006141 ORTHO05D007670 3.4e-57 225.7 223 58.7
PSO210G0852 Papaver somniferum HOM05D006141 ORTHO05D007670 3.4e-57 225.7 220 57.7
Prupe.3G003000 Prunus persica HOM05D006141 ORTHO05D007670 3.4e-57 225.7 216 59.3
Hma1.2p1_0408F.1_g146310 Hydrangea macrophylla HOM05D006141 ORTHO05D007670 5.8e-57 224.9 218 60.1
VMungo1383G2247 Vigna mungo HOM05D006141 ORTHO05D007670 5.8e-57 224.9 215 58.6
COL.COLO4_23134 Corchorus olitorius HOM05D006141 ORTHO05D007670 7.6e-57 224.6 219 64.4
Cc01_g21800 Coffea canephora HOM05D006141 ORTHO05D007670 9.9e-57 224.2 163 72.4
FAN23G3136 Fragaria x ananassa HOM05D006141 ORTHO05D007670 9.9e-57 224.2 208 61.1
FvH4_1g26260 Fragaria vesca HOM05D006141 ORTHO05D007670 1.3e-56 223.8 214 60.7
Gohir.D08G047500 Gossypium hirsutum HOM05D006141 ORTHO05D007670 1.3e-56 223.8 212 60.4
FAN28G2755 Fragaria x ananassa HOM05D006141 ORTHO05D007670 2.9e-56 222.6 215 60.0
TPR.G2465 Trifolium pratense HOM05D006141 ORTHO05D007670 3.8e-56 222.2 216 58.3
PSO761G0605 Papaver somniferum HOM05D006141 ORTHO05D007670 4.9e-56 221.9 220 56.8
Gorai.004G046700 Gossypium raimondii HOM05D006141 ORTHO05D007670 6.4e-56 221.5 212 60.4
MSTRG.21729 Avicennia marina HOM05D006141 ORTHO05D007670 8.4e-56 221.1 218 56.9
Ca_09244_v3 Cicer arietinum L. HOM05D006141 ORTHO05D007670 1.4e-55 220.3 215 58.1
HanXRQChr06g0167971 Helianthus annuus HOM05D006141 ORTHO05D007670 3.2e-55 219.2 218 57.8
Dinv33165 Davidia involucrata HOM05D006141 ORTHO05D007670 4.2e-55 218.8 217 58.5
Psat3g016880 Pisum sativum HOM05D006141 ORTHO05D007670 9.3e-55 217.6 218 59.6
arahy.Tifrunner.gnm1.ann1.XETR8R Arachis hypogaea HOM05D006141 ORTHO05D007670 1.2e-54 217.2 228 57.0
SalBow6G5482 Salvia bowleyana HOM05D006141 ORTHO05D007670 1.2e-54 217.2 218 56.0
arahy.Tifrunner.gnm1.ann1.YFT3VK Arachis hypogaea HOM05D006141 ORTHO05D007670 1.6e-54 216.9 228 57.9
CDE09G0801 Ceratophyllum demersum HOM05D006141 ORTHO05D007670 2.1e-54 216.5 157 72.6
ECA236G4451 Erigeron canadensis HOM05D006141 ORTHO05D007670 2.1e-54 216.5 214 57.0
arahy.Tifrunner.gnm1.ann1.3ZI6V8 Arachis hypogaea HOM05D006141 ORTHO05D007670 6.0e-54 214.9 233 55.4
Medtr7g110620 Medicago truncatula HOM05D006141 ORTHO05D007670 6.0e-54 214.9 218 59.2
RcHm_v2.0_Chr3g0485921 Rosa chinensis HOM05D006141 ORTHO05D007670 7.9e-54 214.5 229 57.6
AUR62001013 Chenopodium quinoa HOM05D006141 ORTHO05D007670 1.0e-53 214.2 223 56.5
ClCG01G007160 Citrullus lanatus HOM05D006141 ORTHO05D007670 3.9e-53 212.2 209 56.9
FAN26G1012 Fragaria x ananassa HOM05D006141 ORTHO05D007670 8.7e-53 211.1 236 54.7
AUR62004945 Chenopodium quinoa HOM05D006141 ORTHO05D007670 1.9e-52 209.9 223 55.6
MELO3C005194.2 Cucumis melo HOM05D006141 ORTHO05D007670 9.6e-52 207.6 210 56.2
AT3G62140 Arabidopsis thaliana HOM05D006141 ORTHO05D007670 1.3e-51 207.2 220 57.7
CsaV3_5G018600 Cucumis sativus L. HOM05D006141 ORTHO05D007670 2.8e-51 206.1 212 56.1
AL5G44810 Arabidopsis lyrata HOM05D006141 ORTHO05D007670 4.8e-51 205.3 220 57.7
Carub.0005s2889 Capsella rubella HOM05D006141 ORTHO05D007670 8.1e-51 204.5 219 56.2
EL10Ac6g14128 Beta vulgaris HOM05D006141 ORTHO05D007670 1.1e-50 204.1 217 55.3
CARHR172480 Cardamine hirsuta HOM05D006141 ORTHO05D007670 1.8e-50 203.4 213 57.7
HPP92_018284 Vanilla planifolia HOM05D006141 ORTHO05D007670 4.0e-50 202.2 219 53.9
THA.LOC104817433 Tarenaya hassleriana HOM05D006141 ORTHO05D007670 6.9e-50 201.4 217 57.1
Sed0006054 Sechium edule HOM05D006141 ORTHO05D007670 1.5e-49 200.3 209 55.0
Aa31LG10G16170 Aethionema arabicum HOM05D006141 ORTHO05D007670 2.0e-49 199.9 218 54.1
ATR0796G189 Amborella trichopoda HOM05D006141 ORTHO05D007670 2.6e-49 199.5 214 54.7
Thhalv10006233m.g Eutrema salsugineum HOM05D006141 ORTHO05D007670 7.6e-49 198.0 218 55.0
Ah.11g045950 Amaranthus hybridus HOM05D006141 ORTHO05D007670 1.0e-48 197.6 215 55.8
unitig_578.g16642 Utricularia gibba HOM05D006141 ORTHO05D007670 8.4e-48 194.5 163 64.4
Sp5g01230 Schrenkiella parvula HOM05D006141 ORTHO05D007670 1.9e-47 193.4 217 54.4
Rhsim01G0080900 Rhododendron simsii HOM05D006141 ORTHO05D007670 2.1e-46 189.9 162 64.2
Cpa.g.sc57.10 Carica papaya HOM05D006141 ORTHO05D007670 6.0e-46 188.3 125 80.0
C06p28110 Brassica napus HOM05D006141 ORTHO05D007670 2.3e-45 186.4 218 52.8
BolC6t37977H Brassica oleracea HOM05D006141 ORTHO05D007670 2.3e-45 186.4 218 52.8
CAN.G100.55 Capsicum annuum HOM05D006141 ORTHO05D007670 3.9e-45 185.7 117 85.5
Hma1.2p1_0408F.1_g146320 Hydrangea macrophylla HOM05D006141 ORTHO05D007670 1.5e-44 183.7 118 79.7
BcaC07g40706 Brassica carinata HOM05D006141 ORTHO05D007670 2.5e-44 183.0 216 53.2
Os01g0321800 Oryza sativa ssp. japonica HOM05D006141 ORTHO05D007670 5.7e-44 181.8 149 64.4
A07p25870 Brassica napus HOM05D006141 ORTHO05D007670 7.4e-44 181.4 156 62.8
C08p37090 Brassica napus HOM05D006141 ORTHO05D007670 1.6e-43 180.3 213 53.5
BolC8t51287H Brassica oleracea HOM05D006141 ORTHO05D007670 1.6e-43 180.3 213 53.5
A09p54230 Brassica napus HOM05D006141 ORTHO05D007670 2.4e-42 176.4 213 52.6
BraA09t40835Z Brassica rapa HOM05D006141 ORTHO05D007670 2.4e-42 176.4 213 52.6
SEGI_07518 Sequoiadendron giganteum HOM05D006141 ORTHO05D007670 5.3e-42 175.3 212 50.9
Lsat_1_v5_gn_8_167241 Lactuca sativa HOM05D006141 ORTHO05D007670 4.5e-41 172.2 204 52.5
BcaC08g45187 Brassica carinata HOM05D006141 ORTHO05D007670 1.3e-40 170.6 128 71.9
BcaB02g07358 Brassica carinata HOM05D002572 ORTHO05D002800 1.4e-39 167.2 222 47.7
Zm00001eb340460 Zea mays HOM05D006141 ORTHO05D007670 3.2e-39 166.0 125 68.8
Rhsim01G0085900 Rhododendron simsii HOM05D006141 ORTHO05D007670 1.2e-38 164.1 223 46.6
Lj2A1216T56 Lonicera japonica HOM05D006141 ORTHO05D007670 3.4e-33 146.0 82 89.0
Rhsim01G0086800 Rhododendron simsii HOM05D006141 ORTHO05D007670 4.5e-33 145.6 223 45.7
BcaB02g07360 Brassica carinata HOM05D006141 ORTHO05D007670 5.5e-31 138.7 92 78.3
BraA07t30234Z Brassica rapa HOM05D006141 ORTHO05D007670 1.2e-30 137.5 86 81.4
Lj1g0014608 Lotus japonicus HOM05D006141 ORTHO05D007670 4.6e-30 135.6 217 43.3
Ciclev10030079m.g Citrus clementina HOM05D006141 ORTHO05D007670 1.7e-27 127.1 149 51.0
Nitab4.5_0008976g0040 Nicotiana tabacum HOM05D006141 ORTHO05D007670 2.8e-27 126.3 128 57.8
Ciclev10030249m.g Citrus clementina HOM05D006141 ORTHO05D007670 4.8e-27 125.6 149 51.0
Ciclev10030010m.g Citrus clementina HOM05D006141 ORTHO05D007670 3.1e-26 122.9 206 42.2
Pp3c2_35190 Physcomitrium patens HOM05D006141 ORTHO05D007670 2.0e-25 120.2 216 38.0
Mapoly0026s0067 Marchantia polymorpha HOM05D006141 ORTHO05D007670 8.5e-24 114.8 215 40.5
Rhsim01G0082900 Rhododendron simsii HOM05D006141 ORTHO05D007670 6.7e-21 105.1 147 45.6
SHI33165 Sapria himalayana HOM05D006141 ORTHO05D007670 8.2e-19 98.2 126 48.4
Rhsim12G0140700 Rhododendron simsii HOM05D006141 ORTHO05D007670 5.9e-17 92.0 155 46.5
Haze_05144 Corylus avellana HOM05D006141 ORTHO05D007670 3.2e-15 86.3 214 34.6
DCAR_012300 Daucus carota HOM05D006141 ORTHO05D007670 5.2e-13 79.0 46 73.9
Rhsim01G0081900 Rhododendron simsii HOM05D006141 ORTHO05D007670 2.6e-12 76.6 46 84.8
BcaC09g48717 Brassica carinata HOM05D001214 ORTHO05D001029 4.4e-12 75.9 45 84.4
AagrBONN_evm.TU.Sc2ySwM_368.766 Anthoceros agrestis HOM05D006141 ORTHO05D007670 5.7e-12 75.5 152 36.8
CBR_g57079 Chara braunii HOM05D006141 ORTHO05D007670 3.7e-11 72.8 67 56.7
FAN03G1225 Fragaria x ananassa HOM05D006141 ORTHO05D007670 3.7e-11 72.8 44 77.3
Rhsim01G0083000 Rhododendron simsii HOM05D006141 ORTHO05D007670 1.1e-10 71.2 92 48.9
Rhsim01G0082000 Rhododendron simsii HOM05D006141 ORTHO05D007670 1.1e-07 61.2 189 29.6
MCO02G477 Micromonas commoda HOM05D006141 ORTHO05D007670 1.2e-06 57.8 152 31.6
Cre11.g477250 Chlamydomonas reinhardtii HOM05D006141 ORTHO05D007670 3.6e-06 56.2 101 36.6


User provided reference genes

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