Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc01g067820.3 Solanum lycopersicum HOM05D006941 ORTHO05D008361 1.0e-34 149.4 72 100.0
PGSC0003DMG400022846 Solanum tuberosum HOM05D006941 ORTHO05D008361 1.0e-34 149.4 72 100.0
Nitab4.5_0001624g0050 Nicotiana tabacum HOM05D006941 ORTHO05D008361 5.1e-34 147.1 72 98.6
Sopen01g029770 Solanum pennellii HOM05D006941 ORTHO05D008361 5.1e-34 147.1 72 97.2
Peaxi162Scf01067g00024 Petunia axillaris HOM05D006941 ORTHO05D008361 5.3e-31 137.1 69 94.2
CAN.G1327.4 Capsicum annuum HOM05D006941 ORTHO05D008361 4.5e-30 134.0 72 90.3
Actinidia32379 Actinidia chinensis HOM05D006941 ORTHO05D008361 6.5e-29 130.2 70 85.7
CSS0029112 Camellia sinensis var. sinensis HOM05D006941 ORTHO05D008361 8.4e-29 129.8 72 80.6
Oeu029280.1 Olea europaea HOM05D006941 ORTHO05D008361 3.2e-28 127.9 72 86.1
Prupe.1G143700 Prunus persica HOM05D006941 ORTHO05D008361 1.2e-27 125.9 72 81.9
CiPaw.02G087700 Carya illinoinensis HOM05D006941 ORTHO05D008361 4.6e-27 124.0 72 79.2
FAN17G2868 Fragaria x ananassa HOM05D006941 ORTHO05D008361 1.0e-26 122.9 72 80.6
Lj5g0014316 Lotus japonicus HOM05D006941 ORTHO05D008361 1.0e-26 122.9 72 81.9
EL10As5g23584 Beta vulgaris HOM05D006941 ORTHO05D008361 1.3e-26 122.5 70 84.3
PGR004G2827 Punica granatum HOM05D006941 ORTHO05D008361 1.3e-26 122.5 72 80.6
Gorai.005G056700 Gossypium raimondii HOM05D006941 ORTHO05D008361 1.8e-26 122.1 72 80.6
Oeu010965.1 Olea europaea HOM05D006941 ORTHO05D008361 1.8e-26 122.1 72 81.9
FvH4_4g16990 Fragaria vesca HOM05D006941 ORTHO05D008361 3.0e-26 121.3 72 80.6
FAN07G2315 Fragaria x ananassa HOM05D006941 ORTHO05D008361 3.0e-26 121.3 72 80.6
FAN12G1403 Fragaria x ananassa HOM05D006941 ORTHO05D008361 3.0e-26 121.3 72 80.6
FAN12G3786 Fragaria x ananassa HOM05D006941 ORTHO05D008361 3.0e-26 121.3 72 80.6
RcHm_v2.0_Chr4g0420661 Rosa chinensis HOM05D006941 ORTHO05D008361 3.0e-26 121.3 72 80.6
Eucgr.H03682 Eucalyptus grandis HOM05D006941 ORTHO05D008361 3.9e-26 120.9 72 77.8
Gohir.A02G045400 Gossypium hirsutum HOM05D006941 ORTHO05D008361 5.1e-26 120.6 72 79.2
Gohir.D02G051400 Gossypium hirsutum HOM05D006941 ORTHO05D008361 5.1e-26 120.6 72 79.2
HanXRQChr05g0154771 Helianthus annuus HOM05D006941 ORTHO05D008361 5.1e-26 120.6 72 80.6
Phvul.007G158300 Phaseolus vulgaris HOM05D006941 ORTHO05D008361 5.1e-26 120.6 72 79.2
FAN22G2172 Fragaria x ananassa HOM05D006941 ORTHO05D008361 6.7e-26 120.2 72 80.6
Lalb_Chr14g0364951 Lupinus albus HOM05D006941 ORTHO05D008361 6.7e-26 120.2 72 80.6
C08p37290 Brassica napus HOM05D006941 ORTHO05D008361 8.7e-26 119.8 68 83.8
BolC8t51307H Brassica oleracea HOM05D006941 ORTHO05D008361 8.7e-26 119.8 68 83.8
Eucgr.H03704 Eucalyptus grandis HOM05D006941 ORTHO05D008361 1.1e-25 119.4 72 76.4
CARHR172790 Cardamine hirsuta HOM05D006941 ORTHO05D008361 1.5e-25 119.0 69 78.3
Thecc.04G275300 Theobroma cacao HOM05D006941 ORTHO05D008361 1.5e-25 119.0 72 77.8
Atru.chr4.2738 Acer truncatum HOM05D006941 ORTHO05D008361 1.9e-25 118.6 72 79.2
Migut.G00223 Erythranthe guttata HOM05D006941 ORTHO05D008361 1.9e-25 118.6 73 80.8
Rhsim02G0014500 Rhododendron simsii HOM05D006941 ORTHO05D008361 1.9e-25 118.6 72 79.2
SalBow1G8344 Salvia bowleyana HOM05D006941 ORTHO05D008361 1.9e-25 118.6 72 76.4
BcaC07g42761 Brassica carinata HOM05D006941 ORTHO05D008361 2.5e-25 118.2 68 82.4
Ca_09608_v3 Cicer arietinum L. HOM05D006941 ORTHO05D008361 2.5e-25 118.2 72 76.4
Thhalv10006352m.g Eutrema salsugineum HOM05D006941 ORTHO05D008361 2.5e-25 118.2 68 82.4
Psat6g067840 Pisum sativum HOM05D006941 ORTHO05D008361 2.5e-25 118.2 72 76.4
Manes.03G190000 Manihot esculenta HOM05D006941 ORTHO05D008361 3.3e-25 117.9 72 76.4
QL06p006942 Quercus lobata HOM05D006941 ORTHO05D008361 3.3e-25 117.9 71 76.1
Carub.0005s2918 Capsella rubella HOM05D006941 ORTHO05D008361 4.3e-25 117.5 68 79.4
Duzib151G0434 Durio zibethinus HOM05D006941 ORTHO05D008361 4.3e-25 117.5 70 78.6
ECA233G1626 Erigeron canadensis HOM05D006941 ORTHO05D008361 4.3e-25 117.5 72 77.8
Manes.14G117300 Manihot esculenta HOM05D006941 ORTHO05D008361 4.3e-25 117.5 72 77.8
Phvul.010G109000 Phaseolus vulgaris HOM05D006941 ORTHO05D008361 4.3e-25 117.5 72 77.8
Phvul.L002281 Phaseolus vulgaris HOM05D006941 ORTHO05D008361 4.3e-25 117.5 72 77.8
Sp5g00970 Schrenkiella parvula HOM05D006941 ORTHO05D008361 7.4e-25 116.7 68 80.9
Glyma.10G044600 Glycine max HOM05D006941 ORTHO05D008361 9.6e-25 116.3 72 76.4
Glyma.13G132200 Glycine max HOM05D006941 ORTHO05D008361 9.6e-25 116.3 72 76.4
Potri.005G071700 Populus trichocarpa HOM05D006941 ORTHO05D008361 1.3e-24 115.9 72 73.6
TWI09G0325 Tripterygium wilfordii HOM05D006941 ORTHO05D008361 1.3e-24 115.9 72 75.0
Lalb_Chr22g0358511 Lupinus albus HOM05D006941 ORTHO05D008361 2.1e-24 115.2 72 75.0
TWI53G0190 Tripterygium wilfordii HOM05D006941 ORTHO05D008361 2.8e-24 114.8 71 74.6
A09p54410 Brassica napus HOM05D006941 ORTHO05D008361 3.7e-24 114.4 68 77.9
BraA09t40854Z Brassica rapa HOM05D006941 ORTHO05D008361 3.7e-24 114.4 68 77.9
vmacro15274 Vaccinium macrocarpon HOM05D006941 ORTHO05D008361 3.7e-24 114.4 75 76.0
DCAR_030574 Daucus carota HOM05D006941 ORTHO05D008361 6.2e-24 113.6 72 73.6
AT3G62450 Arabidopsis thaliana HOM05D006941 ORTHO05D008361 1.1e-23 112.8 68 76.5
CANSAT78G0092 Cannabis sativa HOM05D006941 ORTHO05D008361 1.1e-23 112.8 72 73.6
AL5G45260 Arabidopsis lyrata HOM05D006941 ORTHO05D008361 1.8e-23 112.1 68 76.5
Medtr1g068580 Medicago truncatula HOM05D006941 ORTHO05D008361 4.0e-23 110.9 65 76.9
arahy.Tifrunner.gnm1.ann1.UB09PE Arachis hypogaea HOM05D006941 ORTHO05D008361 5.3e-23 110.5 71 77.5
unitig_22.g6332 Utricularia gibba HOM05D006941 ORTHO05D008361 6.9e-23 110.2 66 75.8
arahy.Tifrunner.gnm1.ann1.DDI179 Arachis hypogaea HOM05D006941 ORTHO05D008361 9.0e-23 109.8 85 68.2
Aa31LG10G16360 Aethionema arabicum HOM05D006941 ORTHO05D008361 1.5e-22 109.0 65 76.9
Sed0004518 Sechium edule HOM05D006941 ORTHO05D008361 1.5e-22 109.0 73 74.0
THA.LOC104820449 Tarenaya hassleriana HOM05D006941 ORTHO05D008361 1.5e-22 109.0 71 70.4
Medtr2g005070 Medicago truncatula HOM05D006941 ORTHO05D008361 5.8e-22 107.1 64 75.0
PSO302G0016 Papaver somniferum HOM05D006941 ORTHO05D008361 1.3e-21 105.9 69 71.0
Sabra07G0080600 Salix brachista HOM05D006941 ORTHO05D008361 2.2e-21 105.1 82 63.4
BcaB02g07336 Brassica carinata HOM05D006941 ORTHO05D008361 6.5e-21 103.6 61 80.3
Lj4g0022805 Lotus japonicus HOM05D006941 ORTHO05D008361 6.5e-21 103.6 72 73.6
Hund22020 Selenicereus undatus HOM05D006941 ORTHO05D008361 8.4e-21 103.2 70 71.4
Os11g0107450 Oryza sativa ssp. japonica HOM05D006941 ORTHO05D008361 1.1e-20 102.8 68 70.6
PGSC0003DMG400029912 Solanum tuberosum HOM05D006941 ORTHO05D008361 1.9e-20 102.1 51 96.1
SGA_v2.0_scaffold57G20266 Striga asiatica HOM05D006941 ORTHO05D008361 5.5e-20 100.5 101 56.4
Zm00001eb163280 Zea mays HOM05D006941 ORTHO05D008361 7.1e-20 100.1 69 66.7
ClCG06G005480 Citrullus lanatus HOM05D006941 ORTHO05D008361 1.2e-19 99.4 88 60.2
Os12g0106550 Oryza sativa ssp. japonica HOM05D006941 ORTHO05D008361 1.6e-19 99.0 69 69.6
Zm00001eb094170 Zea mays HOM05D006941 ORTHO05D008361 1.6e-19 99.0 70 67.1
SHI00325 Sapria himalayana HOM05D006941 ORTHO05D008361 7.9e-19 96.7 72 65.3
Haze_01039 Corylus avellana HOM05D006941 ORTHO05D008361 5.1e-18 94.0 72 66.7
SEGI_10041 Sequoiadendron giganteum HOM05D006941 ORTHO05D008361 8.7e-18 93.2 70 61.4
HanXRQChr15g0466771 Helianthus annuus HOM05D006941 ORTHO05D008361 1.5e-17 92.4 137 42.3
MD16G1176900 Malus domestica HOM05D006941 ORTHO05D008361 2.5e-17 91.7 52 82.7
VMungo0464G0431 Vigna mungo HOM05D006941 ORTHO05D008361 2.5e-17 91.7 131 42.7
CDE02G1545 Ceratophyllum demersum HOM05D006941 ORTHO05D008361 9.7e-17 89.7 61 65.6
Cfa015511 Carpinus fangiana HOM05D006941 ORTHO05D008361 1.3e-16 89.4 70 62.9
RcHm_v2.0_Chr1g0363231 Rosa chinensis HOM05D006941 ORTHO05D008361 9.0e-15 83.2 50 80.0
BcaC07g40728 Brassica carinata HOM05D006941 ORTHO05D008361 2.5e-12 75.1 68 58.8
Eucgr.H03709 Eucalyptus grandis HOM05D006941 ORTHO05D008361 9.4e-12 73.2 42 78.6
COL.COLO4_13955 Corchorus olitorius HOM05D006941 ORTHO05D008361 1.6e-11 72.4 41 80.5
Ciclev10006724m.g Citrus clementina HOM05D006941 ORTHO05D008361 3.6e-11 71.2 42 73.8
vmacro16859 Vaccinium macrocarpon HOM05D000537 ORTHO05D000415 7.9e-11 70.1 39 79.5
VMungo0720G2266 Vigna mungo HOM05D006941 ORTHO05D008361 1.4e-10 69.3 42 76.2
Sc19g0004830 Simmondsia chinensis HOM05D006941 ORTHO05D008361 3.0e-10 68.2 42 71.4
Lsat_1_v5_gn_2_28060 Lactuca sativa HOM05D006941 ORTHO05D008361 3.9e-10 67.8 41 75.6
SGA_v2.0_scaffold114G31931 Striga asiatica HOM05D006941 ORTHO05D008361 5.1e-10 67.4 51 62.7
Atru.chr2.2418 Acer truncatum HOM05D006941 ORTHO05D008361 2.0e-09 65.5 42 73.8
Sabra05G0058700 Salix brachista HOM05D006941 ORTHO05D008361 2.5e-09 65.1 166 30.1
Actinidia00061 Actinidia chinensis HOM05D006941 ORTHO05D008361 5.7e-09 63.9 30 96.7
Dinv16400 Davidia involucrata HOM05D006941 ORTHO05D008361 5.7e-09 63.9 35 82.9
MSTRG.24772 Avicennia marina HOM05D006941 ORTHO05D008361 9.7e-09 63.2 42 66.7
Medtr2g048470 Medicago truncatula HOM05D006941 ORTHO05D008361 1.7e-08 62.4 36 75.0
Eucgr.H03675 Eucalyptus grandis HOM05D006941 ORTHO05D008361 3.7e-08 61.2 39 66.7
Oeu048197.1 Olea europaea HOM05D010625 ORTHO05D008361 1.8e-07 58.9 41 65.9
AagrBONN_evm.TU.Sc2ySwM_344.628 Anthoceros agrestis HOM05D006941 ORTHO05D008361 5.3e-07 57.4 45 57.8
Eucgr.H03674 Eucalyptus grandis HOM05D025724 ORTHO05D008361 6.9e-07 57.0 35 74.3
HanXRQChr10g0285751 Helianthus annuus HOM05D006941 ORTHO05D008361 6.9e-07 57.0 31 83.9
Mapoly0142s0032 Marchantia polymorpha HOM05D006941 ORTHO05D008361 2.6e-06 55.1 53 56.6
Pp3c4_20400 Physcomitrium patens HOM05D006941 ORTHO05D008361 2.6e-06 55.1 40 60.0
Hma1.2p1_0643F.1_g194720 Hydrangea macrophylla HOM05D006941 ORTHO05D008361 5.9e-06 53.9 37 70.3


User provided reference genes

Program Settings